Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Hmgb1-ps1

Gene Name Gene ID Reads Annotation
Hmgb1-ps1 ENSMUSG00000084129 4 high mobility group box 1, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3768536]







Genes with expression patterns similar to Hmgb1-ps1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hmgb1-ps1 ENSMUSG00000084129 4 3 1.000 - 1.000 - 1.000 - high mobility group box 1, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3768536]
2. Slc22a8 ENSMUSG00000063796 10 1.533 0.735 - - - 0.798 - solute carrier family 22 (organic anion transporter), member 8 [Source:MGI Symbol;Acc:MGI:1336187]
3. Gm11688 ENSMUSG00000082436 7 1 1.000 - - - - - predicted gene 11688 [Source:MGI Symbol;Acc:MGI:3650868]
4. Gm19807 ENSMUSG00000092223 38 0.968 - - - - 0.968 - predicted gene, 19807 [Source:MGI Symbol;Acc:MGI:5011992]
5. Xirp1 ENSMUSG00000079243 19 0.942 0.942 - - - - - xin actin-binding repeat containing 1 [Source:MGI Symbol;Acc:MGI:1333878]
6. 4933416C03Rik ENSMUSG00000074734 1 0.936 0.936 - - - - - RIKEN cDNA 4933416C03 gene [Source:MGI Symbol;Acc:MGI:3588269]
7. Glra2 ENSMUSG00000018589 17 0.936 0.936 - - - - - glycine receptor, alpha 2 subunit [Source:MGI Symbol;Acc:MGI:95748]
8. Gm26543 ENSMUSG00000097884 1 0.936 0.936 - - - - - predicted gene, 26543 [Source:MGI Symbol;Acc:MGI:5477037]
9. Gm26225 ENSMUSG00000064442 3 0.936 0.936 - - - - - predicted gene, 26225 [Source:MGI Symbol;Acc:MGI:5456002]
10. 2900041M22Rik ENSMUSG00000054418 6 0.936 0.936 - - - - - RIKEN cDNA 2900041M22 gene [Source:MGI Symbol;Acc:MGI:1925653]
11. Henmt1 ENSMUSG00000045662 10 0.936 0.936 - - - - - HEN1 methyltransferase homolog 1 (Arabidopsis) [Source:MGI Symbol;Acc:MGI:1913965]
12. Gm26592 ENSMUSG00000097535 2 0.936 0.936 - - - - - predicted gene, 26592 [Source:MGI Symbol;Acc:MGI:5477086]
13. Gper1 ENSMUSG00000053647 13 0.936 0.936 - - - - - G protein-coupled estrogen receptor 1 [Source:MGI Symbol;Acc:MGI:1924104]
14. Gm12412 ENSMUSG00000083685 7 0.936 0.936 - - - - - predicted gene 12412 [Source:MGI Symbol;Acc:MGI:3649919]
15. Gm6288 ENSMUSG00000072660 2 0.936 0.936 - - - - - predicted gene 6288 [Source:MGI Symbol;Acc:MGI:3646376]
16. A830035O19Rik ENSMUSG00000111329 3 0.936 0.936 - - - - - RIKEN cDNA A830035O19 gene [Source:MGI Symbol;Acc:MGI:3704334]
17. Gm12827 ENSMUSG00000087228 2 0.936 0.936 - - - - - predicted gene 12827 [Source:MGI Symbol;Acc:MGI:3651358]
18. A530010F05Rik ENSMUSG00000085797 2 0.936 0.936 - - - - - RIKEN cDNA A530010F05 gene [Source:MGI Symbol;Acc:MGI:2685406]
19. 1700046C09Rik ENSMUSG00000085561 1 0.936 0.936 - - - - - RIKEN cDNA 1700046C09 gene [Source:MGI Symbol;Acc:MGI:1920557]
20. Gm11675 ENSMUSG00000082272 10 0.936 0.936 - - - - - predicted gene 11675 [Source:MGI Symbol;Acc:MGI:3650970]
21. 9230116N13Rik ENSMUSG00000097403 5 0.936 0.936 - - - - - RIKEN cDNA 9230116N13 gene [Source:MGI Symbol;Acc:MGI:2443255]
22. Gm15626 ENSMUSG00000081822 8 0.936 0.936 - - - - - predicted gene 15626 [Source:MGI Symbol;Acc:MGI:3783070]
23. 1100001G20Rik 1100001G20Rik 1 0.936 0.936 - - - - -
24. Tmem182 ENSMUSG00000079588 3 0.936 0.936 - - - - - transmembrane protein 182 [Source:MGI Symbol;Acc:MGI:1923725]
25. Abcc3 ENSMUSG00000020865 75 0.936 0.936 - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 3 [Source:MGI Symbol;Acc:MGI:1923658]
26. Gm13437 ENSMUSG00000083431 1 0.936 0.936 - - - - - predicted gene 13437 [Source:MGI Symbol;Acc:MGI:3652333]
27. 1700061G19Rik ENSMUSG00000024209 1 0.936 0.936 - - - - - RIKEN cDNA 1700061G19 gene [Source:MGI Symbol;Acc:MGI:1925875]
28. Sim2 ENSMUSG00000062713 63 0.936 0.936 - - - - - single-minded family bHLH transcription factor 2 [Source:MGI Symbol;Acc:MGI:98307]
29. Gm15071 ENSMUSG00000081635 4 0.936 0.936 - - - - - predicted gene 15071 [Source:MGI Symbol;Acc:MGI:3705503]
30. Rpl39l ENSMUSG00000039209 28 0.936 0.936 - - - - - ribosomal protein L39-like [Source:MGI Symbol;Acc:MGI:1915422]
31. Snora16a ENSMUSG00000065097, ENSMUSG00000105911 1 0.936 0.936 - - - - - small nucleolar RNA, H/ACA box 16A [Source:MGI Symbol;Acc:MGI:4361141]
32. Gm12460 ENSMUSG00000084116 6 0.936 0.936 - - - - - predicted gene 12460 [Source:MGI Symbol;Acc:MGI:3650440]
33. Psapl1 ENSMUSG00000043430 2 0.936 0.936 - - - - - prosaposin-like 1 [Source:MGI Symbol;Acc:MGI:1924193]
34. Gm12374 ENSMUSG00000086026 5 0.936 0.936 - - - - - predicted gene 12374 [Source:MGI Symbol;Acc:MGI:3652319]
35. Zfp235 ENSMUSG00000047603 2 0.936 0.936 - - - - - zinc finger protein 235 [Source:MGI Symbol;Acc:MGI:1929117]
36. Gm12983 ENSMUSG00000087270 3 0.936 0.936 - - - - - predicted gene 12983 [Source:MGI Symbol;Acc:MGI:3651378]
37. Pet117 ENSMUSG00000098387 2 0.936 0.936 - - - - - PET117 homolog [Source:MGI Symbol;Acc:MGI:5295678]
38. Gm15232 ENSMUSG00000084806 13 0.936 0.936 - - - - - predicted gene 15232 [Source:MGI Symbol;Acc:MGI:3705117]
39. Mettl21c ENSMUSG00000047343 13 0.936 0.936 - - - - - methyltransferase like 21C [Source:MGI Symbol;Acc:MGI:3611450]
40. Gpr22 ENSMUSG00000044067 21 0.936 0.936 - - - - - G protein-coupled receptor 22 [Source:MGI Symbol;Acc:MGI:1920260]
41. Gm12909 ENSMUSG00000085404 14 0.936 0.936 - - - - - predicted gene 12909 [Source:MGI Symbol;Acc:MGI:3651135]
42. Gm12697 ENSMUSG00000082683 1 0.936 0.936 - - - - - predicted gene 12697 [Source:MGI Symbol;Acc:MGI:3651292]
43. Dupd1 ENSMUSG00000063821 7 0.936 0.936 - - - - - dual specificity phosphatase and pro isomerase domain containing 1 [Source:MGI Symbol;Acc:MGI:3647127]
44. 1110028F11Rik ENSMUSG00000085972 17 0.936 0.936 - - - - - RIKEN cDNA 1110028F11 gene [Source:MGI Symbol;Acc:MGI:1915940]
45. Ltbp2 ENSMUSG00000002020 8 0.892 0.892 - - - - - latent transforming growth factor beta binding protein 2 [Source:MGI Symbol;Acc:MGI:99502]
46. Kcnj10 ENSMUSG00000044708 84 0.883 0.883 - - - - - potassium inwardly-rectifying channel, subfamily J, member 10 [Source:MGI Symbol;Acc:MGI:1194504]
47. Csmd1 ENSMUSG00000060924 7 0.876 - - - - 0.876 - CUB and Sushi multiple domains 1 [Source:MGI Symbol;Acc:MGI:2137383]
48. Wfdc1 ENSMUSG00000023336 28 0.872 - - - - 0.872 - WAP four-disulfide core domain 1 [Source:MGI Symbol;Acc:MGI:1915116]
49. Otor ENSMUSG00000027416 53 0.855 0.855 - - - - - otoraplin [Source:MGI Symbol;Acc:MGI:1888678]
50. Gpr171 ENSMUSG00000050075 22 0.851 - - - - 0.851 - G protein-coupled receptor 171 [Source:MGI Symbol;Acc:MGI:2442043]
51. Gm15556 ENSMUSG00000085932, ENSMUSG00000116313 4 0.851 - - - - 0.851 - predicted gene 15556 [Source:MGI Symbol;Acc:MGI:3783005]
52. Gm13010 ENSMUSG00000086845 3 0.851 - - - - 0.851 - predicted gene 13010 [Source:MGI Symbol;Acc:MGI:3651180]
53. 9030624G23Rik ENSMUSG00000073158 5 0.851 - - - - 0.851 - RIKEN cDNA 9030624G23 gene [Source:MGI Symbol;Acc:MGI:1914058]
54. Gm11769 ENSMUSG00000085636 3 0.851 - - - - 0.851 - predicted gene 11769 [Source:MGI Symbol;Acc:MGI:3702101]
55. Bmp3 ENSMUSG00000029335 15 0.851 - - - - 0.851 - bone morphogenetic protein 3 [Source:MGI Symbol;Acc:MGI:88179]
56. 1700003E16Rik ENSMUSG00000030030 2 0.851 - - - - 0.851 - RIKEN cDNA 1700003E16 gene [Source:MGI Symbol;Acc:MGI:1919087]
57. Gm4221 ENSMUSG00000096948 9 0.851 - - - - 0.851 - predicted gene 4221 [Source:MGI Symbol;Acc:MGI:3782397]
58. Zfp366 ENSMUSG00000050919 2 0.851 - - - - 0.851 - zinc finger protein 366 [Source:MGI Symbol;Acc:MGI:2178429]
59. A430057M04Rik ENSMUSG00000090564 3 0.851 - - - - 0.851 - RIKEN cDNA A430057M04 gene [Source:MGI Symbol;Acc:MGI:2442125]
60. Gm6802 ENSMUSG00000059229 10 0.851 - - - - 0.851 - predicted gene 6802 [Source:MGI Symbol;Acc:MGI:3646076]
61. Gm12020 ENSMUSG00000081302 15 0.851 - - - - 0.851 - predicted gene 12020 [Source:MGI Symbol;Acc:MGI:3650978]
62. 1810010K12Rik ENSMUSG00000056329 8 0.851 - - - - 0.851 - RIKEN cDNA 1810010K12 gene [Source:MGI Symbol;Acc:MGI:1921419]
63. 9530080O11Rik ENSMUSG00000044125 2 0.851 - - - - 0.851 - RIKEN cDNA 9530080O11 gene [Source:MGI Symbol;Acc:MGI:2441751]
64. Gm14275 ENSMUSG00000085949 4 0.851 - - - - 0.851 - predicted gene 14275 [Source:MGI Symbol;Acc:MGI:3649537]
65. Rps2-ps4 ENSMUSG00000084373 7 0.851 - - - - 0.851 - ribosomal protein S2, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3651115]
66. Gm973 ENSMUSG00000047361 11 0.84 0.840 - - - - - predicted gene 973 [Source:MGI Symbol;Acc:MGI:2685819]
67. Fmo1 ENSMUSG00000040181 39 0.832 - - - - 0.832 - flavin containing monooxygenase 1 [Source:MGI Symbol;Acc:MGI:1310002]
68. Gm2990 ENSMUSG00000097794 46 0.823 0.823 - - - - - predicted gene 2990 [Source:MGI Symbol;Acc:MGI:3781168]
69. Napsa ENSMUSG00000002204 8 0.818 0.818 - - - - - napsin A aspartic peptidase [Source:MGI Symbol;Acc:MGI:109365]
70. Gm20705 ENSMUSG00000093559 4 0.818 0.818 - - - - - predicted gene 20705 [Source:MGI Symbol;Acc:MGI:5313152]
71. Grm5 ENSMUSG00000049583 4 0.818 0.818 - - - - - glutamate receptor, metabotropic 5 [Source:MGI Symbol;Acc:MGI:1351342]
72. Gm26577 ENSMUSG00000097923 6 0.818 0.818 - - - - - predicted gene, 26577 [Source:MGI Symbol;Acc:MGI:5477071]
73. B230369F24Rik ENSMUSG00000086350, ENSMUSG00000111408 45 0.816 0.816 - - - - - RIKEN cDNA B230369F24 gene [Source:MGI Symbol;Acc:MGI:2443392]
74. Mpl ENSMUSG00000006389 46 0.813 - - - - 0.813 - myeloproliferative leukemia virus oncogene [Source:MGI Symbol;Acc:MGI:97076]
75. Cidea ENSMUSG00000024526 20 0.811 - - - - 0.811 - cell death-inducing DNA fragmentation factor, alpha subunit-like effector A [Source:MGI Symbol;Acc:MGI:1270845]
76. Gm9855 ENSMUSG00000085666 14 0.804 0.804 - - - - - predicted pseudogene 9855 [Source:MGI Symbol;Acc:MGI:3704357]
77. Klhl1 ENSMUSG00000022076 8 0.799 0.799 - - - - - kelch-like 1 [Source:MGI Symbol;Acc:MGI:2136335]
78. Ankar ENSMUSG00000039342 2 0.799 0.799 - - - - - ankyrin and armadillo repeat containing [Source:MGI Symbol;Acc:MGI:2442559]
79. Cntn5 ENSMUSG00000039488 15 0.798 0.798 - - - - - contactin 5 [Source:MGI Symbol;Acc:MGI:3042287]
80. Rpl31-ps17 ENSMUSG00000072255 48 0.795 - - - - 0.795 - ribosomal protein L31, pseudogene 17 [Source:MGI Symbol;Acc:MGI:3648194]
81. Eci3 ENSMUSG00000021416 19 0.795 - - - - 0.795 - enoyl-Coenzyme A delta isomerase 3 [Source:MGI Symbol;Acc:MGI:1916373]
82. Gm9013 ENSMUSG00000087286 52 0.792 - - - - 0.792 - predicted gene 9013 [Source:MGI Symbol;Acc:MGI:3646930]
83. Ucma ENSMUSG00000026668 7 0.791 - - - - 0.791 - upper zone of growth plate and cartilage matrix associated [Source:MGI Symbol;Acc:MGI:1915777]
84. Gm20482 ENSMUSG00000092490 14 0.791 - - - - 0.791 - predicted gene 20482 [Source:MGI Symbol;Acc:MGI:5141947]
85. Sgca ENSMUSG00000001508 22 0.789 0.789 - - - - - sarcoglycan, alpha (dystrophin-associated glycoprotein) [Source:MGI Symbol;Acc:MGI:894698]
86. Gm25395 ENSMUSG00000087968 43 0.789 - - - - 0.789 - predicted gene, 25395 [Source:MGI Symbol;Acc:MGI:5455172]
87. Gm12312 ENSMUSG00000082145 22 0.787 - - - - 0.787 - predicted gene 12312 [Source:MGI Symbol;Acc:MGI:3649321]
88. Gm12408 ENSMUSG00000085980 33 0.784 0.784 - - - - - predicted gene 12408 [Source:MGI Symbol;Acc:MGI:3649921]
89. Lrguk ENSMUSG00000056215 3 0.78 0.780 - - - - - leucine-rich repeats and guanylate kinase domain containing [Source:MGI Symbol;Acc:MGI:1921604]
90. Hist2h2bb ENSMUSG00000105827 20 0.775 0.775 - - - - - histone cluster 2, H2bb [Source:MGI Symbol;Acc:MGI:2448413]
91. Gpr174 ENSMUSG00000073008 3 0.775 0.775 - - - - - G protein-coupled receptor 174 [Source:MGI Symbol;Acc:MGI:2685222]
92. RP23-220D12.12 RP23-220D12.12 2 0.775 0.775 - - - - -
93. Gm7429 ENSMUSG00000082260 31 0.775 0.775 - - - - - predicted pseudogene 7429 [Source:MGI Symbol;Acc:MGI:3647718]
94. Rorb ENSMUSG00000036192 67 0.766 0.766 - - - - - RAR-related orphan receptor beta [Source:MGI Symbol;Acc:MGI:1343464]
95. Serpina10 ENSMUSG00000061947 10 0.763 - - 0.763 - - - serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10 [Source:MGI Symbol;Acc:MGI:2667725]
96. Glp2r ENSMUSG00000049928 10 0.763 - - 0.763 - - - glucagon-like peptide 2 receptor [Source:MGI Symbol;Acc:MGI:2136733]
97. Ffar3 ENSMUSG00000019429 0 0.763 - - 0.763 - - - free fatty acid receptor 3 [Source:MGI Symbol;Acc:MGI:2685324]
98. Gm4952 ENSMUSG00000071633 4 0.763 - - 0.763 - - - predicted gene 4952 [Source:MGI Symbol;Acc:MGI:3643569]
99. Apba1 ENSMUSG00000024897 107 0.761 0.761 - - - - - amyloid beta (A4) precursor protein binding, family A, member 1 [Source:MGI Symbol;Acc:MGI:1860297]
100. A730056A06Rik ENSMUSG00000097756 30 0.761 0.761 - - - - - RIKEN cDNA A730056A06 gene [Source:MGI Symbol;Acc:MGI:2442718]

There are 33 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA