Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Hmgb1-ps3

Gene Name Gene ID Reads Annotation
Hmgb1-ps3 ENSMUSG00000081455 5 high mobility group box 1, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3768539]







Genes with expression patterns similar to Hmgb1-ps3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hmgb1-ps3 ENSMUSG00000081455 5 3 1.000 - 1.000 - 1.000 - high mobility group box 1, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3768539]
2. Tnfrsf26 ENSMUSG00000045362 11 1.689 0.939 - - - 0.750 - tumor necrosis factor receptor superfamily, member 26 [Source:MGI Symbol;Acc:MGI:2651928]
3. Rasgrf2 ENSMUSG00000021708 16 1 1.000 - - - - - RAS protein-specific guanine nucleotide-releasing factor 2 [Source:MGI Symbol;Acc:MGI:109137]
4. Skint4 ENSMUSG00000055960 4 1 1.000 - - - - - selection and upkeep of intraepithelial T cells 4 [Source:MGI Symbol;Acc:MGI:2444425]
5. Gm9041 Gm9041 1 1 1.000 - - - - -
6. Triml2 ENSMUSG00000091490 3 1 1.000 - - - - - tripartite motif family-like 2 [Source:MGI Symbol;Acc:MGI:3642989]
7. Gm10430 Gm10430 4 1 1.000 - - - - -
8. Fcer2a ENSMUSG00000005540 20 1 1.000 - - - - - Fc receptor, IgE, low affinity II, alpha polypeptide [Source:MGI Symbol;Acc:MGI:95497]
9. Gm16335 ENSMUSG00000085340 1 1 1.000 - - - - - predicted gene 16335 [Source:MGI Symbol;Acc:MGI:3840152]
10. Fam46d 4 1 1.000 - - - - - family with sequence similarity 46, member D, transcript variant X1
11. A930028C08Rik A930028C08Rik 2 1 1.000 - - - - -
12. Slc6a12 ENSMUSG00000030109 2 1 1.000 - - - - - solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12 [Source:MGI Symbol;Acc:MGI:95628]
13. Dhh ENSMUSG00000023000 23 1 1.000 - - - - - desert hedgehog [Source:MGI Symbol;Acc:MGI:94891]
14. Gm12902 ENSMUSG00000082515 1 1 1.000 - - - - - predicted gene 12902 [Source:MGI Symbol;Acc:MGI:3650399]
15. Gm12264 ENSMUSG00000086536 3 1 1.000 - - - - - predicted gene 12264 [Source:MGI Symbol;Acc:MGI:3702404]
16. Grifin ENSMUSG00000036586 6 1 1.000 - - - - - galectin-related inter-fiber protein [Source:MGI Symbol;Acc:MGI:1925248]
17. 4930539E08Rik ENSMUSG00000048905 9 1 1.000 - - - - - RIKEN cDNA 4930539E08 gene [Source:MGI Symbol;Acc:MGI:1925441]
18. Htr1b ENSMUSG00000049511 77 1 1.000 - - - - - 5-hydroxytryptamine (serotonin) receptor 1B [Source:MGI Symbol;Acc:MGI:96274]
19. Gm10232 ENSMUSG00000068141 4 1 1.000 - - - - - predicted pseudogene 10232 [Source:MGI Symbol;Acc:MGI:3641637]
20. F630040L22Rik F630040L22Rik 4 1 1.000 - - - - -
21. Ccl2 ENSMUSG00000035385 2 1 1.000 - - - - - chemokine (C-C motif) ligand 2 [Source:MGI Symbol;Acc:MGI:98259]
22. 4933405L10Rik ENSMUSG00000013158 5 1 1.000 - - - - - RIKEN cDNA 4933405L10 gene [Source:MGI Symbol;Acc:MGI:1918296]
23. 1700125H20Rik ENSMUSG00000018479 5 1 1.000 - - - - - RIKEN cDNA 1700125H20 gene [Source:MGI Symbol;Acc:MGI:1920884]
24. Gm12057 ENSMUSG00000084081 4 1 1.000 - - - - - predicted gene 12057 [Source:MGI Symbol;Acc:MGI:3650030]
25. Gm12043 ENSMUSG00000087253 6 1 1.000 - - - - - predicted gene 12043 [Source:MGI Symbol;Acc:MGI:3651843]
26. Ankrd34b ENSMUSG00000045034 17 0.993 0.993 - - - - - ankyrin repeat domain 34B [Source:MGI Symbol;Acc:MGI:2443245]
27. Wfdc3 ENSMUSG00000076434 12 0.97 0.970 - - - - - WAP four-disulfide core domain 3 [Source:MGI Symbol;Acc:MGI:1923897]
28. 4921507G05Rik ENSMUSG00000097650 5 0.97 0.970 - - - - - RIKEN cDNA 4921507G05 gene [Source:MGI Symbol;Acc:MGI:1913959]
29. Mettl21e ENSMUSG00000046828 7 0.963 - - 0.963 - - - methyltransferase like 21E [Source:MGI Symbol;Acc:MGI:2685837]
30. Gm25541 ENSMUSG00000080538 21 0.962 - - 0.962 - - - predicted gene, 25541 [Source:MGI Symbol;Acc:MGI:5455318]
31. Gm14951 ENSMUSG00000084776 22 0.962 - - 0.962 - - - predicted gene 14951 [Source:MGI Symbol;Acc:MGI:3705251]
32. 2310042E22Rik 2310042E22Rik 17 0.962 - - 0.962 - - -
33. Ugt3a2 ENSMUSG00000049152 5 0.962 - - 0.962 - - - UDP glycosyltransferases 3 family, polypeptide A2 [Source:MGI Symbol;Acc:MGI:2145969]
34. 1700057H21Rik ENSMUSG00000086007 2 0.962 - - 0.962 - - - RIKEN cDNA 1700057H21 gene [Source:MGI Symbol;Acc:MGI:1920625]
35. Prl8a6 ENSMUSG00000021345 4 0.962 - - 0.962 - - - prolactin family 8, subfamily a, member 6 [Source:MGI Symbol;Acc:MGI:1332225]
36. Crhbp ENSMUSG00000021680 29 0.962 - - 0.962 - - - corticotropin releasing hormone binding protein [Source:MGI Symbol;Acc:MGI:88497]
37. Gm20628 ENSMUSG00000093656 3 0.962 - - 0.962 - - - predicted gene 20628 [Source:MGI Symbol;Acc:MGI:5313075]
38. Gm12295 ENSMUSG00000085162 3 0.962 - - 0.962 - - - predicted gene 12295 [Source:MGI Symbol;Acc:MGI:3650535]
39. Gm773 ENSMUSG00000073177 2 0.962 - - 0.962 - - - predicted gene 773 [Source:MGI Symbol;Acc:MGI:2685619]
40. Dupd1 ENSMUSG00000063821 7 0.962 - - 0.962 - - - dual specificity phosphatase and pro isomerase domain containing 1 [Source:MGI Symbol;Acc:MGI:3647127]
41. Gm22257 ENSMUSG00000089312 2 0.962 - - 0.962 - - - predicted gene, 22257 [Source:MGI Symbol;Acc:MGI:5452034]
42. Gm11370 ENSMUSG00000081905 2 0.962 - - 0.962 - - - predicted gene 11370 [Source:MGI Symbol;Acc:MGI:3651832]
43. Slc11a1 ENSMUSG00000026177 34 0.961 - - 0.961 - - - solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 [Source:MGI Symbol;Acc:MGI:1345275]
44. Lrrc25 ENSMUSG00000049988 4 0.96 - - 0.960 - - - leucine rich repeat containing 25 [Source:MGI Symbol;Acc:MGI:2445284]
45. Fcna ENSMUSG00000026938 10 0.96 - - 0.960 - - - ficolin A [Source:MGI Symbol;Acc:MGI:1340905]
46. Pirb ENSMUSG00000058818 16 0.958 - - 0.958 - - - paired Ig-like receptor B [Source:MGI Symbol;Acc:MGI:894311]
47. Gm7416 ENSMUSG00000084031 7 0.958 - - 0.958 - - - predicted gene 7416 [Source:MGI Symbol;Acc:MGI:3647901]
48. Gm25520 ENSMUSG00000089014 14 0.956 - - 0.956 - - - predicted gene, 25520 [Source:MGI Symbol;Acc:MGI:5455297]
49. Hcrtr2 ENSMUSG00000032360 19 0.955 - - 0.955 - - - hypocretin (orexin) receptor 2 [Source:MGI Symbol;Acc:MGI:2680765]
50. Cxcl1 ENSMUSG00000029380 4 0.951 - - 0.951 - - - chemokine (C-X-C motif) ligand 1 [Source:MGI Symbol;Acc:MGI:108068]
51. Cngb1 ENSMUSG00000031789 4 0.95 - - 0.950 - - - cyclic nucleotide gated channel beta 1 [Source:MGI Symbol;Acc:MGI:2664102]
52. Gm25789 ENSMUSG00000065228 22 0.948 - - 0.948 - - - predicted gene, 25789 [Source:MGI Symbol;Acc:MGI:5455566]
53. Cox6b2 ENSMUSG00000051811 121 0.948 - - 0.948 - - - cytochrome c oxidase subunit 6B2 [Source:MGI Symbol;Acc:MGI:3044182]
54. Npas4 ENSMUSG00000045903 62 0.947 - - 0.947 - - - neuronal PAS domain protein 4 [Source:MGI Symbol;Acc:MGI:2664186]
55. Rasal3 ENSMUSG00000052142 7 0.947 - - 0.947 - - - RAS protein activator like 3 [Source:MGI Symbol;Acc:MGI:2444128]
56. Hpgds ENSMUSG00000029919 68 0.946 - - 0.946 - - - hematopoietic prostaglandin D synthase [Source:MGI Symbol;Acc:MGI:1859384]
57. Sprtn ENSMUSG00000031986 4 0.944 - - 0.944 - - - SprT-like N-terminal domain [Source:MGI Symbol;Acc:MGI:2685351]
58. Gm13056 ENSMUSG00000085395 13 0.943 - - 0.943 - - - predicted gene 13056 [Source:MGI Symbol;Acc:MGI:3650725]
59. Gpr35 ENSMUSG00000026271 17 0.942 - - 0.942 - - - G protein-coupled receptor 35 [Source:MGI Symbol;Acc:MGI:1929509]
60. Gm26724 ENSMUSG00000097090 14 0.939 0.939 - - - - - predicted gene, 26724 [Source:MGI Symbol;Acc:MGI:5477218]
61. Tfap2e ENSMUSG00000042477 4 0.939 0.939 - - - - - transcription factor AP-2, epsilon [Source:MGI Symbol;Acc:MGI:2679630]
62. Popdc3 ENSMUSG00000019848 48 0.938 - - 0.938 - - - popeye domain containing 3 [Source:MGI Symbol;Acc:MGI:1930153]
63. Gm26771 ENSMUSG00000097250 8 0.936 - - 0.936 - - - predicted gene, 26771 [Source:MGI Symbol;Acc:MGI:5477265]
64. Gm20663 ENSMUSG00000093378 49 0.934 - - 0.934 - - - predicted gene 20663 [Source:MGI Symbol;Acc:MGI:5313110]
65. B3gnt9 ENSMUSG00000069920 24 0.934 - - 0.934 - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 [Source:MGI Symbol;Acc:MGI:2142841]
66. Gm26721 ENSMUSG00000096943 22 0.933 - - 0.933 - - - predicted gene, 26721 [Source:MGI Symbol;Acc:MGI:5477215]
67. 9930013L23Rik 9930013L23Rik 21 0.933 - - 0.933 - - -
68. Sertm1 ENSMUSG00000056306 22 0.932 0.932 - - - - - serine rich and transmembrane domain containing 1 [Source:MGI Symbol;Acc:MGI:3607715]
69. Bmp5 ENSMUSG00000032179 12 0.928 - - 0.928 - - - bone morphogenetic protein 5 [Source:MGI Symbol;Acc:MGI:88181]
70. RP24-325L16.1 RP24-325L16.1 31 0.927 - - 0.927 - - -
71. A2m ENSMUSG00000030111 38 0.925 - - 0.925 - - - alpha-2-macroglobulin [Source:MGI Symbol;Acc:MGI:2449119]
72. Gm4221 ENSMUSG00000096948 9 0.924 0.924 - - - - - predicted gene 4221 [Source:MGI Symbol;Acc:MGI:3782397]
73. Gm11645 ENSMUSG00000080895 26 0.924 - - 0.924 - - - predicted gene 11645 [Source:MGI Symbol;Acc:MGI:3652133]
74. Msc ENSMUSG00000025930 30 0.921 - - 0.921 - - - musculin [Source:MGI Symbol;Acc:MGI:1333884]
75. Nod2 ENSMUSG00000055994 12 0.918 - - 0.918 - - - nucleotide-binding oligomerization domain containing 2 [Source:MGI Symbol;Acc:MGI:2429397]
76. Ptpn22 ENSMUSG00000027843 17 0.917 - - 0.917 - - - protein tyrosine phosphatase, non-receptor type 22 (lymphoid) [Source:MGI Symbol;Acc:MGI:107170]
77. Slc47a2 ENSMUSG00000069855 2 0.915 0.915 - - - - - solute carrier family 47, member 2 [Source:MGI Symbol;Acc:MGI:3588190]
78. Gm4787 ENSMUSG00000072974 15 0.915 - - 0.915 - - - predicted gene 4787 [Source:MGI Symbol;Acc:MGI:3646380]
79. Syt12 ENSMUSG00000049303 17 0.915 - - 0.915 - - - synaptotagmin XII [Source:MGI Symbol;Acc:MGI:2159601]
80. E230001N04Rik ENSMUSG00000066170 39 0.913 - - 0.913 - - - RIKEN cDNA E230001N04 gene [Source:MGI Symbol;Acc:MGI:2443549]
81. E530001K10Rik E530001K10Rik 32 0.912 0.912 - - - - -
82. Fgf3 ENSMUSG00000031074 13 0.912 0.912 - - - - - fibroblast growth factor 3 [Source:MGI Symbol;Acc:MGI:95517]
83. Lama3 ENSMUSG00000024421 55 0.907 - - 0.907 - - - laminin, alpha 3 [Source:MGI Symbol;Acc:MGI:99909]
84. Thap1 ENSMUSG00000037214 256 0.907 - - 0.907 - - - THAP domain containing, apoptosis associated protein 1 [Source:MGI Symbol;Acc:MGI:1921004]
85. Ctrl ENSMUSG00000031896 15 0.901 0.901 - - - - - chymotrypsin-like [Source:MGI Symbol;Acc:MGI:88558]
86. Cdh9 ENSMUSG00000025370 9 0.9 - - 0.900 - - - cadherin 9 [Source:MGI Symbol;Acc:MGI:107433]
87. Gdpd2 ENSMUSG00000019359 31 0.9 0.900 - - - - - glycerophosphodiester phosphodiesterase domain containing 2 [Source:MGI Symbol;Acc:MGI:1918834]
88. Fcrl6 ENSMUSG00000070504 5 0.9 0.900 - - - - - Fc receptor-like 6 [Source:MGI Symbol;Acc:MGI:3618339]
89. 4930570G19Rik ENSMUSG00000085084 34 0.898 - - 0.898 - - - RIKEN cDNA 4930570G19 gene [Source:MGI Symbol;Acc:MGI:1923158]
90. Trh ENSMUSG00000005892 4 0.897 0.897 - - - - - thyrotropin releasing hormone [Source:MGI Symbol;Acc:MGI:98823]
91. Pi4kb ENSMUSG00000038861 97 0.897 - - 0.897 - - - phosphatidylinositol 4-kinase beta [Source:MGI Symbol;Acc:MGI:1334433]
92. Crygn ENSMUSG00000038135 6 0.897 0.897 - - - - - crystallin, gamma N [Source:MGI Symbol;Acc:MGI:2449167]
93. Gm13657 ENSMUSG00000086813 15 0.895 - - 0.895 - - - predicted gene 13657 [Source:MGI Symbol;Acc:MGI:3650031]
94. 2010015L04Rik 2010015L04Rik 37 0.894 - - 0.894 - - -
95. Gm14857 ENSMUSG00000081289 2 0.893 - - - - 0.893 - predicted gene 14857 [Source:MGI Symbol;Acc:MGI:3716318]
96. Gm25914 ENSMUSG00000088243 1 0.893 - - - - 0.893 - predicted gene, 25914 [Source:MGI Symbol;Acc:MGI:5455691]
97. Gm13613 ENSMUSG00000086819 36 0.893 - - - - 0.893 - predicted gene 13613 [Source:MGI Symbol;Acc:MGI:3650687]
98. Ppef1 ENSMUSG00000062168 2 0.893 - - - - 0.893 - protein phosphatase with EF hand calcium-binding domain 1 [Source:MGI Symbol;Acc:MGI:1097157]
99. Gm12094 ENSMUSG00000080851 3 0.893 - - - - 0.893 - predicted gene 12094 [Source:MGI Symbol;Acc:MGI:3650094]
100. Gm14273 ENSMUSG00000085905 3 0.893 - - - - 0.893 - predicted gene 14273 [Source:MGI Symbol;Acc:MGI:3649600]

There are 143 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA