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Results for Hmgb1

Gene Name Gene ID Reads Annotation
Hmgb1 ENSMUSG00000066551 13779 high mobility group box 1 [Source:MGI Symbol;Acc:MGI:96113]







Genes with expression patterns similar to Hmgb1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hmgb1 ENSMUSG00000066551 13779 6 1.000 1.000 1.000 1.000 1.000 1.000 high mobility group box 1 [Source:MGI Symbol;Acc:MGI:96113]
2. Zfp131 ENSMUSG00000094870 3397 0.945 - 0.945 - - - - zinc finger protein 131 [Source:MGI Symbol;Acc:MGI:1919715]
3. Rbm4b ENSMUSG00000033760 3516 0.945 - 0.945 - - - - RNA binding motif protein 4B [Source:MGI Symbol;Acc:MGI:1913954]
4. Zfp598 ENSMUSG00000041130 1825 0.938 - 0.938 - - - - zinc finger protein 598 [Source:MGI Symbol;Acc:MGI:2670965]
5. Rnf220 ENSMUSG00000028677 4821 0.934 - 0.934 - - - - ring finger protein 220 [Source:MGI Symbol;Acc:MGI:1913993]
6. Elavl1 ENSMUSG00000040028 19764 0.923 - 0.923 - - - - ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Source:MGI Symbol;Acc:MGI:1100851]
7. Dnaja2 ENSMUSG00000031701 16608 0.896 - 0.896 - - - - DnaJ heat shock protein family (Hsp40) member A2 [Source:MGI Symbol;Acc:MGI:1931882]
8. Sp1 ENSMUSG00000001280 12019 0.894 - 0.894 - - - - trans-acting transcription factor 1 [Source:MGI Symbol;Acc:MGI:98372]
9. Arpp19 ENSMUSG00000007656 6657 0.889 - 0.889 - - - - cAMP-regulated phosphoprotein 19 [Source:MGI Symbol;Acc:MGI:1891691]
10. Tia1 ENSMUSG00000071337 8425 0.882 - 0.882 - - - - cytotoxic granule-associated RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:107914]
11. Cpsf3l 1764 0.879 - 0.879 - - - - cleavage and polyadenylation specific factor 3-like, transcript variant X2
12. Phb2 ENSMUSG00000004264 4535 0.878 - 0.878 - - - - prohibitin 2 [Source:MGI Symbol;Acc:MGI:102520]
13. Efna4 ENSMUSG00000028040 2079 0.877 - 0.877 - - - - ephrin A4 [Source:MGI Symbol;Acc:MGI:106643]
14. Gm9385 ENSMUSG00000080848 4881 0.877 - 0.877 - - - - predicted pseudogene 9385 [Source:MGI Symbol;Acc:MGI:3646182]
15. Eef1e1 ENSMUSG00000001707 2763 0.876 - 0.876 - - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:MGI Symbol;Acc:MGI:1913393]
16. Pfkl ENSMUSG00000020277 2200 0.875 - 0.875 - - - - phosphofructokinase, liver, B-type [Source:MGI Symbol;Acc:MGI:97547]
17. Atpaf2 ENSMUSG00000042709 993 0.874 - 0.874 - - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:MGI Symbol;Acc:MGI:2180561]
18. Lrrfip2 ENSMUSG00000032497 1432 0.873 - 0.873 - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:MGI Symbol;Acc:MGI:1918518]
19. Bach1 ENSMUSG00000025612 3433 0.873 - 0.873 - - - - BTB and CNC homology 1, basic leucine zipper transcription factor 1 [Source:MGI Symbol;Acc:MGI:894680]
20. Ube4a ENSMUSG00000059890 1421 0.873 - 0.873 - - - - ubiquitination factor E4A [Source:MGI Symbol;Acc:MGI:2154580]
21. Vamp2 ENSMUSG00000020894 1819 0.872 - 0.872 - - - - vesicle-associated membrane protein 2 [Source:MGI Symbol;Acc:MGI:1313277]
22. Papss1 ENSMUSG00000028032 2736 0.872 - 0.872 - - - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:MGI Symbol;Acc:MGI:1330587]
23. Rnf168 ENSMUSG00000014074 2298 0.872 - 0.872 - - - - ring finger protein 168 [Source:MGI Symbol;Acc:MGI:1917488]
24. 1700021K19Rik 1700021K19Rik 830 0.871 - 0.871 - - - -
25. 0610011F06Rik 1655 0.871 - 0.871 - - - - RIKEN cDNA 0610011F06 gene
26. Tbc1d7 ENSMUSG00000021368 930 0.871 - 0.871 - - - - TBC1 domain family, member 7 [Source:MGI Symbol;Acc:MGI:1914296]
27. Sh3bp5 ENSMUSG00000021892 2847 0.87 - 0.870 - - - - SH3-domain binding protein 5 (BTK-associated) [Source:MGI Symbol;Acc:MGI:1344391]
28. Trafd1 ENSMUSG00000042726 1594 0.87 - 0.870 - - - - TRAF type zinc finger domain containing 1 [Source:MGI Symbol;Acc:MGI:1923551]
29. Nfatc4 ENSMUSG00000023411 1084 0.87 - 0.870 - - - - nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 4 [Source:MGI Symbol;Acc:MGI:1920431]
30. Plce1 ENSMUSG00000024998 1051 0.87 - 0.870 - - - - phospholipase C, epsilon 1 [Source:MGI Symbol;Acc:MGI:1921305]
31. Zfp825 ENSMUSG00000069208 1108 0.87 - 0.870 - - - - zinc finger protein 825 [Source:MGI Symbol;Acc:MGI:2385315]
32. Adamts3 ENSMUSG00000043635 540 0.87 - 0.870 - - - - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3 [Source:MGI Symbol;Acc:MGI:3045353]
33. Myo9b ENSMUSG00000004677 902 0.87 - 0.870 - - - - myosin IXb [Source:MGI Symbol;Acc:MGI:106624]
34. Thoc6 ENSMUSG00000041319 1276 0.87 - 0.870 - - - - THO complex 6 [Source:MGI Symbol;Acc:MGI:2677480]
35. Ccdc9 ENSMUSG00000041375 2256 0.87 - 0.870 - - - - coiled-coil domain containing 9 [Source:MGI Symbol;Acc:MGI:1921443]
36. Gm22906 ENSMUSG00000092932 830 0.87 - 0.870 - - - - predicted gene, 22906 [Source:MGI Symbol;Acc:MGI:5452683]
37. Fbxo33 ENSMUSG00000035329 946 0.869 - 0.869 - - - - F-box protein 33 [Source:MGI Symbol;Acc:MGI:1917861]
38. Gata3 ENSMUSG00000015619 847 0.869 - 0.869 - - - - GATA binding protein 3 [Source:MGI Symbol;Acc:MGI:95663]
39. Map3k2 ENSMUSG00000024383 1064 0.869 - 0.869 - - - - mitogen-activated protein kinase kinase kinase 2 [Source:MGI Symbol;Acc:MGI:1346873]
40. Tbc1d9b ENSMUSG00000036644 1557 0.869 - 0.869 - - - - TBC1 domain family, member 9B [Source:MGI Symbol;Acc:MGI:1924045]
41. Gm1673 ENSMUSG00000070858 2674 0.869 - 0.869 - - - - predicted gene 1673 [Source:MGI Symbol;Acc:MGI:2686519]
42. Gm14017 ENSMUSG00000081967 689 0.869 - 0.869 - - - - predicted gene 14017 [Source:MGI Symbol;Acc:MGI:3702155]
43. Nit1 ENSMUSG00000013997 660 0.869 - 0.869 - - - - nitrilase 1 [Source:MGI Symbol;Acc:MGI:1350916]
44. Rab5c ENSMUSG00000019173 2129 0.869 - 0.869 - - - - RAB5C, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:105306]
45. Gdpd1 ENSMUSG00000061666 1642 0.869 - 0.869 - - - - glycerophosphodiester phosphodiesterase domain containing 1 [Source:MGI Symbol;Acc:MGI:1913819]
46. Samd10 ENSMUSG00000038605 1636 0.869 - 0.869 - - - - sterile alpha motif domain containing 10 [Source:MGI Symbol;Acc:MGI:2443872]
47. Neurl3 ENSMUSG00000047180 402 0.869 - 0.869 - - - - neuralized E3 ubiquitin protein ligase 3 [Source:MGI Symbol;Acc:MGI:2429944]
48. Mapkap1 ENSMUSG00000038696 3140 0.869 - 0.869 - - - - mitogen-activated protein kinase associated protein 1 [Source:MGI Symbol;Acc:MGI:2444554]
49. Mast3 ENSMUSG00000031833, ENSMUSG00000110763 679 0.868 - 0.868 - - - - microtubule associated serine/threonine kinase 3 [Source:MGI Symbol;Acc:MGI:2683541]
50. Ctse ENSMUSG00000004552 552 0.868 - 0.868 - - - - cathepsin E [Source:MGI Symbol;Acc:MGI:107361]
51. Hnf4a ENSMUSG00000017950 358 0.868 - 0.868 - - - - hepatic nuclear factor 4, alpha [Source:MGI Symbol;Acc:MGI:109128]
52. Jrk ENSMUSG00000046380 696 0.868 - 0.868 - - - - jerky [Source:MGI Symbol;Acc:MGI:106214]
53. Fubp3 ENSMUSG00000026843 2442 0.867 - 0.867 - - - - far upstream element (FUSE) binding protein 3 [Source:MGI Symbol;Acc:MGI:2443699]
54. Gcn1l1 ENSMUSG00000041638 2104 0.867 - 0.867 - - - - GCN1 general control of amino-acid synthesis 1-like 1 (yeast) [Source:MGI Symbol;Acc:MGI:2444248]
55. Cep135 ENSMUSG00000036403 1133 0.866 - 0.866 - - - - centrosomal protein 135 [Source:MGI Symbol;Acc:MGI:2681869]
56. Tox2 ENSMUSG00000074607 717 0.866 - 0.866 - - - - TOX high mobility group box family member 2 [Source:MGI Symbol;Acc:MGI:3611233]
57. Pttg1ip ENSMUSG00000009291 2159 0.865 - 0.865 - - - - pituitary tumor-transforming 1 interacting protein [Source:MGI Symbol;Acc:MGI:2652132]
58. Zfp81 ENSMUSG00000003929 1819 0.864 - 0.864 - - - - zinc finger protein 81 [Source:MGI Symbol;Acc:MGI:1890752]
59. Mrps25 ENSMUSG00000014551 1972 0.864 - 0.864 - - - - mitochondrial ribosomal protein S25 [Source:MGI Symbol;Acc:MGI:1928140]
60. Snrpa ENSMUSG00000061479 4828 0.864 - 0.864 - - - - small nuclear ribonucleoprotein polypeptide A [Source:MGI Symbol;Acc:MGI:1855690]
61. Psmc2 ENSMUSG00000028932 6789 0.863 - 0.863 - - - - proteasome (prosome, macropain) 26S subunit, ATPase 2 [Source:MGI Symbol;Acc:MGI:109555]
62. H2afv ENSMUSG00000041126 16296 0.863 - 0.863 - - - - H2A histone family, member V [Source:MGI Symbol;Acc:MGI:1924855]
63. Msh6 ENSMUSG00000005370 4347 0.862 - 0.862 - - - - mutS homolog 6 [Source:MGI Symbol;Acc:MGI:1343961]
64. Cnpy2 ENSMUSG00000025381 4468 0.861 - 0.861 - - - - canopy FGF signaling regulator 2 [Source:MGI Symbol;Acc:MGI:1928477]
65. Baz2a ENSMUSG00000040054 1653 0.861 - 0.861 - - - - bromodomain adjacent to zinc finger domain, 2A [Source:MGI Symbol;Acc:MGI:2151152]
66. Matr3 ENSMUSG00000037236 11220 0.861 - 0.861 - - - - matrin 3 [Source:MGI Symbol;Acc:MGI:1298379]
67. Alg11 ENSMUSG00000063362 3651 0.859 - 0.859 - - - - asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) [Source:MGI Symbol;Acc:MGI:2142632]
68. Gm26905 ENSMUSG00000097695 6535 0.858 - 0.858 - - - - predicted gene, 26905 [Source:MGI Symbol;Acc:MGI:5477399]
69. Gna12 ENSMUSG00000000149 2886 0.857 - 0.857 - - - - guanine nucleotide binding protein, alpha 12 [Source:MGI Symbol;Acc:MGI:95767]
70. Ubr4 ENSMUSG00000066036 3260 0.857 - 0.857 - - - - ubiquitin protein ligase E3 component n-recognin 4 [Source:MGI Symbol;Acc:MGI:1916366]
71. Anxa6 ENSMUSG00000018340 3644 0.857 - 0.857 - - - - annexin A6 [Source:MGI Symbol;Acc:MGI:88255]
72. Cwc15 ENSMUSG00000004096 5974 0.856 - 0.856 - - - - CWC15 spliceosome-associated protein [Source:MGI Symbol;Acc:MGI:1913320]
73. Uvssa ENSMUSG00000037355 1218 0.856 - 0.856 - - - - UV stimulated scaffold protein A [Source:MGI Symbol;Acc:MGI:1918351]
74. Rpa2 ENSMUSG00000028884 4921 0.855 - 0.855 - - - - replication protein A2 [Source:MGI Symbol;Acc:MGI:1339939]
75. Mast4 ENSMUSG00000034751 3279 0.855 - 0.855 - - - - microtubule associated serine/threonine kinase family member 4 [Source:MGI Symbol;Acc:MGI:1918885]
76. Ncor2 ENSMUSG00000029478 2488 0.855 - 0.855 - - - - nuclear receptor co-repressor 2 [Source:MGI Symbol;Acc:MGI:1337080]
77. Mcm6 ENSMUSG00000026355 8251 0.854 - 0.854 - - - - minichromosome maintenance complex component 6 [Source:MGI Symbol;Acc:MGI:1298227]
78. Nup107 ENSMUSG00000052798 3216 0.852 - 0.852 - - - - nucleoporin 107 [Source:MGI Symbol;Acc:MGI:2143854]
79. Prpf18 ENSMUSG00000039449 1985 0.852 - 0.852 - - - - pre-mRNA processing factor 18 [Source:MGI Symbol;Acc:MGI:1914479]
80. Stx16 ENSMUSG00000027522 2813 0.852 - 0.852 - - - - syntaxin 16 [Source:MGI Symbol;Acc:MGI:1923396]
81. Crip2 ENSMUSG00000006356 4180 0.851 - 0.851 - - - - cysteine rich protein 2 [Source:MGI Symbol;Acc:MGI:1915587]
82. Tmbim6 ENSMUSG00000023010 7081 0.85 - 0.850 - - - - transmembrane BAX inhibitor motif containing 6 [Source:MGI Symbol;Acc:MGI:99682]
83. Psmb6 ENSMUSG00000018286 7753 0.85 - 0.850 - - - - proteasome (prosome, macropain) subunit, beta type 6 [Source:MGI Symbol;Acc:MGI:104880]
84. Dpp3 ENSMUSG00000063904 4642 0.849 - 0.849 - - - - dipeptidylpeptidase 3 [Source:MGI Symbol;Acc:MGI:1922471]
85. Gm13292 ENSMUSG00000082424 9265 0.849 - 0.849 - - - - predicted gene 13292 [Source:MGI Symbol;Acc:MGI:3649470]
86. Armcx4 ENSMUSG00000049804 5793 0.847 - 0.847 - - - - armadillo repeat containing, X-linked 4 [Source:MGI Symbol;Acc:MGI:2147887]
87. Trim33 ENSMUSG00000033014 3606 0.847 - 0.847 - - - - tripartite motif-containing 33 [Source:MGI Symbol;Acc:MGI:2137357]
88. Ranbp10 ENSMUSG00000037415 1474 0.847 - 0.847 - - - - RAN binding protein 10 [Source:MGI Symbol;Acc:MGI:1921584]
89. Tomm40 ENSMUSG00000002984 3250 0.845 - 0.845 - - - - translocase of outer mitochondrial membrane 40 [Source:MGI Symbol;Acc:MGI:1858259]
90. 8430429K09Rik ENSMUSG00000034587 679 0.844 - 0.844 - - - - RIKEN cDNA 8430429K09 gene [Source:MGI Symbol;Acc:MGI:1918773]
91. Gm5617 ENSMUSG00000042293 688 0.842 - 0.842 - - - - predicted gene 5617 [Source:MGI Symbol;Acc:MGI:3643566]
92. Rmnd5a ENSMUSG00000002222 2290 0.841 - 0.841 - - - - required for meiotic nuclear division 5 homolog A [Source:MGI Symbol;Acc:MGI:1915727]
93. A430005L14Rik ENSMUSG00000047613 1070 0.84 - 0.840 - - - - RIKEN cDNA A430005L14 gene [Source:MGI Symbol;Acc:MGI:2140680]
94. Med19 ENSMUSG00000027080 2493 0.84 - 0.840 - - - - mediator complex subunit 19 [Source:MGI Symbol;Acc:MGI:1914234]
95. Tmx3 ENSMUSG00000024614 1503 0.838 - 0.838 - - - - thioredoxin-related transmembrane protein 3 [Source:MGI Symbol;Acc:MGI:2442418]
96. Cdkn1c ENSMUSG00000037664 49550 0.836 - 0.836 - - - - cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
97. Sipa1 ENSMUSG00000056917 2263 0.835 - 0.835 - - - - signal-induced proliferation associated gene 1 [Source:MGI Symbol;Acc:MGI:107576]
98. Usp47 ENSMUSG00000059263 7199 0.832 - 0.832 - - - - ubiquitin specific peptidase 47 [Source:MGI Symbol;Acc:MGI:1922246]
99. Ppp2r1a ENSMUSG00000007564 9626 0.831 - 0.831 - - - - protein phosphatase 2, regulatory subunit A, alpha [Source:MGI Symbol;Acc:MGI:1926334]
100. Gm7536 ENSMUSG00000057036 14302 0.831 - 0.831 - - - - predicted gene 7536 [Source:MGI Symbol;Acc:MGI:3645137]

There are 108 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA