Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Hmbox1

Gene Name Gene ID Reads Annotation
Hmbox1 ENSMUSG00000021972 1590 homeobox containing 1 [Source:MGI Symbol;Acc:MGI:2445066]







Genes with expression patterns similar to Hmbox1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hmbox1 ENSMUSG00000021972 1590 6 1.000 1.000 1.000 1.000 1.000 1.000 homeobox containing 1 [Source:MGI Symbol;Acc:MGI:2445066]
2. Athl1 572 0.823 - 0.823 - - - - ATH1, acid trehalase-like 1 (yeast), transcript variant X6
3. Lats2 ENSMUSG00000021959 2203 0.815 - 0.815 - - - - large tumor suppressor 2 [Source:MGI Symbol;Acc:MGI:1354386]
4. Krt7 ENSMUSG00000023039 391 0.806 - 0.806 - - - - keratin 7 [Source:MGI Symbol;Acc:MGI:96704]
5. Ptgr1 ENSMUSG00000028378 1108 0.805 - 0.805 - - - - prostaglandin reductase 1 [Source:MGI Symbol;Acc:MGI:1914353]
6. Fam103a1 1569 0.805 - 0.805 - - - - family with sequence similarity 103, member A1
7. Mier2 ENSMUSG00000042570 1463 0.804 - 0.804 - - - - MIER family member 2 [Source:MGI Symbol;Acc:MGI:1917677]
8. Ppfia4 ENSMUSG00000026458 347 0.803 - 0.803 - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 [Source:MGI Symbol;Acc:MGI:1915757]
9. Filip1l ENSMUSG00000043336 937 0.801 - 0.801 - - - - filamin A interacting protein 1-like [Source:MGI Symbol;Acc:MGI:1925999]
10. Mafg ENSMUSG00000051510 3180 0.8 - 0.800 - - - - v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) [Source:MGI Symbol;Acc:MGI:96911]
11. Nrros ENSMUSG00000052384 234 0.798 - 0.798 - - - - negative regulator of reactive oxygen species [Source:MGI Symbol;Acc:MGI:2445095]
12. Bves ENSMUSG00000071317 201 0.798 - 0.798 - - - - blood vessel epicardial substance [Source:MGI Symbol;Acc:MGI:1346013]
13. Rfx1 ENSMUSG00000031706 2325 0.793 - 0.793 - - - - regulatory factor X, 1 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:105982]
14. Gm5532 ENSMUSG00000073535 47 0.791 - 0.791 - - - - predicted gene 5532 [Source:MGI Symbol;Acc:MGI:3646828]
15. Tm2d3 ENSMUSG00000078681 1166 0.79 - 0.790 - - - - TM2 domain containing 3 [Source:MGI Symbol;Acc:MGI:1915884]
16. Cxx1a 290 0.789 - 0.789 - - - - CAAX box 1A
17. Decr1 ENSMUSG00000028223 841 0.789 - 0.789 - - - - 2,4-dienoyl CoA reductase 1, mitochondrial [Source:MGI Symbol;Acc:MGI:1914710]
18. Glb1l ENSMUSG00000026200 115 0.788 - 0.788 - - - - galactosidase, beta 1-like [Source:MGI Symbol;Acc:MGI:1921827]
19. Glis1 ENSMUSG00000034762 166 0.787 - 0.787 - - - - GLIS family zinc finger 1 [Source:MGI Symbol;Acc:MGI:2386723]
20. Gm16973 ENSMUSG00000097743 731 0.785 - 0.785 - - - - predicted gene, 16973 [Source:MGI Symbol;Acc:MGI:4439897]
21. Cox16 ENSMUSG00000091803 212 0.785 - 0.785 - - - - cytochrome c oxidase assembly protein 16 [Source:MGI Symbol;Acc:MGI:1913522]
22. Parp11 ENSMUSG00000037997 741 0.783 - 0.783 - - - - poly (ADP-ribose) polymerase family, member 11 [Source:MGI Symbol;Acc:MGI:2141505]
23. Perp ENSMUSG00000019851 198 0.783 - 0.783 - - - - PERP, TP53 apoptosis effector [Source:MGI Symbol;Acc:MGI:1929938]
24. Trim6 ENSMUSG00000072244 167 0.782 - 0.782 - - - - tripartite motif-containing 6 [Source:MGI Symbol;Acc:MGI:2137352]
25. Slc46a3 ENSMUSG00000029650 39 0.782 - 0.782 - - - - solute carrier family 46, member 3 [Source:MGI Symbol;Acc:MGI:1918956]
26. Satb2 ENSMUSG00000038331 158 0.78 - 0.780 - - - - special AT-rich sequence binding protein 2 [Source:MGI Symbol;Acc:MGI:2679336]
27. Znf512b Znf512b 1113 0.78 - 0.780 - - - -
28. Negr1 ENSMUSG00000040037 312 0.78 - 0.780 - - - - neuronal growth regulator 1 [Source:MGI Symbol;Acc:MGI:2444846]
29. S100a1 ENSMUSG00000044080 348 0.779 - 0.779 - - - - S100 calcium binding protein A1 [Source:MGI Symbol;Acc:MGI:1338917]
30. Ndor1 ENSMUSG00000006471, ENSMUSG00000115074 502 0.778 - 0.778 - - - - NADPH dependent diflavin oxidoreductase 1 [Source:MGI Symbol;Acc:MGI:1926047]
31. 4731419I09Rik ENSMUSG00000097004 89 0.776 - 0.776 - - - - RIKEN cDNA 4731419I09 gene [Source:MGI Symbol;Acc:MGI:3704222]
32. Gm4117 ENSMUSG00000089940 1066 0.776 - 0.776 - - - - predicted gene 4117 [Source:MGI Symbol;Acc:MGI:3782293]
33. Dlx5 ENSMUSG00000029755 23 0.775 - 0.775 - - - - distal-less homeobox 5 [Source:MGI Symbol;Acc:MGI:101926]
34. Slc40a1 ENSMUSG00000025993 484 0.775 - 0.775 - - - - solute carrier family 40 (iron-regulated transporter), member 1 [Source:MGI Symbol;Acc:MGI:1315204]
35. Ccdc93 ENSMUSG00000026339 541 0.775 - 0.775 - - - - coiled-coil domain containing 93 [Source:MGI Symbol;Acc:MGI:1918079]
36. Kcnip4 ENSMUSG00000029088 110 0.774 - 0.774 - - - - Kv channel interacting protein 4 [Source:MGI Symbol;Acc:MGI:1933131]
37. Gm17191 ENSMUSG00000091587 14 0.772 - 0.772 - - - - predicted gene 17191 [Source:MGI Symbol;Acc:MGI:4938018]
38. Fcrls ENSMUSG00000015852 76 0.772 - 0.772 - - - - Fc receptor-like S, scavenger receptor [Source:MGI Symbol;Acc:MGI:1933397]
39. Cd82 ENSMUSG00000027215 59 0.772 - 0.772 - - - - CD82 antigen [Source:MGI Symbol;Acc:MGI:104651]
40. Gm5741 ENSMUSG00000095845 17 0.772 - 0.772 - - - - predicted gene 5741 [Source:MGI Symbol;Acc:MGI:3645690]
41. Rxrb ENSMUSG00000039656 541 0.771 - 0.771 - - - - retinoid X receptor beta [Source:MGI Symbol;Acc:MGI:98215]
42. Stxbp5 ENSMUSG00000019790 377 0.771 - 0.771 - - - - syntaxin binding protein 5 (tomosyn) [Source:MGI Symbol;Acc:MGI:1926058]
43. Ehd1 ENSMUSG00000024772, ENSMUSG00000107039 1779 0.77 - 0.770 - - - - EH-domain containing 1 [Source:MGI Symbol;Acc:MGI:1341878]
44. Bax ENSMUSG00000003873 486 0.77 - 0.770 - - - - BCL2-associated X protein [Source:MGI Symbol;Acc:MGI:99702]
45. Atp10d ENSMUSG00000046808 78 0.77 - 0.770 - - - - ATPase, class V, type 10D [Source:MGI Symbol;Acc:MGI:2450125]
46. 5730577I03Rik 5730577I03Rik 79 0.77 - 0.770 - - - -
47. Angptl4 ENSMUSG00000002289 525 0.769 - 0.769 - - - - angiopoietin-like 4 [Source:MGI Symbol;Acc:MGI:1888999]
48. Zfp280c ENSMUSG00000036916 742 0.767 - 0.767 - - - - zinc finger protein 280C [Source:MGI Symbol;Acc:MGI:2387585]
49. Fads6 ENSMUSG00000044788 88 0.767 - 0.767 - - - - fatty acid desaturase domain family, member 6 [Source:MGI Symbol;Acc:MGI:3039592]
50. 3830403N18Rik ENSMUSG00000031125 31 0.766 - 0.766 - - - - RIKEN cDNA 3830403N18 gene [Source:MGI Symbol;Acc:MGI:1917941]
51. Gm14567 ENSMUSG00000080896 310 0.766 - 0.766 - - - - predicted gene 14567 [Source:MGI Symbol;Acc:MGI:3705732]
52. Pkp3 ENSMUSG00000054065 110 0.765 - 0.765 - - - - plakophilin 3 [Source:MGI Symbol;Acc:MGI:1891830]
53. Wsb2 ENSMUSG00000029364 343 0.765 - 0.765 - - - - WD repeat and SOCS box-containing 2 [Source:MGI Symbol;Acc:MGI:2144041]
54. Wdr78 ENSMUSG00000035126 268 0.765 - 0.765 - - - - WD repeat domain 78 [Source:MGI Symbol;Acc:MGI:2385328]
55. Gm7308 ENSMUSG00000081113 54 0.764 - 0.764 - - - - predicted pseudogene 7308 [Source:MGI Symbol;Acc:MGI:3644558]
56. Mmp11 ENSMUSG00000000901 695 0.764 - 0.764 - - - - matrix metallopeptidase 11 [Source:MGI Symbol;Acc:MGI:97008]
57. Gps1 ENSMUSG00000025156 287 0.763 - 0.763 - - - - G protein pathway suppressor 1 [Source:MGI Symbol;Acc:MGI:2384801]
58. Ginm1 ENSMUSG00000040006, ENSMUSG00000115999 540 0.763 - 0.763 - - - - glycoprotein integral membrane 1 [Source:MGI Symbol;Acc:MGI:2384905]
59. Rnf103 ENSMUSG00000052656 496 0.762 - 0.762 - - - - ring finger protein 103 [Source:MGI Symbol;Acc:MGI:109483]
60. Fgd3 ENSMUSG00000037946 123 0.762 - 0.762 - - - - FYVE, RhoGEF and PH domain containing 3 [Source:MGI Symbol;Acc:MGI:1353657]
61. Tdrd3 ENSMUSG00000022019 777 0.762 - 0.762 - - - - tudor domain containing 3 [Source:MGI Symbol;Acc:MGI:2444023]
62. Adamts7 ENSMUSG00000032363 501 0.762 - 0.762 - - - - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7 [Source:MGI Symbol;Acc:MGI:1347346]
63. Slc38a7 ENSMUSG00000036534 269 0.76 - 0.760 - - - - solute carrier family 38, member 7 [Source:MGI Symbol;Acc:MGI:2679005]
64. Slc15a2 ENSMUSG00000022899 126 0.76 - 0.760 - - - - solute carrier family 15 (H+/peptide transporter), member 2 [Source:MGI Symbol;Acc:MGI:1890457]
65. Itgb1bp1 ENSMUSG00000062352 1388 0.76 - 0.760 - - - - integrin beta 1 binding protein 1 [Source:MGI Symbol;Acc:MGI:1306802]
66. Gm20663 ENSMUSG00000093378 49 0.759 - 0.759 - - - - predicted gene 20663 [Source:MGI Symbol;Acc:MGI:5313110]
67. Lix1l ENSMUSG00000049288 622 0.759 0.759 - - - - - Lix1-like [Source:MGI Symbol;Acc:MGI:3036267]
68. Tlcd1 ENSMUSG00000019437 285 0.758 - 0.758 - - - - TLC domain containing 1 [Source:MGI Symbol;Acc:MGI:1915572]
69. Sppl2b ENSMUSG00000035206 541 0.757 - 0.757 - - - - signal peptide peptidase like 2B [Source:MGI Symbol;Acc:MGI:1920468]
70. Gm6768 ENSMUSG00000021908 225 0.756 - 0.756 - - - - predicted gene 6768 [Source:MGI Symbol;Acc:MGI:3648259]
71. Usp7 ENSMUSG00000022710 4581 0.756 0.756 - - - - - ubiquitin specific peptidase 7 [Source:MGI Symbol;Acc:MGI:2182061]
72. Gngt2 ENSMUSG00000038811 176 0.756 - 0.756 - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 [Source:MGI Symbol;Acc:MGI:893584]
73. Gata2 ENSMUSG00000015053 838 0.755 - 0.755 - - - - GATA binding protein 2 [Source:MGI Symbol;Acc:MGI:95662]
74. Gm19705 ENSMUSG00000097113 65 0.754 - 0.754 - - - - predicted gene, 19705 [Source:MGI Symbol;Acc:MGI:5011890]
75. Rps6ka5 ENSMUSG00000021180 94 0.753 - 0.753 - - - - ribosomal protein S6 kinase, polypeptide 5 [Source:MGI Symbol;Acc:MGI:1920336]
76. Dus2l Dus2l 540 0.753 - 0.753 - - - -
77. Elac2 ENSMUSG00000020549 799 0.751 - 0.751 - - - - elaC ribonuclease Z 2 [Source:MGI Symbol;Acc:MGI:1890496]
78. Xkr8 ENSMUSG00000037752 188 0.751 - 0.751 - - - - X-linked Kx blood group related 8 [Source:MGI Symbol;Acc:MGI:2685877]
79. Tmem55a 4303 0.75 0.750 - - - - - transmembrane protein 55A
80. Urod ENSMUSG00000028684 1096 0.748 - 0.748 - - - - uroporphyrinogen decarboxylase [Source:MGI Symbol;Acc:MGI:98916]
81. Abhd17a ENSMUSG00000003346 1482 0.748 - 0.748 - - - - abhydrolase domain containing 17A [Source:MGI Symbol;Acc:MGI:106388]
82. 2700016F22Rik ENSMUSG00000097731 59 0.747 - 0.747 - - - - RIKEN cDNA 2700016F22 gene [Source:MGI Symbol;Acc:MGI:1919807]
83. Eif5a2 ENSMUSG00000050192 1287 0.747 - 0.747 - - - - eukaryotic translation initiation factor 5A2 [Source:MGI Symbol;Acc:MGI:1933735]
84. Etnk1 ENSMUSG00000030275 3147 0.747 - 0.747 - - - - ethanolamine kinase 1 [Source:MGI Symbol;Acc:MGI:1922570]
85. Gpn2 ENSMUSG00000028848 336 0.746 - 0.746 - - - - GPN-loop GTPase 2 [Source:MGI Symbol;Acc:MGI:2140368]
86. Ppp1r3f ENSMUSG00000039556 238 0.746 - 0.746 - - - - protein phosphatase 1, regulatory subunit 3F [Source:MGI Symbol;Acc:MGI:1859617]
87. Slc25a24 ENSMUSG00000040322 2937 0.744 0.744 - - - - - solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 [Source:MGI Symbol;Acc:MGI:1917160]
88. Tsc22d2 ENSMUSG00000027806 1336 0.744 - 0.744 - - - - TSC22 domain family, member 2 [Source:MGI Symbol;Acc:MGI:1919283]
89. Sostdc1 ENSMUSG00000036169 375 0.743 - 0.743 - - - - sclerostin domain containing 1 [Source:MGI Symbol;Acc:MGI:1913292]
90. Lrrc32 ENSMUSG00000090958 175 0.743 - 0.743 - - - - leucine rich repeat containing 32 [Source:MGI Symbol;Acc:MGI:93882]
91. Dnajc24 ENSMUSG00000027166 393 0.743 - 0.743 - - - - DnaJ heat shock protein family (Hsp40) member C24 [Source:MGI Symbol;Acc:MGI:1919522]
92. Nxpe3 ENSMUSG00000075033 318 0.743 - 0.743 - - - - neurexophilin and PC-esterase domain family, member 3 [Source:MGI Symbol;Acc:MGI:2686598]
93. Ifnar2 ENSMUSG00000022971 1291 0.743 - 0.743 - - - - interferon (alpha and beta) receptor 2 [Source:MGI Symbol;Acc:MGI:1098243]
94. Mphosph9 ENSMUSG00000038126 1169 0.742 - 0.742 - - - - M-phase phosphoprotein 9 [Source:MGI Symbol;Acc:MGI:2443138]
95. Brd9 ENSMUSG00000057649 1862 0.742 - 0.742 - - - - bromodomain containing 9 [Source:MGI Symbol;Acc:MGI:2145317]
96. Sag ENSMUSG00000056055 914 0.742 - 0.742 - - - - S-antigen, retina and pineal gland (arrestin) [Source:MGI Symbol;Acc:MGI:98227]
97. Pptc7 ENSMUSG00000038582 156 0.742 - 0.742 - - - - PTC7 protein phosphatase homolog [Source:MGI Symbol;Acc:MGI:2444593]
98. Lypd6 ENSMUSG00000050447 283 0.74 - 0.740 - - - - LY6/PLAUR domain containing 6 [Source:MGI Symbol;Acc:MGI:2443848]
99. Ubap2 ENSMUSG00000028433 5289 0.74 - 0.740 - - - - ubiquitin-associated protein 2 [Source:MGI Symbol;Acc:MGI:1916176]
100. Gm16938 ENSMUSG00000097749 62 0.74 - 0.740 - - - - predicted gene, 16938 [Source:MGI Symbol;Acc:MGI:4439862]

There are 96 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA