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Results for Hmgb1-ps6

Gene Name Gene ID Reads Annotation
Hmgb1-ps6 ENSMUSG00000080928 263 high mobility group box 1, pseudogene 6 [Source:MGI Symbol;Acc:MGI:3776507]







Genes with expression patterns similar to Hmgb1-ps6

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hmgb1-ps6 ENSMUSG00000080928 263 5 1.000 1.000 1.000 1.000 1.000 - high mobility group box 1, pseudogene 6 [Source:MGI Symbol;Acc:MGI:3776507]
2. Gm8822 ENSMUSG00000082319 15 1.878 - 0.878 - 1.000 - - predicted gene 8822 [Source:MGI Symbol;Acc:MGI:3648640]
3. Trpv3 ENSMUSG00000043029 4 1.722 - 1.000 - - 0.722 - transient receptor potential cation channel, subfamily V, member 3 [Source:MGI Symbol;Acc:MGI:2181407]
4. 9230105E05Rik ENSMUSG00000090191 5 1 - 1.000 - - - - RIKEN cDNA 9230105E05 gene [Source:MGI Symbol;Acc:MGI:2444388]
5. Gm9839 ENSMUSG00000102865 1 1 - 1.000 - - - - predicted gene 9839 [Source:MGI Symbol;Acc:MGI:3641910]
6. Usp44 ENSMUSG00000020020 12 1 - 1.000 - - - - ubiquitin specific peptidase 44 [Source:MGI Symbol;Acc:MGI:3045318]
7. Gm13675 ENSMUSG00000080979 8 1 - 1.000 - - - - predicted gene 13675 [Source:MGI Symbol;Acc:MGI:3649532]
8. Psmb8 ENSMUSG00000024338 16 1 - 1.000 - - - - proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) [Source:MGI Symbol;Acc:MGI:1346527]
9. Gm16185 ENSMUSG00000084911 290 1 1.000 - - - - - predicted gene 16185 [Source:MGI Symbol;Acc:MGI:3802169]
10. BC006965 ENSMUSG00000041674 5 1 - 1.000 - - - - cDNA sequence BC006965 [Source:MGI Symbol;Acc:MGI:2384955]
11. Gm8898 Gm8898 261 1 1.000 - - - - -
12. Abca16 ENSMUSG00000051900 3 1 - 1.000 - - - - ATP-binding cassette, sub-family A (ABC1), member 16 [Source:MGI Symbol;Acc:MGI:2388711]
13. Gm7361 ENSMUSG00000059645 1 1 - 1.000 - - - - predicted gene 7361 [Source:MGI Symbol;Acc:MGI:3805965]
14. Gm15915 ENSMUSG00000085723 101 1 - 1.000 - - - - predicted gene 15915 [Source:MGI Symbol;Acc:MGI:3801763]
15. Slc6a1 ENSMUSG00000030310 22 1 - 1.000 - - - - solute carrier family 6 (neurotransmitter transporter, GABA), member 1 [Source:MGI Symbol;Acc:MGI:95627]
16. Try5 ENSMUSG00000036938 3 1 - 1.000 - - - - trypsin 5 [Source:MGI Symbol;Acc:MGI:102756]
17. Gm15577 ENSMUSG00000086708 2 1 - 1.000 - - - - predicted gene 15577 [Source:MGI Symbol;Acc:MGI:3783025]
18. Tex37 ENSMUSG00000051896 1 1 - 1.000 - - - - testis expressed 37 [Source:MGI Symbol;Acc:MGI:1921471]
19. 4930544L04Rik ENSMUSG00000073803 4 1 - 1.000 - - - - RIKEN cDNA 4930544L04 gene [Source:MGI Symbol;Acc:MGI:1926057]
20. Gm12511 ENSMUSG00000066176 2 1 - 1.000 - - - - predicted gene 12511 [Source:MGI Symbol;Acc:MGI:3651363]
21. Gm6155 ENSMUSG00000068629 16 1 - 1.000 - - - - predicted pseudogene 6155 [Source:MGI Symbol;Acc:MGI:3643981]
22. Lrriq3 ENSMUSG00000028182 5 1 - 1.000 - - - - leucine-rich repeats and IQ motif containing 3 [Source:MGI Symbol;Acc:MGI:1921685]
23. Itgbl1 ENSMUSG00000032925 2 1 - 1.000 - - - - integrin, beta-like 1 [Source:MGI Symbol;Acc:MGI:2443439]
24. B930082K07Rik ENSMUSG00000097734 272 1 1.000 - - - - - RIKEN cDNA B930082K07 gene [Source:MGI Symbol;Acc:MGI:2445108]
25. Fbxo40 ENSMUSG00000047746 2 1 - 1.000 - - - - F-box protein 40 [Source:MGI Symbol;Acc:MGI:2443753]
26. Ifi203 ENSMUSG00000039997 17 1 - 1.000 - - - - interferon activated gene 203 [Source:MGI Symbol;Acc:MGI:96428]
27. Gm13775 ENSMUSG00000081207 54 1 - 1.000 - - - - predicted gene 13775 [Source:MGI Symbol;Acc:MGI:3712466]
28. RP23-131O4.2 RP23-131O4.2 1 1 - 1.000 - - - -
29. Zc3h12d ENSMUSG00000039981 1 1 - 1.000 - - - - zinc finger CCCH type containing 12D [Source:MGI Symbol;Acc:MGI:3045313]
30. Mnx1 ENSMUSG00000001566 309 1 1.000 - - - - - motor neuron and pancreas homeobox 1 [Source:MGI Symbol;Acc:MGI:109160]
31. Htr1a ENSMUSG00000021721 2 1 - 1.000 - - - - 5-hydroxytryptamine (serotonin) receptor 1A [Source:MGI Symbol;Acc:MGI:96273]
32. 2610044O15Rik8 ENSMUSG00000071302 3 1 - 1.000 - - - - RIKEN cDNA 2610044O15 gene [Source:MGI Symbol;Acc:MGI:1919389]
33. C230029F24Rik ENSMUSG00000051616 132 1 - 1.000 - - - - RIKEN cDNA C230029F24 gene [Source:MGI Symbol;Acc:MGI:3045370]
34. Gm10655 ENSMUSG00000074256 4 1 - 1.000 - - - - predicted gene 10655 [Source:MGI Symbol;Acc:MGI:3642575]
35. Gm11269 ENSMUSG00000086293 1 1 - 1.000 - - - - predicted gene 11269 [Source:MGI Symbol;Acc:MGI:3649855]
36. Gm26355 ENSMUSG00000088845 5 1 - 1.000 - - - - predicted gene, 26355 [Source:MGI Symbol;Acc:MGI:5456132]
37. Gm12762 ENSMUSG00000086526 3 1 - 1.000 - - - - predicted gene 12762 [Source:MGI Symbol;Acc:MGI:3649976]
38. Rpl21-ps3 ENSMUSG00000060566 7 1 - 1.000 - - - - ribosomal protein L21, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3646431]
39. Cyb5r2 ENSMUSG00000048065 10 1 - 1.000 - - - - cytochrome b5 reductase 2 [Source:MGI Symbol;Acc:MGI:2444415]
40. Slc9b1 ENSMUSG00000050150 6 1 - 1.000 - - - - solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1 [Source:MGI Symbol;Acc:MGI:1921696]
41. Ppp1r14a ENSMUSG00000037166 745 0.999 0.999 - - - - - protein phosphatase 1, regulatory inhibitor subunit 14A [Source:MGI Symbol;Acc:MGI:1931139]
42. Aldh4a1 ENSMUSG00000028737 1176 0.999 0.999 - - - - - aldehyde dehydrogenase 4 family, member A1 [Source:MGI Symbol;Acc:MGI:2443883]
43. Dynlt3 ENSMUSG00000031176 901 0.999 0.999 - - - - - dynein light chain Tctex-type 3 [Source:MGI Symbol;Acc:MGI:1914367]
44. Snrnp35 ENSMUSG00000029402 749 0.999 0.999 - - - - - small nuclear ribonucleoprotein 35 (U11/U12) [Source:MGI Symbol;Acc:MGI:1923417]
45. Dclre1a ENSMUSG00000025077 675 0.999 0.999 - - - - - DNA cross-link repair 1A [Source:MGI Symbol;Acc:MGI:1930042]
46. Nfatc2ip ENSMUSG00000030722 920 0.999 0.999 - - - - - nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein [Source:MGI Symbol;Acc:MGI:1329015]
47. Zbtb25 ENSMUSG00000056459 934 0.999 0.999 - - - - - zinc finger and BTB domain containing 25 [Source:MGI Symbol;Acc:MGI:99197]
48. Daam1 ENSMUSG00000034574 933 0.998 0.998 - - - - - dishevelled associated activator of morphogenesis 1 [Source:MGI Symbol;Acc:MGI:1914596]
49. Narf ENSMUSG00000000056 843 0.998 0.998 - - - - - nuclear prelamin A recognition factor [Source:MGI Symbol;Acc:MGI:1914858]
50. Cecr2 ENSMUSG00000071226 2090 0.998 0.998 - - - - - CECR2, histone acetyl-lysine reader [Source:MGI Symbol;Acc:MGI:1923799]
51. Eral1 ENSMUSG00000020832 1059 0.998 0.998 - - - - - Era (G-protein)-like 1 (E. coli) [Source:MGI Symbol;Acc:MGI:1889295]
52. Spin2c ENSMUSG00000046550 850 0.998 0.998 - - - - - spindlin family, member 2C [Source:MGI Symbol;Acc:MGI:3605548]
53. Apeh ENSMUSG00000032590 785 0.998 0.998 - - - - - acylpeptide hydrolase [Source:MGI Symbol;Acc:MGI:88041]
54. Ctsz ENSMUSG00000016256 997 0.998 0.998 - - - - - cathepsin Z [Source:MGI Symbol;Acc:MGI:1891190]
55. Nmrk1 ENSMUSG00000037847 809 0.998 0.998 - - - - - nicotinamide riboside kinase 1 [Source:MGI Symbol;Acc:MGI:2147434]
56. Ercc4 ENSMUSG00000022545 1268 0.997 0.997 - - - - - excision repair cross-complementing rodent repair deficiency, complementation group 4 [Source:MGI Symbol;Acc:MGI:1354163]
57. 9430023L20Rik 9430023L20Rik 1183 0.997 0.997 - - - - -
58. Gde1 ENSMUSG00000033917 2540 0.997 0.997 - - - - - glycerophosphodiester phosphodiesterase 1 [Source:MGI Symbol;Acc:MGI:1891827]
59. Rad51ap1 ENSMUSG00000030346 1698 0.996 0.996 - - - - - RAD51 associated protein 1 [Source:MGI Symbol;Acc:MGI:1098224]
60. Cog4 ENSMUSG00000031753 1640 0.996 0.996 - - - - - component of oligomeric golgi complex 4 [Source:MGI Symbol;Acc:MGI:2142808]
61. Ndufv3 ENSMUSG00000024038 4549 0.996 0.996 - - - - - NADH:ubiquinone oxidoreductase core subunit V3 [Source:MGI Symbol;Acc:MGI:1890894]
62. Rps19 ENSMUSG00000040952 1662 0.996 0.996 - - - - - ribosomal protein S19 [Source:MGI Symbol;Acc:MGI:1333780]
63. Dnal4 ENSMUSG00000022420 1780 0.995 0.995 - - - - - dynein, axonemal, light chain 4 [Source:MGI Symbol;Acc:MGI:1859217]
64. Dnajc15 ENSMUSG00000022013 1651 0.995 0.995 - - - - - DnaJ heat shock protein family (Hsp40) member C15 [Source:MGI Symbol;Acc:MGI:1913398]
65. Klhl21 ENSMUSG00000073700 522 0.994 0.994 - - - - - kelch-like 21 [Source:MGI Symbol;Acc:MGI:1919288]
66. Upf3b ENSMUSG00000036572 3876 0.993 0.993 - - - - - UPF3 regulator of nonsense transcripts homolog B (yeast) [Source:MGI Symbol;Acc:MGI:1915384]
67. Tpp1 ENSMUSG00000030894 2200 0.993 0.993 - - - - - tripeptidyl peptidase I [Source:MGI Symbol;Acc:MGI:1336194]
68. Tgfbi ENSMUSG00000035493 4482 0.993 0.993 - - - - - transforming growth factor, beta induced [Source:MGI Symbol;Acc:MGI:99959]
69. Afg3l2 ENSMUSG00000024527 3339 0.992 0.992 - - - - - AFG3-like AAA ATPase 2 [Source:MGI Symbol;Acc:MGI:1916847]
70. Rfx1 ENSMUSG00000031706 2325 0.992 0.992 - - - - - regulatory factor X, 1 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:105982]
71. Gcn1l1 ENSMUSG00000041638 2104 0.991 0.991 - - - - - GCN1 general control of amino-acid synthesis 1-like 1 (yeast) [Source:MGI Symbol;Acc:MGI:2444248]
72. Mrpl47 ENSMUSG00000037531 2367 0.991 0.991 - - - - - mitochondrial ribosomal protein L47 [Source:MGI Symbol;Acc:MGI:1921850]
73. Ccdc59 ENSMUSG00000019897 2124 0.99 0.990 - - - - - coiled-coil domain containing 59 [Source:MGI Symbol;Acc:MGI:1289302]
74. Fzd7 ENSMUSG00000041075 1764 0.989 0.989 - - - - - frizzled class receptor 7 [Source:MGI Symbol;Acc:MGI:108570]
75. Bdp1 ENSMUSG00000049658 1860 0.989 0.989 - - - - - B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB [Source:MGI Symbol;Acc:MGI:1347077]
76. Fam193a ENSMUSG00000037210 8356 0.989 0.989 - - - - - family with sequence similarity 193, member A [Source:MGI Symbol;Acc:MGI:2447768]
77. Znrd1 ENSMUSG00000036315 3497 0.988 0.988 - - - - - zinc ribbon domain containing, 1 [Source:MGI Symbol;Acc:MGI:1913386]
78. Dkc1 ENSMUSG00000031403 2310 0.988 0.988 - - - - - dyskeratosis congenita 1, dyskerin [Source:MGI Symbol;Acc:MGI:1861727]
79. Sec24c ENSMUSG00000039367 2939 0.987 0.987 - - - - - Sec24 related gene family, member C (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1919746]
80. Arl6ip4 ENSMUSG00000029404 2690 0.986 0.986 - - - - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:MGI Symbol;Acc:MGI:1929500]
81. Aste1 ENSMUSG00000032567 469 0.985 0.985 - - - - - asteroid homolog 1 [Source:MGI Symbol;Acc:MGI:1913845]
82. Samm50 ENSMUSG00000022437 3134 0.985 0.985 - - - - - SAMM50 sorting and assembly machinery component [Source:MGI Symbol;Acc:MGI:1915903]
83. Sbk1 ENSMUSG00000042978 3908 0.984 0.984 - - - - - SH3-binding kinase 1 [Source:MGI Symbol;Acc:MGI:2135937]
84. Fbl ENSMUSG00000046865 3764 0.983 0.983 - - - - - fibrillarin [Source:MGI Symbol;Acc:MGI:95486]
85. Chd8 ENSMUSG00000053754 3885 0.983 0.983 - - - - - chromodomain helicase DNA binding protein 8 [Source:MGI Symbol;Acc:MGI:1915022]
86. Imp4 ENSMUSG00000026127 3230 0.983 0.983 - - - - - IMP4, U3 small nucleolar ribonucleoprotein [Source:MGI Symbol;Acc:MGI:106572]
87. Rybp ENSMUSG00000072872 2418 0.982 0.982 - - - - - RING1 and YY1 binding protein [Source:MGI Symbol;Acc:MGI:1929059]
88. Sqle ENSMUSG00000022351 3055 0.982 0.982 - - - - - squalene epoxidase [Source:MGI Symbol;Acc:MGI:109296]
89. Tagln ENSMUSG00000032085 1289 0.982 0.982 - - - - - transgelin [Source:MGI Symbol;Acc:MGI:106012]
90. Nkx2-9 ENSMUSG00000058669 17 0.982 - 0.982 - - - - NK2 homeobox 9 [Source:MGI Symbol;Acc:MGI:1270158]
91. Pard6g ENSMUSG00000056214 2715 0.981 0.981 - - - - - par-6 family cell polarity regulator gamma [Source:MGI Symbol;Acc:MGI:2135606]
92. Atxn7l3 ENSMUSG00000059995 4118 0.981 0.981 - - - - - ataxin 7-like 3 [Source:MGI Symbol;Acc:MGI:3036270]
93. Ints4 ENSMUSG00000025133 3040 0.98 0.980 - - - - - integrator complex subunit 4 [Source:MGI Symbol;Acc:MGI:1917164]
94. Nmt1 ENSMUSG00000020936 4325 0.98 0.980 - - - - - N-myristoyltransferase 1 [Source:MGI Symbol;Acc:MGI:102579]
95. Lyar ENSMUSG00000067367 3269 0.978 0.978 - - - - - Ly1 antibody reactive clone [Source:MGI Symbol;Acc:MGI:107470]
96. Gfm1 ENSMUSG00000027774 1782 0.976 0.976 - - - - - G elongation factor, mitochondrial 1 [Source:MGI Symbol;Acc:MGI:107339]
97. Mib1 ENSMUSG00000024294 3226 0.975 0.975 - - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:2443157]
98. Mrpl51 ENSMUSG00000030335 4298 0.973 0.973 - - - - - mitochondrial ribosomal protein L51 [Source:MGI Symbol;Acc:MGI:1913743]
99. Usp48 ENSMUSG00000043411 3442 0.972 0.972 - - - - - ubiquitin specific peptidase 48 [Source:MGI Symbol;Acc:MGI:2158502]
100. Vdac1 ENSMUSG00000020402 5008 0.971 0.971 - - - - - voltage-dependent anion channel 1 [Source:MGI Symbol;Acc:MGI:106919]

There are 250 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA