Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Hnf4a

Gene Name Gene ID Reads Annotation
Hnf4a ENSMUSG00000017950 358 hepatic nuclear factor 4, alpha [Source:MGI Symbol;Acc:MGI:109128]







Genes with expression patterns similar to Hnf4a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hnf4a ENSMUSG00000017950 358 6 1.000 1.000 1.000 1.000 1.000 1.000 hepatic nuclear factor 4, alpha [Source:MGI Symbol;Acc:MGI:109128]
2. Tmem27 76 1.745 - - 0.889 - - 0.856 transmembrane protein 27, transcript variant 1
3. Gm26807 ENSMUSG00000097484 14 1.744 0.904 - - - - 0.840 predicted gene, 26807 [Source:MGI Symbol;Acc:MGI:5477301]
4. Exoc6 ENSMUSG00000053799 141 1.742 - - 0.860 - 0.882 - exocyst complex component 6 [Source:MGI Symbol;Acc:MGI:1351611]
5. Smim6 ENSMUSG00000075420 6 1.737 0.904 - - - - 0.833 small integral membrane protein 6 [Source:MGI Symbol;Acc:MGI:1915778]
6. Gm19967 ENSMUSG00000093858 65 1.698 - - 0.868 - 0.830 - predicted gene, 19967 [Source:MGI Symbol;Acc:MGI:5012152]
7. Cramp1l ENSMUSG00000038002 2785 1.697 - 0.961 0.736 - - - cramped chromatin regulator homolog 1 [Source:MGI Symbol;Acc:MGI:1930190]
8. Mfsd2b ENSMUSG00000037336 122 1.661 - - - 0.811 0.850 - major facilitator superfamily domain containing 2B [Source:MGI Symbol;Acc:MGI:3583946]
9. Lyve1 ENSMUSG00000030787 184 1.643 - - 0.930 0.713 - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:MGI Symbol;Acc:MGI:2136348]
10. St8sia3 ENSMUSG00000056812 268 1.625 - - 0.912 0.713 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [Source:MGI Symbol;Acc:MGI:106019]
11. Foxa1 ENSMUSG00000035451 548 1.595 - - 0.885 0.710 - - forkhead box A1 [Source:MGI Symbol;Acc:MGI:1347472]
12. Akr1c19 ENSMUSG00000071551 132 1.572 - - 0.773 0.799 - - aldo-keto reductase family 1, member C19 [Source:MGI Symbol;Acc:MGI:2653678]
13. Mmd2 ENSMUSG00000039533 56 1.571 - - - 0.776 0.795 - monocyte to macrophage differentiation-associated 2 [Source:MGI Symbol;Acc:MGI:1922354]
14. Ttr ENSMUSG00000061808 1351 1.567 - - - 0.848 0.719 - transthyretin [Source:MGI Symbol;Acc:MGI:98865]
15. Fgb ENSMUSG00000033831 418 1.506 - - - 0.779 0.727 - fibrinogen beta chain [Source:MGI Symbol;Acc:MGI:99501]
16. Alb ENSMUSG00000029368 370 1.496 - - - 0.786 0.710 - albumin [Source:MGI Symbol;Acc:MGI:87991]
17. Stard10 ENSMUSG00000030688 350 1.48 - - 0.763 0.717 - - START domain containing 10 [Source:MGI Symbol;Acc:MGI:1860093]
18. Apom ENSMUSG00000024391 200 1.445 - - - 0.736 0.709 - apolipoprotein M [Source:MGI Symbol;Acc:MGI:1930124]
19. Neurl3 ENSMUSG00000047180 402 1 - 1.000 - - - - neuralized E3 ubiquitin protein ligase 3 [Source:MGI Symbol;Acc:MGI:2429944]
20. Ctse ENSMUSG00000004552 552 1 - 1.000 - - - - cathepsin E [Source:MGI Symbol;Acc:MGI:107361]
21. Nit1 ENSMUSG00000013997 660 1 - 1.000 - - - - nitrilase 1 [Source:MGI Symbol;Acc:MGI:1350916]
22. Mast3 ENSMUSG00000031833, ENSMUSG00000110763 679 1 - 1.000 - - - - microtubule associated serine/threonine kinase 3 [Source:MGI Symbol;Acc:MGI:2683541]
23. Gm22906 ENSMUSG00000092932 830 0.999 - 0.999 - - - - predicted gene, 22906 [Source:MGI Symbol;Acc:MGI:5452683]
24. Jrk ENSMUSG00000046380 696 0.999 - 0.999 - - - - jerky [Source:MGI Symbol;Acc:MGI:106214]
25. Adamts3 ENSMUSG00000043635 540 0.999 - 0.999 - - - - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3 [Source:MGI Symbol;Acc:MGI:3045353]
26. Gm14017 ENSMUSG00000081967 689 0.999 - 0.999 - - - - predicted gene 14017 [Source:MGI Symbol;Acc:MGI:3702155]
27. Zfp825 ENSMUSG00000069208 1108 0.999 - 0.999 - - - - zinc finger protein 825 [Source:MGI Symbol;Acc:MGI:2385315]
28. Plce1 ENSMUSG00000024998 1051 0.999 - 0.999 - - - - phospholipase C, epsilon 1 [Source:MGI Symbol;Acc:MGI:1921305]
29. Gata3 ENSMUSG00000015619 847 0.999 - 0.999 - - - - GATA binding protein 3 [Source:MGI Symbol;Acc:MGI:95663]
30. 1700021K19Rik 1700021K19Rik 830 0.999 - 0.999 - - - -
31. Fbxo33 ENSMUSG00000035329 946 0.999 - 0.999 - - - - F-box protein 33 [Source:MGI Symbol;Acc:MGI:1917861]
32. Lrrfip2 ENSMUSG00000032497 1432 0.998 - 0.998 - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:MGI Symbol;Acc:MGI:1918518]
33. Myo9b ENSMUSG00000004677 902 0.998 - 0.998 - - - - myosin IXb [Source:MGI Symbol;Acc:MGI:106624]
34. Nfatc4 ENSMUSG00000023411 1084 0.998 - 0.998 - - - - nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 4 [Source:MGI Symbol;Acc:MGI:1920431]
35. Map3k2 ENSMUSG00000024383 1064 0.998 - 0.998 - - - - mitogen-activated protein kinase kinase kinase 2 [Source:MGI Symbol;Acc:MGI:1346873]
36. Cep135 ENSMUSG00000036403 1133 0.998 - 0.998 - - - - centrosomal protein 135 [Source:MGI Symbol;Acc:MGI:2681869]
37. Ube4a ENSMUSG00000059890 1421 0.997 - 0.997 - - - - ubiquitination factor E4A [Source:MGI Symbol;Acc:MGI:2154580]
38. Thoc6 ENSMUSG00000041319 1276 0.997 - 0.997 - - - - THO complex 6 [Source:MGI Symbol;Acc:MGI:2677480]
39. Gdpd1 ENSMUSG00000061666 1642 0.997 - 0.997 - - - - glycerophosphodiester phosphodiesterase domain containing 1 [Source:MGI Symbol;Acc:MGI:1913819]
40. Atpaf2 ENSMUSG00000042709 993 0.997 - 0.997 - - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:MGI Symbol;Acc:MGI:2180561]
41. Tox2 ENSMUSG00000074607 717 0.997 - 0.997 - - - - TOX high mobility group box family member 2 [Source:MGI Symbol;Acc:MGI:3611233]
42. Tbc1d9b ENSMUSG00000036644 1557 0.997 - 0.997 - - - - TBC1 domain family, member 9B [Source:MGI Symbol;Acc:MGI:1924045]
43. 0610011F06Rik 1655 0.997 - 0.997 - - - - RIKEN cDNA 0610011F06 gene
44. Fubp3 ENSMUSG00000026843 2442 0.997 - 0.997 - - - - far upstream element (FUSE) binding protein 3 [Source:MGI Symbol;Acc:MGI:2443699]
45. Samd10 ENSMUSG00000038605 1636 0.996 - 0.996 - - - - sterile alpha motif domain containing 10 [Source:MGI Symbol;Acc:MGI:2443872]
46. Vamp2 ENSMUSG00000020894 1819 0.996 - 0.996 - - - - vesicle-associated membrane protein 2 [Source:MGI Symbol;Acc:MGI:1313277]
47. Zfp81 ENSMUSG00000003929 1819 0.996 - 0.996 - - - - zinc finger protein 81 [Source:MGI Symbol;Acc:MGI:1890752]
48. Trafd1 ENSMUSG00000042726 1594 0.996 - 0.996 - - - - TRAF type zinc finger domain containing 1 [Source:MGI Symbol;Acc:MGI:1923551]
49. Gcn1l1 ENSMUSG00000041638 2104 0.995 - 0.995 - - - - GCN1 general control of amino-acid synthesis 1-like 1 (yeast) [Source:MGI Symbol;Acc:MGI:2444248]
50. Pttg1ip ENSMUSG00000009291 2159 0.995 - 0.995 - - - - pituitary tumor-transforming 1 interacting protein [Source:MGI Symbol;Acc:MGI:2652132]
51. Rnf168 ENSMUSG00000014074 2298 0.994 - 0.994 - - - - ring finger protein 168 [Source:MGI Symbol;Acc:MGI:1917488]
52. Papss1 ENSMUSG00000028032 2736 0.994 - 0.994 - - - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:MGI Symbol;Acc:MGI:1330587]
53. Bach1 ENSMUSG00000025612 3433 0.994 - 0.994 - - - - BTB and CNC homology 1, basic leucine zipper transcription factor 1 [Source:MGI Symbol;Acc:MGI:894680]
54. Ccdc9 ENSMUSG00000041375 2256 0.994 - 0.994 - - - - coiled-coil domain containing 9 [Source:MGI Symbol;Acc:MGI:1921443]
55. Gm26905 ENSMUSG00000097695 6535 0.994 - 0.994 - - - - predicted gene, 26905 [Source:MGI Symbol;Acc:MGI:5477399]
56. Uvssa ENSMUSG00000037355 1218 0.994 - 0.994 - - - - UV stimulated scaffold protein A [Source:MGI Symbol;Acc:MGI:1918351]
57. Pfkl ENSMUSG00000020277 2200 0.994 - 0.994 - - - - phosphofructokinase, liver, B-type [Source:MGI Symbol;Acc:MGI:97547]
58. Rab5c ENSMUSG00000019173 2129 0.994 - 0.994 - - - - RAB5C, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:105306]
59. Efna4 ENSMUSG00000028040 2079 0.994 - 0.994 - - - - ephrin A4 [Source:MGI Symbol;Acc:MGI:106643]
60. Sh3bp5 ENSMUSG00000021892 2847 0.994 - 0.994 - - - - SH3-domain binding protein 5 (BTK-associated) [Source:MGI Symbol;Acc:MGI:1344391]
61. Mrps25 ENSMUSG00000014551 1972 0.993 - 0.993 - - - - mitochondrial ribosomal protein S25 [Source:MGI Symbol;Acc:MGI:1928140]
62. Phb2 ENSMUSG00000004264 4535 0.993 - 0.993 - - - - prohibitin 2 [Source:MGI Symbol;Acc:MGI:102520]
63. Baz2a ENSMUSG00000040054 1653 0.992 - 0.992 - - - - bromodomain adjacent to zinc finger domain, 2A [Source:MGI Symbol;Acc:MGI:2151152]
64. Gna12 ENSMUSG00000000149 2886 0.991 - 0.991 - - - - guanine nucleotide binding protein, alpha 12 [Source:MGI Symbol;Acc:MGI:95767]
65. Prpf18 ENSMUSG00000039449 1985 0.99 - 0.990 - - - - pre-mRNA processing factor 18 [Source:MGI Symbol;Acc:MGI:1914479]
66. Gm1673 ENSMUSG00000070858 2674 0.989 - 0.989 - - - - predicted gene 1673 [Source:MGI Symbol;Acc:MGI:2686519]
67. Mapkap1 ENSMUSG00000038696 3140 0.987 - 0.987 - - - - mitogen-activated protein kinase associated protein 1 [Source:MGI Symbol;Acc:MGI:2444554]
68. Tmx3 ENSMUSG00000024614 1503 0.986 - 0.986 - - - - thioredoxin-related transmembrane protein 3 [Source:MGI Symbol;Acc:MGI:2442418]
69. Ubr4 ENSMUSG00000066036 3260 0.986 - 0.986 - - - - ubiquitin protein ligase E3 component n-recognin 4 [Source:MGI Symbol;Acc:MGI:1916366]
70. Ncor2 ENSMUSG00000029478 2488 0.986 - 0.986 - - - - nuclear receptor co-repressor 2 [Source:MGI Symbol;Acc:MGI:1337080]
71. Armcx4 ENSMUSG00000049804 5793 0.986 - 0.986 - - - - armadillo repeat containing, X-linked 4 [Source:MGI Symbol;Acc:MGI:2147887]
72. 8430429K09Rik ENSMUSG00000034587 679 0.985 - 0.985 - - - - RIKEN cDNA 8430429K09 gene [Source:MGI Symbol;Acc:MGI:1918773]
73. A430005L14Rik ENSMUSG00000047613 1070 0.985 - 0.985 - - - - RIKEN cDNA A430005L14 gene [Source:MGI Symbol;Acc:MGI:2140680]
74. Stx16 ENSMUSG00000027522 2813 0.984 - 0.984 - - - - syntaxin 16 [Source:MGI Symbol;Acc:MGI:1923396]
75. Gm5617 ENSMUSG00000042293 688 0.984 - 0.984 - - - - predicted gene 5617 [Source:MGI Symbol;Acc:MGI:3643566]
76. Rmnd5a ENSMUSG00000002222 2290 0.982 - 0.982 - - - - required for meiotic nuclear division 5 homolog A [Source:MGI Symbol;Acc:MGI:1915727]
77. Anxa6 ENSMUSG00000018340 3644 0.982 - 0.982 - - - - annexin A6 [Source:MGI Symbol;Acc:MGI:88255]
78. Tomm40 ENSMUSG00000002984 3250 0.98 - 0.980 - - - - translocase of outer mitochondrial membrane 40 [Source:MGI Symbol;Acc:MGI:1858259]
79. Tbc1d7 ENSMUSG00000021368 930 0.98 - 0.980 - - - - TBC1 domain family, member 7 [Source:MGI Symbol;Acc:MGI:1914296]
80. Trim33 ENSMUSG00000033014 3606 0.98 - 0.980 - - - - tripartite motif-containing 33 [Source:MGI Symbol;Acc:MGI:2137357]
81. Alg11 ENSMUSG00000063362 3651 0.979 - 0.979 - - - - asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) [Source:MGI Symbol;Acc:MGI:2142632]
82. Cpsf3l 1764 0.979 - 0.979 - - - - cleavage and polyadenylation specific factor 3-like, transcript variant X2
83. Sipa1 ENSMUSG00000056917 2263 0.977 - 0.977 - - - - signal-induced proliferation associated gene 1 [Source:MGI Symbol;Acc:MGI:107576]
84. Nup107 ENSMUSG00000052798 3216 0.977 - 0.977 - - - - nucleoporin 107 [Source:MGI Symbol;Acc:MGI:2143854]
85. Eef1e1 ENSMUSG00000001707 2763 0.977 - 0.977 - - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:MGI Symbol;Acc:MGI:1913393]
86. Cwc15 ENSMUSG00000004096 5974 0.977 - 0.977 - - - - CWC15 spliceosome-associated protein [Source:MGI Symbol;Acc:MGI:1913320]
87. Med19 ENSMUSG00000027080 2493 0.976 - 0.976 - - - - mediator complex subunit 19 [Source:MGI Symbol;Acc:MGI:1914234]
88. Matr3 ENSMUSG00000037236 11220 0.976 - 0.976 - - - - matrin 3 [Source:MGI Symbol;Acc:MGI:1298379]
89. Dpp3 ENSMUSG00000063904 4642 0.976 - 0.976 - - - - dipeptidylpeptidase 3 [Source:MGI Symbol;Acc:MGI:1922471]
90. Mast4 ENSMUSG00000034751 3279 0.975 - 0.975 - - - - microtubule associated serine/threonine kinase family member 4 [Source:MGI Symbol;Acc:MGI:1918885]
91. Gm9385 ENSMUSG00000080848 4881 0.971 - 0.971 - - - - predicted pseudogene 9385 [Source:MGI Symbol;Acc:MGI:3646182]
92. Msh6 ENSMUSG00000005370 4347 0.971 - 0.971 - - - - mutS homolog 6 [Source:MGI Symbol;Acc:MGI:1343961]
93. Ffar4 ENSMUSG00000054200 29 0.969 - - 0.969 - - - free fatty acid receptor 4 [Source:MGI Symbol;Acc:MGI:2147577]
94. Rpa2 ENSMUSG00000028884 4921 0.969 - 0.969 - - - - replication protein A2 [Source:MGI Symbol;Acc:MGI:1339939]
95. Snrpa ENSMUSG00000061479 4828 0.966 - 0.966 - - - - small nuclear ribonucleoprotein polypeptide A [Source:MGI Symbol;Acc:MGI:1855690]
96. Gm13292 ENSMUSG00000082424 9265 0.966 - 0.966 - - - - predicted gene 13292 [Source:MGI Symbol;Acc:MGI:3649470]
97. Psmb6 ENSMUSG00000018286 7753 0.965 - 0.965 - - - - proteasome (prosome, macropain) subunit, beta type 6 [Source:MGI Symbol;Acc:MGI:104880]
98. Pepd ENSMUSG00000063931 3963 0.963 - 0.963 - - - - peptidase D [Source:MGI Symbol;Acc:MGI:97542]
99. Ranbp10 ENSMUSG00000037415 1474 0.963 - 0.963 - - - - RAN binding protein 10 [Source:MGI Symbol;Acc:MGI:1921584]
100. Psmc3 ENSMUSG00000002102 7751 0.963 - 0.963 - - - - proteasome (prosome, macropain) 26S subunit, ATPase 3 [Source:MGI Symbol;Acc:MGI:1098754]

There are 540 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA