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Results for Hmgb1-ps4

Gene Name Gene ID Reads Annotation
Hmgb1-ps4 ENSMUSG00000084221, ENSMUSG00000106792 41 high mobility group box 1, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3768540]







Genes with expression patterns similar to Hmgb1-ps4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hmgb1-ps4 ENSMUSG00000084221, ENSMUSG00000106792 41 6 1.000 1.000 1.000 1.000 1.000 1.000 high mobility group box 1, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3768540]
2. Grm1 ENSMUSG00000019828 8 1.58 0.787 - 0.793 - - - glutamate receptor, metabotropic 1 [Source:MGI Symbol;Acc:MGI:1351338]
3. Npy6r ENSMUSG00000038071 1 0.877 - - - - - 0.877 neuropeptide Y receptor Y6 [Source:MGI Symbol;Acc:MGI:1098590]
4. Gm26819 ENSMUSG00000097033 3 0.877 - - - - - 0.877 predicted gene, 26819 [Source:MGI Symbol;Acc:MGI:5477313]
5. Galr1 ENSMUSG00000024553 3 0.877 - - - - - 0.877 galanin receptor 1 [Source:MGI Symbol;Acc:MGI:1096364]
6. Gm26930 ENSMUSG00000102142 113 0.877 - - - - - 0.877 predicted gene, 26930 [Source:MGI Symbol;Acc:MGI:5504045]
7. Gm25723 ENSMUSG00000077718 2 0.877 - - - - - 0.877 predicted gene, 25723 [Source:MGI Symbol;Acc:MGI:5455500]
8. Tmc1 ENSMUSG00000024749 7 0.877 - - - - - 0.877 transmembrane channel-like gene family 1 [Source:MGI Symbol;Acc:MGI:2151016]
9. Gm9897 Gm9897 7 0.877 - - - - - 0.877
10. Ttc30a2 ENSMUSG00000075272 1 0.877 - - - - - 0.877 tetratricopeptide repeat domain 30A2 [Source:MGI Symbol;Acc:MGI:3700200]
11. Batf ENSMUSG00000034266 4 0.877 - - - - - 0.877 basic leucine zipper transcription factor, ATF-like [Source:MGI Symbol;Acc:MGI:1859147]
12. 9330161L09Rik ENSMUSG00000055271 6 0.877 - - - - - 0.877 RIKEN cDNA 9330161L09 gene [Source:MGI Symbol;Acc:MGI:1924475]
13. Ftcd ENSMUSG00000001155 16 0.877 - - - - - 0.877 formiminotransferase cyclodeaminase [Source:MGI Symbol;Acc:MGI:1339962]
14. Vmn2r-ps159 ENSMUSG00000057021 1 0.877 - - - - - 0.877 vomeronasal 2, receptor, pseudogene 159 [Source:MGI Symbol;Acc:MGI:1316735]
15. Adnp ENSMUSG00000051149 4 0.877 - - - - - 0.877 activity-dependent neuroprotective protein [Source:MGI Symbol;Acc:MGI:1338758]
16. 1700008I05Rik 1700008I05Rik 1 0.877 - - - - - 0.877
17. Gm11652 ENSMUSG00000083465 13 0.877 - - - - - 0.877 predicted gene 11652 [Source:MGI Symbol;Acc:MGI:3651204]
18. Aifm3 ENSMUSG00000022763 11 0.877 - - - - - 0.877 apoptosis-inducing factor, mitochondrion-associated 3 [Source:MGI Symbol;Acc:MGI:1919418]
19. Gm5456 ENSMUSG00000094242 7 0.877 - - - - - 0.877 predicted gene 5456 [Source:MGI Symbol;Acc:MGI:3643775]
20. Gm12296 ENSMUSG00000084967 2 0.877 - - - - - 0.877 predicted gene 12296 [Source:MGI Symbol;Acc:MGI:3711946]
21. Tctn1 ENSMUSG00000038593 6 0.877 - - - - - 0.877 tectonic family member 1 [Source:MGI Symbol;Acc:MGI:3603820]
22. Gif ENSMUSG00000024682 1 0.877 - - - - - 0.877 gastric intrinsic factor [Source:MGI Symbol;Acc:MGI:1202394]
23. Ankfn1 ENSMUSG00000047773 2 0.877 - - - - - 0.877 ankyrin-repeat and fibronectin type III domain containing 1 [Source:MGI Symbol;Acc:MGI:2686021]
24. Pdilt ENSMUSG00000030968 1 0.877 - - - - - 0.877 protein disulfide isomerase-like, testis expressed [Source:MGI Symbol;Acc:MGI:1919080]
25. Gm20465 ENSMUSG00000092275 2 0.877 - - - - - 0.877 predicted gene 20465 [Source:MGI Symbol;Acc:MGI:5141930]
26. Gm10698 ENSMUSG00000079884 1 0.877 - - - - - 0.877 predicted gene 10698 [Source:MGI Symbol;Acc:MGI:3704329]
27. Sstr3 ENSMUSG00000044933 6 0.877 - - - - - 0.877 somatostatin receptor 3 [Source:MGI Symbol;Acc:MGI:98329]
28. AB041803 AB041803 1 0.877 - - - - - 0.877
29. Gm1527 ENSMUSG00000074655 1 0.877 - - - - - 0.877 predicted gene 1527 [Source:MGI Symbol;Acc:MGI:2686373]
30. Plscr5 ENSMUSG00000095654 1 0.877 - - - - - 0.877 phospholipid scramblase family, member 5 [Source:MGI Symbol;Acc:MGI:3779462]
31. Cckar ENSMUSG00000029193 9 0.877 - - - - - 0.877 cholecystokinin A receptor [Source:MGI Symbol;Acc:MGI:99478]
32. Rpl31-ps22 ENSMUSG00000081925 2 0.877 - - - - - 0.877 ribosomal protein L31, pseudogene 22 [Source:MGI Symbol;Acc:MGI:3783213]
33. Gm8935 ENSMUSG00000095661 6 0.877 - - - - - 0.877 predicted pseudogene 8935 [Source:MGI Symbol;Acc:MGI:3643401]
34. Ttll9 ENSMUSG00000074673 21 0.877 - - - - - 0.877 tubulin tyrosine ligase-like family, member 9 [Source:MGI Symbol;Acc:MGI:1913589]
35. Gm7936 ENSMUSG00000055771 8 0.877 - - - - - 0.877 predicted pseudogene 7936 [Source:MGI Symbol;Acc:MGI:3646364]
36. Heatr2 Heatr2 29 0.864 0.864 - - - - -
37. Slc14a2 ENSMUSG00000024552 13 0.848 - - - - - 0.848 solute carrier family 14 (urea transporter), member 2 [Source:MGI Symbol;Acc:MGI:1351653]
38. Arntl2 ENSMUSG00000040187 86 0.847 - - 0.847 - - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:MGI Symbol;Acc:MGI:2684845]
39. Gm7507 ENSMUSG00000098142 3 0.842 - - 0.842 - - - predicted gene 7507 [Source:MGI Symbol;Acc:MGI:3643248]
40. Gm9835 Gm9835 15 0.822 0.822 - - - - -
41. Ramp1 ENSMUSG00000034353 14 0.822 - - 0.822 - - - receptor (calcitonin) activity modifying protein 1 [Source:MGI Symbol;Acc:MGI:1858418]
42. Adamts12 ENSMUSG00000047497 21 0.821 - - 0.821 - - - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12 [Source:MGI Symbol;Acc:MGI:2146046]
43. Gm5422 ENSMUSG00000039684 184 0.821 0.821 - - - - - predicted pseudogene 5422 [Source:MGI Symbol;Acc:MGI:3643411]
44. Gm13668 ENSMUSG00000083072 4 0.821 - - 0.821 - - - predicted gene 13668 [Source:MGI Symbol;Acc:MGI:3650878]
45. Gm23458 ENSMUSG00000065191 51 0.82 0.820 - - - - - predicted gene, 23458 [Source:MGI Symbol;Acc:MGI:5453235]
46. 9630028B13Rik ENSMUSG00000051295 14 0.819 - - 0.819 - - - RIKEN cDNA 9630028B13 gene [Source:MGI Symbol;Acc:MGI:2442281]
47. Gm26756 ENSMUSG00000097840 5 0.818 - - 0.818 - - - predicted gene, 26756 [Source:MGI Symbol;Acc:MGI:5477250]
48. Dear1 2 0.816 0.816 - - - - - dual endothelin 1/angiotensin II receptor 1
49. 1700064E03Rik 1700064E03Rik 8 0.816 0.816 - - - - -
50. Olfr732 ENSMUSG00000091873 2 0.816 0.816 - - - - - olfactory receptor 732 [Source:MGI Symbol;Acc:MGI:3030566]
51. Gm12900 ENSMUSG00000082634 5 0.816 0.816 - - - - - predicted gene 12900 [Source:MGI Symbol;Acc:MGI:3650387]
52. Dmrtc1a ENSMUSG00000031323 11 0.816 0.816 - - - - - DMRT-like family C1a [Source:MGI Symbol;Acc:MGI:1918137]
53. Rps15a-ps2 ENSMUSG00000067351 6 0.816 0.816 - - - - - ribosomal protein S15A, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3643316]
54. Haghl ENSMUSG00000061046 16 0.816 - - 0.816 - - - hydroxyacylglutathione hydrolase-like [Source:MGI Symbol;Acc:MGI:1919877]
55. Gm5356 ENSMUSG00000069962 9 0.816 0.816 - - - - - predicted pseudogene 5356 [Source:MGI Symbol;Acc:MGI:3643649]
56. Fscn3 ENSMUSG00000029707 4 0.816 0.816 - - - - - fascin actin-bundling protein 3 [Source:MGI Symbol;Acc:MGI:1890386]
57. Osbpl10 ENSMUSG00000040875 9 0.816 0.816 - - - - - oxysterol binding protein-like 10 [Source:MGI Symbol;Acc:MGI:1921736]
58. Gm22783 ENSMUSG00000077277 3 0.816 0.816 - - - - - predicted gene, 22783 [Source:MGI Symbol;Acc:MGI:5452560]
59. Tespa1 ENSMUSG00000034833 3 0.816 0.816 - - - - - thymocyte expressed, positive selection associated 1 [Source:MGI Symbol;Acc:MGI:1914846]
60. Kcnh3 ENSMUSG00000037579 5 0.816 0.816 - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:MGI Symbol;Acc:MGI:1341723]
61. Gm2415 ENSMUSG00000086119 5 0.816 0.816 - - - - - predicted gene 2415 [Source:MGI Symbol;Acc:MGI:3780582]
62. Gm4847 ENSMUSG00000051081 3 0.816 0.816 - - - - - predicted gene 4847 [Source:MGI Symbol;Acc:MGI:3643320]
63. Il17f ENSMUSG00000041872 5 0.816 0.816 - - - - - interleukin 17F [Source:MGI Symbol;Acc:MGI:2676631]
64. Gm14530 ENSMUSG00000081735 6 0.813 - - 0.813 - - - predicted gene 14530 [Source:MGI Symbol;Acc:MGI:3705621]
65. Slc35d3 ENSMUSG00000050473 84 0.812 - - 0.812 - - - solute carrier family 35, member D3 [Source:MGI Symbol;Acc:MGI:1923407]
66. Trim29 ENSMUSG00000032013 39 0.81 - - 0.810 - - - tripartite motif-containing 29 [Source:MGI Symbol;Acc:MGI:1919419]
67. Gm26676 ENSMUSG00000097593 3 0.809 - - 0.809 - - - predicted gene, 26676 [Source:MGI Symbol;Acc:MGI:5477170]
68. Itgae ENSMUSG00000005947 13 0.808 0.808 - - - - - integrin alpha E, epithelial-associated [Source:MGI Symbol;Acc:MGI:1298377]
69. Carf ENSMUSG00000026017 38 0.807 0.807 - - - - - calcium response factor [Source:MGI Symbol;Acc:MGI:2182269]
70. Shroom1 ENSMUSG00000018387 17 0.807 0.807 - - - - - shroom family member 1 [Source:MGI Symbol;Acc:MGI:1919024]
71. Adh6b ENSMUSG00000074206 15 0.806 - - 0.806 - - - alcohol dehydrogenase 6B (class V) [Source:MGI Symbol;Acc:MGI:2446626]
72. 4930415L06Rik ENSMUSG00000035387 4 0.806 - - 0.806 - - - RIKEN cDNA 4930415L06 gene [Source:MGI Symbol;Acc:MGI:3588286]
73. Gm5535 ENSMUSG00000074758 5 0.806 - - 0.806 - - - predicted gene 5535 [Source:MGI Symbol;Acc:MGI:3645019]
74. Tubb4b-ps1 ENSMUSG00000095159 12 0.806 - - 0.806 - - - tubulin, beta 4B class IVB, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3642800]
75. Gm13269 ENSMUSG00000087086 2 0.806 - - 0.806 - - - predicted gene 13269 [Source:MGI Symbol;Acc:MGI:3651949]
76. Gm14124 ENSMUSG00000079008 2 0.806 - - 0.806 - - - predicted gene 14124 [Source:MGI Symbol;Acc:MGI:3652002]
77. Syt8 ENSMUSG00000031098 5 0.806 - - 0.806 - - - synaptotagmin VIII [Source:MGI Symbol;Acc:MGI:1859867]
78. Gm9903 ENSMUSG00000097271 3 0.806 - - 0.806 - - - predicted gene 9903 [Source:MGI Symbol;Acc:MGI:3646113]
79. Gm11513 ENSMUSG00000087630 4 0.806 - - 0.806 - - - predicted gene 11513 [Source:MGI Symbol;Acc:MGI:3649561]
80. Gm20522 ENSMUSG00000092241 11 0.806 - - 0.806 - - - predicted gene 20522 [Source:MGI Symbol;Acc:MGI:5141987]
81. Skint3 ENSMUSG00000070868 2 0.806 - - 0.806 - - - selection and upkeep of intraepithelial T cells 3 [Source:MGI Symbol;Acc:MGI:3045331]
82. Gm17130 ENSMUSG00000106894 2 0.806 - - 0.806 - - - predicted gene 17130 [Source:MGI Symbol;Acc:MGI:4937957]
83. Hcn1 ENSMUSG00000021730 3 0.806 - - 0.806 - - - hyperpolarization-activated, cyclic nucleotide-gated K+ 1 [Source:MGI Symbol;Acc:MGI:1096392]
84. Tlr4 ENSMUSG00000039005 28 0.802 - - 0.802 - - - toll-like receptor 4 [Source:MGI Symbol;Acc:MGI:96824]
85. Fscn2 ENSMUSG00000025380 12 0.801 - - 0.801 - - - fascin actin-bundling protein 2 [Source:MGI Symbol;Acc:MGI:2443337]
86. Gm20604 ENSMUSG00000041716 10 0.799 - - 0.799 - - - predicted gene 20604 [Source:MGI Symbol;Acc:MGI:5305180]
87. Ly6g6e ENSMUSG00000013766 3 0.799 0.799 - - - - - lymphocyte antigen 6 complex, locus G6E [Source:MGI Symbol;Acc:MGI:1917524]
88. Stat5a ENSMUSG00000004043 35 0.799 - - 0.799 - - - signal transducer and activator of transcription 5A [Source:MGI Symbol;Acc:MGI:103036]
89. Gm16741 ENSMUSG00000084775 11 0.799 0.799 - - - - - predicted gene, 16741 [Source:MGI Symbol;Acc:MGI:4439665]
90. Ugt1a6a ENSMUSG00000054545 55 0.796 - - 0.796 - - - UDP glucuronosyltransferase 1 family, polypeptide A6A [Source:MGI Symbol;Acc:MGI:2137698]
91. Rps8-ps2 ENSMUSG00000083481 3 0.793 - - 0.793 - - - ribosomal protein S8, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3649696]
92. RP24-338F2.1 RP24-338F2.1 5 0.792 0.792 - - - - -
93. H2-K2 ENSMUSG00000067203 105 0.791 - - 0.791 - - - histocompatibility 2, K region locus 2 [Source:MGI Symbol;Acc:MGI:95906]
94. 4930500F10Rik ENSMUSG00000097592 8 0.79 - - 0.790 - - - RIKEN cDNA 4930500F10 gene [Source:MGI Symbol;Acc:MGI:1922262]
95. Gm6133 ENSMUSG00000090451 13 0.79 - - 0.790 - - - predicted gene 6133 [Source:MGI Symbol;Acc:MGI:3647029]
96. Gm16880 Gm16880 3 0.787 0.787 - - - - -
97. Has2os ENSMUSG00000086541 9 0.787 - - 0.787 - - - hyaluronan synthase 2, opposite strand [Source:MGI Symbol;Acc:MGI:3643465]
98. Slc16a11 ENSMUSG00000040938 5 0.787 0.787 - - - - - solute carrier family 16 (monocarboxylic acid transporters), member 11 [Source:MGI Symbol;Acc:MGI:2663709]
99. Paqr6 ENSMUSG00000041423 9 0.785 - - 0.785 - - - progestin and adipoQ receptor family member VI [Source:MGI Symbol;Acc:MGI:1916207]
100. Gm17511 ENSMUSG00000090460 2 0.785 - - 0.785 - - - predicted gene, 17511 [Source:MGI Symbol;Acc:MGI:4937145]

There are 72 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA