Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Hoxa6

Gene Name Gene ID Reads Annotation
Hoxa6 ENSMUSG00000043219 83 homeobox A6 [Source:MGI Symbol;Acc:MGI:96178]







Genes with expression patterns similar to Hoxa6

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hoxa6 ENSMUSG00000043219 83 6 1.000 1.000 1.000 1.000 1.000 1.000 homeobox A6 [Source:MGI Symbol;Acc:MGI:96178]
2. 5330439K02Rik ENSMUSG00000097827 13 1.914 - - 0.984 - - 0.930 RIKEN cDNA 5330439K02 gene [Source:MGI Symbol;Acc:MGI:1925532]
3. 1700001O22Rik ENSMUSG00000044320 7 1 - - - - - 1.000 RIKEN cDNA 1700001O22 gene [Source:MGI Symbol;Acc:MGI:1923631]
4. Gm22806 ENSMUSG00000064672 11 0.985 - - 0.985 - - - predicted gene, 22806 [Source:MGI Symbol;Acc:MGI:5452583]
5. Gm10715 ENSMUSG00000096201 18 0.985 - - 0.985 - - - predicted gene 10715 [Source:MGI Symbol;Acc:MGI:3642376]
6. Gm26704 ENSMUSG00000097875, ENSMUSG00000116724 9 0.985 - - 0.985 - - - predicted gene, 26704 [Source:MGI Symbol;Acc:MGI:5477198]
7. Abcg3 ENSMUSG00000029299 9 0.985 - - 0.985 - - - ATP binding cassette subfamily G member 3 [Source:MGI Symbol;Acc:MGI:1351624]
8. Gm25933 ENSMUSG00000095876 6 0.985 - - 0.985 - - - predicted gene, 25933 [Source:MGI Symbol;Acc:MGI:5455710]
9. Gm25348 ENSMUSG00000089586 11 0.984 - - 0.984 - - - predicted gene, 25348 [Source:MGI Symbol;Acc:MGI:5455125]
10. Mir1983 ENSMUSG00000088148 63 0.979 - - 0.979 - - - microRNA 1983 [Source:MGI Symbol;Acc:MGI:3837223]
11. Gm11630 ENSMUSG00000086917 9 0.979 - - 0.979 - - - predicted gene 11630 [Source:MGI Symbol;Acc:MGI:3650475]
12. Prr16 ENSMUSG00000073565 31 0.978 - - 0.978 - - - proline rich 16 [Source:MGI Symbol;Acc:MGI:1918623]
13. Ccdc11 Ccdc11 17 0.978 - - 0.978 - - -
14. Gm13961 ENSMUSG00000084094 26 0.978 - - 0.978 - - - predicted gene 13961 [Source:MGI Symbol;Acc:MGI:3650627]
15. Tlr7 ENSMUSG00000044583 11 0.975 - - 0.975 - - - toll-like receptor 7 [Source:MGI Symbol;Acc:MGI:2176882]
16. Arfgap2 ENSMUSG00000027255 8 0.975 - - 0.975 - - - ADP-ribosylation factor GTPase activating protein 2 [Source:MGI Symbol;Acc:MGI:1924288]
17. Gm5921 ENSMUSG00000074034 52 0.972 - - 0.972 - - - predicted gene 5921 [Source:MGI Symbol;Acc:MGI:3648968]
18. Gm25291 ENSMUSG00000084744 16 0.972 - - 0.972 - - - predicted gene, 25291 [Source:MGI Symbol;Acc:MGI:5455068]
19. Tbx1 ENSMUSG00000009097 77 0.971 - - 0.971 - - - T-box 1 [Source:MGI Symbol;Acc:MGI:98493]
20. Gm3150 ENSMUSG00000096173 83 0.97 - - 0.970 - - - predicted gene 3150 [Source:MGI Symbol;Acc:MGI:3781329]
21. Gm26734 ENSMUSG00000097460 45 0.969 - - 0.969 - - - predicted gene, 26734 [Source:MGI Symbol;Acc:MGI:5477228]
22. Vps13c ENSMUSG00000035284 230 0.969 - - 0.969 - - - vacuolar protein sorting 13C [Source:MGI Symbol;Acc:MGI:2444207]
23. Mal ENSMUSG00000027375 39 0.967 - - 0.967 - - - myelin and lymphocyte protein, T cell differentiation protein [Source:MGI Symbol;Acc:MGI:892970]
24. Znf41-ps ENSMUSG00000084350 36 0.962 - - 0.962 - - - ZNF41, pseudogene [Source:MGI Symbol;Acc:MGI:1917255]
25. Rasgrf2 ENSMUSG00000021708 16 0.962 - - 0.962 - - - RAS protein-specific guanine nucleotide-releasing factor 2 [Source:MGI Symbol;Acc:MGI:109137]
26. Zfp58 ENSMUSG00000071291 34 0.962 - - 0.962 - - - zinc finger protein 58 [Source:MGI Symbol;Acc:MGI:99205]
27. Aim1l 28 0.961 - - 0.961 - - - absent in melanoma 1-like, transcript variant X4
28. Zfp54 ENSMUSG00000023882 41 0.961 - - 0.961 - - - zinc finger protein 54 [Source:MGI Symbol;Acc:MGI:99201]
29. Gm16283 ENSMUSG00000087020 28 0.961 - - 0.961 - - - predicted gene 16283 [Source:MGI Symbol;Acc:MGI:3826591]
30. Kcnd2 ENSMUSG00000060882 118 0.959 - - 0.959 - - - potassium voltage-gated channel, Shal-related family, member 2 [Source:MGI Symbol;Acc:MGI:102663]
31. Evi2a ENSMUSG00000078771 27 0.958 - - 0.958 - - - ecotropic viral integration site 2a [Source:MGI Symbol;Acc:MGI:95458]
32. Gjb6 ENSMUSG00000040055 80 0.955 - - 0.955 - - - gap junction protein, beta 6 [Source:MGI Symbol;Acc:MGI:107588]
33. Snx11 ENSMUSG00000020876 41 0.953 - - 0.953 - - - sorting nexin 11 [Source:MGI Symbol;Acc:MGI:1921729]
34. Pde1a ENSMUSG00000059173 184 0.951 - - 0.951 - - - phosphodiesterase 1A, calmodulin-dependent [Source:MGI Symbol;Acc:MGI:1201792]
35. Gm20696 ENSMUSG00000030068 92 0.95 - - 0.950 - - - predicted gene 20696 [Source:MGI Symbol;Acc:MGI:5313143]
36. Ampd3 ENSMUSG00000005686 113 0.949 - - 0.949 - - - adenosine monophosphate deaminase 3 [Source:MGI Symbol;Acc:MGI:1096344]
37. Plcl1 ENSMUSG00000038349 34 0.949 - - 0.949 - - - phospholipase C-like 1 [Source:MGI Symbol;Acc:MGI:3036262]
38. Cabyr ENSMUSG00000024430 7 0.949 - - - - - 0.949 calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) [Source:MGI Symbol;Acc:MGI:1918382]
39. 4930426D05Rik ENSMUSG00000043168 40 0.947 - - 0.947 - - - RIKEN cDNA 4930426D05 gene [Source:MGI Symbol;Acc:MGI:1921894]
40. Lhfpl1 ENSMUSG00000041700 92 0.947 - - 0.947 - - - lipoma HMGIC fusion partner-like 1 [Source:MGI Symbol;Acc:MGI:1891214]
41. Apobec3 ENSMUSG00000009585 138 0.946 - - 0.946 - - - apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 [Source:MGI Symbol;Acc:MGI:1933111]
42. Adrm1 ENSMUSG00000039041 219 0.946 - - 0.946 - - - adhesion regulating molecule 1 [Source:MGI Symbol;Acc:MGI:1929289]
43. Taco1 ENSMUSG00000001983 63 0.945 - - 0.945 - - - translational activator of mitochondrially encoded cytochrome c oxidase I [Source:MGI Symbol;Acc:MGI:1917457]
44. Ptar1 ENSMUSG00000074925 115 0.942 - - 0.942 - - - protein prenyltransferase alpha subunit repeat containing 1 [Source:MGI Symbol;Acc:MGI:1921875]
45. Clcnka ENSMUSG00000033770 16 0.94 - - 0.940 - - - chloride channel, voltage-sensitive Ka [Source:MGI Symbol;Acc:MGI:1329026]
46. 2700081L22Rik 2700081L22Rik 44 0.939 - - 0.939 - - -
47. Gm14138 ENSMUSG00000081572 36 0.937 - - 0.937 - - - predicted gene 14138 [Source:MGI Symbol;Acc:MGI:3649496]
48. Gm4462 ENSMUSG00000090319 36 0.937 - - 0.937 - - - predicted gene 4462 [Source:MGI Symbol;Acc:MGI:3782646]
49. Fam35a 250 0.936 - - 0.936 - - - family with sequence similarity 35, member A, transcript variant X8
50. Pcdh10 ENSMUSG00000049100 172 0.932 - - 0.932 - - - protocadherin 10 [Source:MGI Symbol;Acc:MGI:1338042]
51. B130006D01Rik ENSMUSG00000075596 183 0.931 - - 0.931 - - - RIKEN cDNA B130006D01 gene [Source:MGI Symbol;Acc:MGI:2444371]
52. Oxgr1 ENSMUSG00000044819 1 0.93 - - - - - 0.930 oxoglutarate (alpha-ketoglutarate) receptor 1 [Source:MGI Symbol;Acc:MGI:2685145]
53. Gm17415 ENSMUSG00000090489 5 0.93 - - - - - 0.930 predicted gene, 17415 [Source:MGI Symbol;Acc:MGI:4937049]
54. C230012O17Rik ENSMUSG00000046219 27 0.93 - - - - - 0.930 RIKEN cDNA C230012O17 gene [Source:MGI Symbol;Acc:MGI:2442283]
55. Gm23547 ENSMUSG00000088835 11 0.93 - - - - - 0.930 predicted gene, 23547 [Source:MGI Symbol;Acc:MGI:5453324]
56. Gm13185 ENSMUSG00000085205 1 0.93 - - - - - 0.930 predicted gene 13185 [Source:MGI Symbol;Acc:MGI:3651411]
57. Gm19203 ENSMUSG00000092376 1 0.93 - - - - - 0.930 predicted gene, 19203 [Source:MGI Symbol;Acc:MGI:5011388]
58. Gm5903 ENSMUSG00000082988 11 0.93 - - - - - 0.930 predicted gene 5903 [Source:MGI Symbol;Acc:MGI:3644470]
59. Gm13009 ENSMUSG00000082877 1 0.93 - - - - - 0.930 predicted gene 13009 [Source:MGI Symbol;Acc:MGI:3651086]
60. Ttc16 ENSMUSG00000039021 4 0.93 - - - - - 0.930 tetratricopeptide repeat domain 16 [Source:MGI Symbol;Acc:MGI:2443048]
61. Gm11867 ENSMUSG00000087402 6 0.93 - - - - - 0.930 predicted gene 11867 [Source:MGI Symbol;Acc:MGI:3650506]
62. Spocd1 ENSMUSG00000028784 6 0.93 - - - - - 0.930 SPOC domain containing 1 [Source:MGI Symbol;Acc:MGI:3652045]
63. Gm5766 ENSMUSG00000089645 11 0.93 - - - - - 0.930 predicted gene 5766 [Source:MGI Symbol;Acc:MGI:3643508]
64. Gm5356 ENSMUSG00000069962 9 0.93 - - - - - 0.930 predicted pseudogene 5356 [Source:MGI Symbol;Acc:MGI:3643649]
65. Nkx2-2os ENSMUSG00000086509, ENSMUSG00000098763 1 0.93 - - - - - 0.930 NK2 homeobox 2, opposite strand [Source:MGI Symbol;Acc:MGI:3652259]
66. Gm20661 ENSMUSG00000079323 3 0.93 - - - - - 0.930 predicted gene 20661 [Source:MGI Symbol;Acc:MGI:5313108]
67. Ccr6 ENSMUSG00000040899 2 0.93 - - - - - 0.930 chemokine (C-C motif) receptor 6 [Source:MGI Symbol;Acc:MGI:1333797]
68. Klhl10 ENSMUSG00000001558 15 0.93 - - - - - 0.930 kelch-like 10 [Source:MGI Symbol;Acc:MGI:2181067]
69. Gm5741 ENSMUSG00000095845 17 0.93 - - - - - 0.930 predicted gene 5741 [Source:MGI Symbol;Acc:MGI:3645690]
70. Hoxa13 ENSMUSG00000038203 2 0.93 - - - - - 0.930 homeobox A13 [Source:MGI Symbol;Acc:MGI:96173]
71. MIMT1 MIMT1 23 0.93 - - - - - 0.930
72. 3110079O15Rik 1 0.93 - - - - - 0.930 RIKEN cDNA 3110079O15 gene, transcript variant X1
73. Ldhc ENSMUSG00000030851 2 0.93 - - - - - 0.930 lactate dehydrogenase C [Source:MGI Symbol;Acc:MGI:96764]
74. 4930505H01Rik 4930505H01Rik 1 0.93 - - - - - 0.930
75. Rps13-ps4 ENSMUSG00000081378 19 0.93 - - - - - 0.930 ribosomal protein S13, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3648822]
76. 4930583P06Rik ENSMUSG00000086954 1 0.93 - - - - - 0.930 RIKEN cDNA 4930583P06 gene [Source:MGI Symbol;Acc:MGI:1923196]
77. Pln ENSMUSG00000038583 2 0.93 - - - - - 0.930 phospholamban [Source:MGI Symbol;Acc:MGI:97622]
78. C030010L15Rik ENSMUSG00000097874 11 0.93 - - - - - 0.930 RIKEN cDNA C030010L15 gene [Source:MGI Symbol;Acc:MGI:1924562]
79. Kctd17 ENSMUSG00000033287 12 0.93 - - - - - 0.930 potassium channel tetramerisation domain containing 17 [Source:MGI Symbol;Acc:MGI:1920094]
80. Vwa5a ENSMUSG00000023186 304 0.928 - - 0.928 - - - von Willebrand factor A domain containing 5A [Source:MGI Symbol;Acc:MGI:1915026]
81. 1700007K13Rik ENSMUSG00000026831 52 0.926 - - 0.926 - - - RIKEN cDNA 1700007K13 gene [Source:MGI Symbol;Acc:MGI:1916577]
82. Crym ENSMUSG00000030905 71 0.926 - - 0.926 - - - crystallin, mu [Source:MGI Symbol;Acc:MGI:102675]
83. Rapgef5 ENSMUSG00000041992 56 0.924 - - 0.924 - - - Rap guanine nucleotide exchange factor (GEF) 5 [Source:MGI Symbol;Acc:MGI:2444365]
84. Fau ENSMUSG00000038274 25 0.923 - - 0.923 - - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) [Source:MGI Symbol;Acc:MGI:102547]
85. Pex12 ENSMUSG00000018733 304 0.922 - - 0.922 - - - peroxisomal biogenesis factor 12 [Source:MGI Symbol;Acc:MGI:2144177]
86. Zfp551 ENSMUSG00000034071 101 0.921 - - 0.921 - - - zinc fingr protein 551 [Source:MGI Symbol;Acc:MGI:3588205]
87. Ccnb2-ps ENSMUSG00000083718 83 0.921 - - 0.921 - - - cyclin B2, pseudogene [Source:MGI Symbol;Acc:MGI:3779896]
88. Gm6211 ENSMUSG00000091577 43 0.912 - - 0.912 - - - predicted gene 6211 [Source:MGI Symbol;Acc:MGI:3646534]
89. 2810433D01Rik ENSMUSG00000086283 23 0.912 - - 0.912 - - - RIKEN cDNA 2810433D01 gene [Source:MGI Symbol;Acc:MGI:1924382]
90. Tle6 ENSMUSG00000034758 116 0.909 - - 0.909 - - - transducin-like enhancer of split 6 [Source:MGI Symbol;Acc:MGI:2149593]
91. Ctf2 ENSMUSG00000060034 240 0.909 - - 0.909 - - - cardiotrophin 2 [Source:MGI Symbol;Acc:MGI:2684607]
92. Gm5258 ENSMUSG00000091806 123 0.908 - - 0.908 - - - predicted gene 5258 [Source:MGI Symbol;Acc:MGI:3647794]
93. Rnf135 ENSMUSG00000020707 98 0.908 - - 0.908 - - - ring finger protein 135 [Source:MGI Symbol;Acc:MGI:1919206]
94. Aatk ENSMUSG00000025375 43 0.907 - - 0.907 - - - apoptosis-associated tyrosine kinase [Source:MGI Symbol;Acc:MGI:1197518]
95. A730017L22Rik ENSMUSG00000085566 146 0.904 - - 0.904 - - - RIKEN cDNA A730017L22 gene [Source:MGI Symbol;Acc:MGI:3584452]
96. Fstl4 ENSMUSG00000036264 74 0.902 - - 0.902 - - - follistatin-like 4 [Source:MGI Symbol;Acc:MGI:2443199]
97. Nipal1 ENSMUSG00000067219 50 0.902 - - 0.902 - - - NIPA-like domain containing 1 [Source:MGI Symbol;Acc:MGI:1917951]
98. Fgf8 ENSMUSG00000025219 27 0.899 - - 0.899 - - - fibroblast growth factor 8 [Source:MGI Symbol;Acc:MGI:99604]
99. RP23-51O3.6 RP23-51O3.6 2 0.896 - - - - - 0.896
100. Pak6 ENSMUSG00000074923 22 0.891 - - - - - 0.891 p21 (RAC1) activated kinase 6 [Source:MGI Symbol;Acc:MGI:2679420]

There are 219 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA