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Results for Hoxa3

Gene Name Gene ID Reads Annotation
Hoxa3 ENSMUSG00000079560 57 homeobox A3 [Source:MGI Symbol;Acc:MGI:96175]







Genes with expression patterns similar to Hoxa3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hoxa3 ENSMUSG00000079560 57 6 1.000 1.000 1.000 1.000 1.000 1.000 homeobox A3 [Source:MGI Symbol;Acc:MGI:96175]
2. Gm15366 ENSMUSG00000080726 11 1.806 - - 0.892 - - 0.914 predicted gene 15366 [Source:MGI Symbol;Acc:MGI:3709611]
3. Capn15 ENSMUSG00000037326 23 1.705 - - 0.791 - - 0.914 calpain 15 [Source:MGI Symbol;Acc:MGI:1355075]
4. 6230400D17Rik ENSMUSG00000097577 51 1.6 - - 0.793 - - 0.807 RIKEN cDNA 6230400D17 gene [Source:MGI Symbol;Acc:MGI:1923383]
5. Scarna13 ENSMUSG00000088789 9 0.966 - - 0.966 - - - small Cajal body-specific RNA 1 [Source:MGI Symbol;Acc:MGI:4360027]
6. Jakmip1 ENSMUSG00000063646, ENSMUSG00000113373 41 0.946 - - 0.946 - - - novel protein
7. Gm26606 ENSMUSG00000097337 23 0.924 - - - - - 0.924 predicted gene, 26606 [Source:MGI Symbol;Acc:MGI:5477100]
8. Hist1h2ad ENSMUSG00000071478 18 0.92 - - - - - 0.920 histone cluster 1, H2ad [Source:MGI Symbol;Acc:MGI:2448289]
9. Scnn1g ENSMUSG00000000216 14 0.917 - - - - - 0.917 sodium channel, nonvoltage-gated 1 gamma [Source:MGI Symbol;Acc:MGI:104695]
10. Gm27001 ENSMUSG00000097963 3 0.914 - - - - - 0.914 predicted gene, 27001 [Source:MGI Symbol;Acc:MGI:5504116]
11. 3110099E03Rik ENSMUSG00000085582 57 0.914 - - - - - 0.914 RIKEN cDNA 3110099E03 gene [Source:MGI Symbol;Acc:MGI:1925761]
12. Rpl17-ps5 ENSMUSG00000081855 19 0.914 - - - - - 0.914 ribosomal protein L17, pseudogene 5 [Source:MGI Symbol;Acc:MGI:3704246]
13. Avpr1b ENSMUSG00000026432 4 0.914 - - - - - 0.914 arginine vasopressin receptor 1B [Source:MGI Symbol;Acc:MGI:1347010]
14. Rplp0-ps1 ENSMUSG00000081640 5 0.914 - - - - - 0.914 ribosomal protein, large, P0, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3648599]
15. Gm2108 ENSMUSG00000092031 8 0.914 - - - - - 0.914 predicted gene 2108 [Source:MGI Symbol;Acc:MGI:3780276]
16. Plcd4 ENSMUSG00000026173 6 0.914 - - - - - 0.914 phospholipase C, delta 4 [Source:MGI Symbol;Acc:MGI:107469]
17. Gm13604 ENSMUSG00000083910 10 0.914 - - - - - 0.914 predicted gene 13604 [Source:MGI Symbol;Acc:MGI:3652203]
18. Gm22299 ENSMUSG00000064597, ENSMUSG00000116186 14 0.914 - - - - - 0.914 predicted gene, 22299 [Source:MGI Symbol;Acc:MGI:5452076]
19. Ly6a ENSMUSG00000075602 17 0.914 - - - - - 0.914 lymphocyte antigen 6 complex, locus A [Source:MGI Symbol;Acc:MGI:107527]
20. D5Ertd577e ENSMUSG00000070677 7 0.914 - - - - - 0.914 DNA segment, Chr 5, ERATO Doi 577, expressed [Source:MGI Symbol;Acc:MGI:1261918]
21. Casp4 ENSMUSG00000033538 15 0.909 - - - - - 0.909 caspase 4, apoptosis-related cysteine peptidase [Source:MGI Symbol;Acc:MGI:107700]
22. Gm11615 ENSMUSG00000085083 13 0.907 - - 0.907 - - - predicted gene 11615 [Source:MGI Symbol;Acc:MGI:3652280]
23. Wnt3a ENSMUSG00000009900 70 0.906 - - 0.906 - - - wingless-type MMTV integration site family, member 3A [Source:MGI Symbol;Acc:MGI:98956]
24. Col28a1 ENSMUSG00000068794 6 0.905 - - - - - 0.905 collagen, type XXVIII, alpha 1 [Source:MGI Symbol;Acc:MGI:2685312]
25. Pla2g7 ENSMUSG00000023913 28 0.904 - - 0.904 - - - phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) [Source:MGI Symbol;Acc:MGI:1351327]
26. Ccr9 ENSMUSG00000029530 12 0.902 - - 0.902 - - - chemokine (C-C motif) receptor 9 [Source:MGI Symbol;Acc:MGI:1341902]
27. Hist1h2bg ENSMUSG00000058385 62 0.902 - - 0.902 - - - histone cluster 1, H2bg [Source:MGI Symbol;Acc:MGI:2448386]
28. Gm24611 ENSMUSG00000065206 4 0.902 - - 0.902 - - - predicted gene, 24611 [Source:MGI Symbol;Acc:MGI:5454388]
29. Atoh1 ENSMUSG00000073043 396 0.902 - - 0.902 - - - atonal bHLH transcription factor 1 [Source:MGI Symbol;Acc:MGI:104654]
30. Ddn ENSMUSG00000059213 51 0.902 - - 0.902 - - - dendrin [Source:MGI Symbol;Acc:MGI:108101]
31. Gm12412 ENSMUSG00000083685 7 0.902 - - 0.902 - - - predicted gene 12412 [Source:MGI Symbol;Acc:MGI:3649919]
32. Wnt1 ENSMUSG00000022997 961 0.902 - - 0.902 - - - wingless-type MMTV integration site family, member 1 [Source:MGI Symbol;Acc:MGI:98953]
33. Gm973 ENSMUSG00000047361 11 0.902 - - 0.902 - - - predicted gene 973 [Source:MGI Symbol;Acc:MGI:2685819]
34. Wdr65 Wdr65 40 0.902 - - 0.902 - - -
35. Gm16585 ENSMUSG00000089657 13 0.902 - - 0.902 - - - predicted gene 16585 [Source:MGI Symbol;Acc:MGI:4415005]
36. Vcl ENSMUSG00000021823 49 0.901 - - 0.901 - - - vinculin [Source:MGI Symbol;Acc:MGI:98927]
37. Fbxo2 ENSMUSG00000041556 15 0.901 - - 0.901 - - - F-box protein 2 [Source:MGI Symbol;Acc:MGI:2446216]
38. 3100002H09Rik ENSMUSG00000051219 11 0.901 - - 0.901 - - - RIKEN cDNA 3100002H09 gene [Source:MGI Symbol;Acc:MGI:1917499]
39. 2010315B03Rik ENSMUSG00000074829, ENSMUSG00000098810 29 0.901 - - 0.901 - - - RIKEN cDNA 2010315B03 gene [Source:MGI Symbol;Acc:MGI:1919321]
40. Nlrc4 ENSMUSG00000039193 9 0.9 - - 0.900 - - - NLR family, CARD domain containing 4 [Source:MGI Symbol;Acc:MGI:3036243]
41. Gm11280 ENSMUSG00000085393 24 0.9 - - 0.900 - - - predicted gene 11280 [Source:MGI Symbol;Acc:MGI:3705200]
42. Ddx43 ENSMUSG00000070291 17 0.9 - - 0.900 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:MGI Symbol;Acc:MGI:3642857]
43. Barhl1 ENSMUSG00000026805 447 0.9 - - 0.900 - - - BarH like homeobox 1 [Source:MGI Symbol;Acc:MGI:1859288]
44. AA467197 ENSMUSG00000033213, ENSMUSG00000110868 7 0.9 - - - - - 0.900 expressed sequence AA467197 [Source:MGI Symbol;Acc:MGI:3034182]
45. Kynu ENSMUSG00000026866 84 0.899 - - - - - 0.899 kynureninase (L-kynurenine hydrolase) [Source:MGI Symbol;Acc:MGI:1918039]
46. Hectd2 ENSMUSG00000041180 34 0.899 - - 0.899 - - - HECT domain E3 ubiquitin protein ligase 2 [Source:MGI Symbol;Acc:MGI:2442663]
47. 2310042D19Rik 2310042D19Rik 7 0.897 - - 0.897 - - -
48. Kcna4 ENSMUSG00000042604 14 0.897 - - - - - 0.897 potassium voltage-gated channel, shaker-related subfamily, member 4 [Source:MGI Symbol;Acc:MGI:96661]
49. Tldc1 ENSMUSG00000034105 8 0.896 - - 0.896 - - - TBC/LysM associated domain containing 1 [Source:MGI Symbol;Acc:MGI:1921597]
50. Gm24049 ENSMUSG00000076364 20 0.894 - - 0.894 - - - predicted gene, 24049 [Source:MGI Symbol;Acc:MGI:5453826]
51. Gm7879 ENSMUSG00000033036 6 0.893 - - - - - 0.893 predicted pseudogene 7879 [Source:MGI Symbol;Acc:MGI:3645078]
52. Gm14634 ENSMUSG00000085891 18 0.891 - - 0.891 - - - predicted gene 14634 [Source:MGI Symbol;Acc:MGI:3705147]
53. Gm7860 ENSMUSG00000082535 15 0.891 - - 0.891 - - - predicted gene 7860 [Source:MGI Symbol;Acc:MGI:3644843]
54. Fn3k ENSMUSG00000025175 18 0.891 - - 0.891 - - - fructosamine 3 kinase [Source:MGI Symbol;Acc:MGI:1926834]
55. Mir138-1 ENSMUSG00000065414 14 0.89 - - - - - 0.890 microRNA 138-1 [Source:MGI Symbol;Acc:MGI:2676823]
56. Rccd1 ENSMUSG00000038930 21 0.889 - - 0.889 - - - RCC1 domain containing 1 [Source:MGI Symbol;Acc:MGI:2444156]
57. Mmp28 ENSMUSG00000020682 22 0.888 - - - - - 0.888 matrix metallopeptidase 28 (epilysin) [Source:MGI Symbol;Acc:MGI:2153062]
58. Cntnap2 ENSMUSG00000039419 230 0.887 - - 0.887 - - - contactin associated protein-like 2 [Source:MGI Symbol;Acc:MGI:1914047]
59. Rxfp2 ENSMUSG00000053368 56 0.887 - - 0.887 - - - relaxin/insulin-like family peptide receptor 2 [Source:MGI Symbol;Acc:MGI:2153463]
60. Zfp663 ENSMUSG00000056824 62 0.887 - - 0.887 - - - zinc finger protein 663 [Source:MGI Symbol;Acc:MGI:2685854]
61. 2900079G21Rik ENSMUSG00000087038 5 0.885 - - - - - 0.885 RIKEN cDNA 2900079G21 gene [Source:MGI Symbol;Acc:MGI:1920268]
62. Rgs9 ENSMUSG00000020599 31 0.883 - - 0.883 - - - regulator of G-protein signaling 9 [Source:MGI Symbol;Acc:MGI:1338824]
63. Gm24616 ENSMUSG00000065208 48 0.88 - - 0.880 - - - predicted gene, 24616 [Source:MGI Symbol;Acc:MGI:5454393]
64. Gm14115 ENSMUSG00000081971 62 0.88 - - - - - 0.880 predicted gene 14115 [Source:MGI Symbol;Acc:MGI:3652261]
65. Klf1 ENSMUSG00000054191 97 0.878 - - - - - 0.878 Kruppel-like factor 1 (erythroid) [Source:MGI Symbol;Acc:MGI:1342771]
66. Snord13 ENSMUSG00000088252 27 0.878 - - - - - 0.878 small nucleolar RNA, C/D box 13 [Source:MGI Symbol;Acc:MGI:3819521]
67. Fam71e1 ENSMUSG00000051113 33 0.878 - - 0.878 - - - family with sequence similarity 71, member E1 [Source:MGI Symbol;Acc:MGI:1922788]
68. Tmem69 ENSMUSG00000055900 851 0.876 - - - - - 0.876 transmembrane protein 69 [Source:MGI Symbol;Acc:MGI:3045357]
69. Gm26801 ENSMUSG00000097892 60 0.873 - - 0.873 - - - predicted gene, 26801 [Source:MGI Symbol;Acc:MGI:5477295]
70. Cav2 ENSMUSG00000000058 36 0.872 - - 0.872 - - - caveolin 2 [Source:MGI Symbol;Acc:MGI:107571]
71. Wnt9a ENSMUSG00000000126 90 0.872 - - 0.872 - - - wingless-type MMTV integration site family, member 9A [Source:MGI Symbol;Acc:MGI:2446084]
72. Ap3m2 ENSMUSG00000031539 134 0.871 - - 0.871 - - - adaptor-related protein complex 3, mu 2 subunit [Source:MGI Symbol;Acc:MGI:1929214]
73. 1700030J22Rik ENSMUSG00000031847 46 0.87 - - 0.870 - - - RIKEN cDNA 1700030J22 gene [Source:MGI Symbol;Acc:MGI:1916778]
74. Gm25635 ENSMUSG00000064609 19 0.87 - - 0.870 - - - predicted gene, 25635 [Source:MGI Symbol;Acc:MGI:5455412]
75. Hist1h3b ENSMUSG00000069267 24 0.869 - - 0.869 - - - histone cluster 1, H3b [Source:MGI Symbol;Acc:MGI:2448319]
76. Spag1 ENSMUSG00000037617 387 0.867 - - 0.867 - - - sperm associated antigen 1 [Source:MGI Symbol;Acc:MGI:1349387]
77. Dennd2d ENSMUSG00000027901 12 0.866 - - 0.866 - - - DENN/MADD domain containing 2D [Source:MGI Symbol;Acc:MGI:2181193]
78. Sep-01 Sep-01 32 0.865 - - 0.865 - - -
79. Gm27032 ENSMUSG00000098051 80 0.865 - - 0.865 - - - predicted gene, 27032 [Source:MGI Symbol;Acc:MGI:5504147]
80. Tmc2 ENSMUSG00000060332 36 0.864 - - 0.864 - - - transmembrane channel-like gene family 2 [Source:MGI Symbol;Acc:MGI:2151017]
81. Kcne4 ENSMUSG00000047330 52 0.861 - - 0.861 - - - potassium voltage-gated channel, Isk-related subfamily, gene 4 [Source:MGI Symbol;Acc:MGI:1891125]
82. Gm12840 ENSMUSG00000086320 98 0.861 - - 0.861 - - - predicted gene 12840 [Source:MGI Symbol;Acc:MGI:3650917]
83. Fgf5 ENSMUSG00000029337 249 0.856 - - - - - 0.856 fibroblast growth factor 5 [Source:MGI Symbol;Acc:MGI:95519]
84. Gm16701 ENSMUSG00000097823, ENSMUSG00000102548 29 0.852 - - 0.852 - - - predicted gene, 16701 [Source:MGI Symbol;Acc:MGI:4439625]
85. Rpsa-ps9 ENSMUSG00000082895 35 0.852 - - 0.852 - - - ribosomal protein SA, pseudogene 9 [Source:MGI Symbol;Acc:MGI:3650393]
86. Syp ENSMUSG00000031144 41 0.849 - - 0.849 - - - synaptophysin [Source:MGI Symbol;Acc:MGI:98467]
87. Nfatc2ip ENSMUSG00000030722 920 0.849 - - 0.849 - - - nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein [Source:MGI Symbol;Acc:MGI:1329015]
88. Rassf4 ENSMUSG00000042129 1399 0.848 - - 0.848 - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:MGI Symbol;Acc:MGI:2386853]
89. Pik3r5 ENSMUSG00000020901 40 0.847 - - - - - 0.847 phosphoinositide-3-kinase regulatory subunit 5 [Source:MGI Symbol;Acc:MGI:2443588]
90. Exph5 ENSMUSG00000034584 69 0.846 - - 0.846 - - - exophilin 5 [Source:MGI Symbol;Acc:MGI:2443248]
91. Gm13039 ENSMUSG00000083826 11 0.845 - - 0.845 - - - predicted gene 13039 [Source:MGI Symbol;Acc:MGI:3649997]
92. Igfbpl1 ENSMUSG00000035551 856 0.845 - - 0.845 - - - insulin-like growth factor binding protein-like 1 [Source:MGI Symbol;Acc:MGI:1933198]
93. Zic5 ENSMUSG00000041703 1240 0.844 - - 0.844 - - - zinc finger protein of the cerebellum 5 [Source:MGI Symbol;Acc:MGI:1929518]
94. Rspo3 ENSMUSG00000019880 485 0.843 - - 0.843 - - - R-spondin 3 [Source:MGI Symbol;Acc:MGI:1920030]
95. Asah2 ENSMUSG00000024887 54 0.843 - - - - - 0.843 N-acylsphingosine amidohydrolase 2 [Source:MGI Symbol;Acc:MGI:1859310]
96. Gm24316 ENSMUSG00000096731 75 0.843 - - 0.843 - - - predicted gene, 24316 [Source:MGI Symbol;Acc:MGI:5454093]
97. Dync1i1 ENSMUSG00000029757 144 0.842 - - 0.842 - - - dynein cytoplasmic 1 intermediate chain 1 [Source:MGI Symbol;Acc:MGI:107743]
98. Sim2 ENSMUSG00000062713 63 0.84 - - - - - 0.840 single-minded family bHLH transcription factor 2 [Source:MGI Symbol;Acc:MGI:98307]
99. 1810062O18Rik ENSMUSG00000084925 34 0.839 - - - - - 0.839 RIKEN cDNA 1810062O18 gene [Source:MGI Symbol;Acc:MGI:1922852]
100. Olig3 ENSMUSG00000045591 1049 0.837 - - 0.837 - - - oligodendrocyte transcription factor 3 [Source:MGI Symbol;Acc:MGI:2149955]

There are 138 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA