Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Hfm1

Gene Name Gene ID Reads Annotation
Hfm1 ENSMUSG00000043410 75 HFM1, ATP-dependent DNA helicase homolog [Source:MGI Symbol;Acc:MGI:3036246]







Genes with expression patterns similar to Hfm1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hfm1 ENSMUSG00000043410 75 6 1.000 1.000 1.000 1.000 1.000 1.000 HFM1, ATP-dependent DNA helicase homolog [Source:MGI Symbol;Acc:MGI:3036246]
2. Gm16070 ENSMUSG00000085125 40 1.457 - - - - 0.707 0.750 predicted gene 16070 [Source:MGI Symbol;Acc:MGI:3801761]
3. Bmp5 ENSMUSG00000032179 12 0.904 - - 0.904 - - - bone morphogenetic protein 5 [Source:MGI Symbol;Acc:MGI:88181]
4. Map3k6 ENSMUSG00000028862 50 0.898 - - - - - 0.898 mitogen-activated protein kinase kinase kinase 6 [Source:MGI Symbol;Acc:MGI:1855691]
5. 9930013L23Rik 9930013L23Rik 21 0.891 - - 0.891 - - -
6. Npas4 ENSMUSG00000045903 62 0.886 - - 0.886 - - - neuronal PAS domain protein 4 [Source:MGI Symbol;Acc:MGI:2664186]
7. Ms4a6d ENSMUSG00000024679 33 0.881 - - 0.881 - - - membrane-spanning 4-domains, subfamily A, member 6D [Source:MGI Symbol;Acc:MGI:1916024]
8. Sprtn ENSMUSG00000031986 4 0.877 - - 0.877 - - - SprT-like N-terminal domain [Source:MGI Symbol;Acc:MGI:2685351]
9. Gpr35 ENSMUSG00000026271 17 0.876 - - 0.876 - - - G protein-coupled receptor 35 [Source:MGI Symbol;Acc:MGI:1929509]
10. Trib3 ENSMUSG00000032715 37 0.875 - - 0.875 - - - tribbles pseudokinase 3 [Source:MGI Symbol;Acc:MGI:1345675]
11. Cngb1 ENSMUSG00000031789 4 0.875 - - 0.875 - - - cyclic nucleotide gated channel beta 1 [Source:MGI Symbol;Acc:MGI:2664102]
12. Kif13b ENSMUSG00000060012 56 0.875 - - 0.875 - - - kinesin family member 13B [Source:MGI Symbol;Acc:MGI:1098265]
13. 1700029I15Rik ENSMUSG00000044916 21 0.874 - - 0.874 - - - RIKEN cDNA 1700029I15 gene [Source:MGI Symbol;Acc:MGI:1916742]
14. Gm25789 ENSMUSG00000065228 22 0.873 - - 0.873 - - - predicted gene, 25789 [Source:MGI Symbol;Acc:MGI:5455566]
15. Hcrtr2 ENSMUSG00000032360 19 0.871 - - 0.871 - - - hypocretin (orexin) receptor 2 [Source:MGI Symbol;Acc:MGI:2680765]
16. Ptpn22 ENSMUSG00000027843 17 0.871 - - 0.871 - - - protein tyrosine phosphatase, non-receptor type 22 (lymphoid) [Source:MGI Symbol;Acc:MGI:107170]
17. Gm773 ENSMUSG00000073177 2 0.869 - - 0.869 - - - predicted gene 773 [Source:MGI Symbol;Acc:MGI:2685619]
18. Gm12295 ENSMUSG00000085162 3 0.869 - - 0.869 - - - predicted gene 12295 [Source:MGI Symbol;Acc:MGI:3650535]
19. Dupd1 ENSMUSG00000063821 7 0.869 - - 0.869 - - - dual specificity phosphatase and pro isomerase domain containing 1 [Source:MGI Symbol;Acc:MGI:3647127]
20. Gm22257 ENSMUSG00000089312 2 0.869 - - 0.869 - - - predicted gene, 22257 [Source:MGI Symbol;Acc:MGI:5452034]
21. Gm11370 ENSMUSG00000081905 2 0.869 - - 0.869 - - - predicted gene 11370 [Source:MGI Symbol;Acc:MGI:3651832]
22. 1700057H21Rik ENSMUSG00000086007 2 0.869 - - 0.869 - - - RIKEN cDNA 1700057H21 gene [Source:MGI Symbol;Acc:MGI:1920625]
23. Gm20628 ENSMUSG00000093656 3 0.869 - - 0.869 - - - predicted gene 20628 [Source:MGI Symbol;Acc:MGI:5313075]
24. Prl8a6 ENSMUSG00000021345 4 0.869 - - 0.869 - - - prolactin family 8, subfamily a, member 6 [Source:MGI Symbol;Acc:MGI:1332225]
25. Gm14951 ENSMUSG00000084776 22 0.869 - - 0.869 - - - predicted gene 14951 [Source:MGI Symbol;Acc:MGI:3705251]
26. Pirb ENSMUSG00000058818 16 0.869 - - 0.869 - - - paired Ig-like receptor B [Source:MGI Symbol;Acc:MGI:894311]
27. Ugt3a2 ENSMUSG00000049152 5 0.869 - - 0.869 - - - UDP glycosyltransferases 3 family, polypeptide A2 [Source:MGI Symbol;Acc:MGI:2145969]
28. Pi4kb ENSMUSG00000038861 97 0.869 - - 0.869 - - - phosphatidylinositol 4-kinase beta [Source:MGI Symbol;Acc:MGI:1334433]
29. 2310042E22Rik 2310042E22Rik 17 0.869 - - 0.869 - - -
30. Gm25541 ENSMUSG00000080538 21 0.869 - - 0.869 - - - predicted gene, 25541 [Source:MGI Symbol;Acc:MGI:5455318]
31. Slc11a1 ENSMUSG00000026177 34 0.868 - - 0.868 - - - solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 [Source:MGI Symbol;Acc:MGI:1345275]
32. Slc6a4 ENSMUSG00000020838 67 0.866 - - - - - 0.866 solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 [Source:MGI Symbol;Acc:MGI:96285]
33. Fcna ENSMUSG00000026938 10 0.865 - - 0.865 - - - ficolin A [Source:MGI Symbol;Acc:MGI:1340905]
34. Lrrc25 ENSMUSG00000049988 4 0.865 - - 0.865 - - - leucine rich repeat containing 25 [Source:MGI Symbol;Acc:MGI:2445284]
35. Gm7416 ENSMUSG00000084031 7 0.864 - - 0.864 - - - predicted gene 7416 [Source:MGI Symbol;Acc:MGI:3647901]
36. Hpgds ENSMUSG00000029919 68 0.863 - - 0.863 - - - hematopoietic prostaglandin D synthase [Source:MGI Symbol;Acc:MGI:1859384]
37. Gm4787 ENSMUSG00000072974 15 0.862 - - 0.862 - - - predicted gene 4787 [Source:MGI Symbol;Acc:MGI:3646380]
38. Gm25520 ENSMUSG00000089014 14 0.861 - - 0.861 - - - predicted gene, 25520 [Source:MGI Symbol;Acc:MGI:5455297]
39. Gm26721 ENSMUSG00000096943 22 0.861 - - 0.861 - - - predicted gene, 26721 [Source:MGI Symbol;Acc:MGI:5477215]
40. Thap1 ENSMUSG00000037214 256 0.859 - - 0.859 - - - THAP domain containing, apoptosis associated protein 1 [Source:MGI Symbol;Acc:MGI:1921004]
41. Gm26771 ENSMUSG00000097250 8 0.859 - - 0.859 - - - predicted gene, 26771 [Source:MGI Symbol;Acc:MGI:5477265]
42. Gm5898 ENSMUSG00000081788 45 0.859 - - 0.859 - - - predicted gene 5898 [Source:MGI Symbol;Acc:MGI:3644921]
43. Camkmt ENSMUSG00000071037 246 0.856 - - - - - 0.856 calmodulin-lysine N-methyltransferase [Source:MGI Symbol;Acc:MGI:1920832]
44. Tgm5 ENSMUSG00000053675 23 0.855 - - 0.855 - - - transglutaminase 5 [Source:MGI Symbol;Acc:MGI:1921426]
45. Cxcl1 ENSMUSG00000029380 4 0.855 - - 0.855 - - - chemokine (C-X-C motif) ligand 1 [Source:MGI Symbol;Acc:MGI:108068]
46. Scn5a ENSMUSG00000032511 20 0.855 - - 0.855 - - - sodium channel, voltage-gated, type V, alpha [Source:MGI Symbol;Acc:MGI:98251]
47. Vps25 ENSMUSG00000078656 14 0.854 - - 0.854 - - - vacuolar protein sorting 25 [Source:MGI Symbol;Acc:MGI:106354]
48. H2-M5 ENSMUSG00000024459 128 0.851 - - 0.851 - - - histocompatibility 2, M region locus 5 [Source:MGI Symbol;Acc:MGI:95917]
49. E230001N04Rik ENSMUSG00000066170 39 0.847 - - 0.847 - - - RIKEN cDNA E230001N04 gene [Source:MGI Symbol;Acc:MGI:2443549]
50. Popdc3 ENSMUSG00000019848 48 0.847 - - 0.847 - - - popeye domain containing 3 [Source:MGI Symbol;Acc:MGI:1930153]
51. Gm13056 ENSMUSG00000085395 13 0.846 - - 0.846 - - - predicted gene 13056 [Source:MGI Symbol;Acc:MGI:3650725]
52. RP24-325L16.1 RP24-325L16.1 31 0.845 - - 0.845 - - -
53. A2m ENSMUSG00000030111 38 0.844 - - 0.844 - - - alpha-2-macroglobulin [Source:MGI Symbol;Acc:MGI:2449119]
54. Ripk2 ENSMUSG00000041135 299 0.843 - - - - - 0.843 receptor (TNFRSF)-interacting serine-threonine kinase 2 [Source:MGI Symbol;Acc:MGI:1891456]
55. Crhbp ENSMUSG00000021680 29 0.841 - - 0.841 - - - corticotropin releasing hormone binding protein [Source:MGI Symbol;Acc:MGI:88497]
56. Mettl21e ENSMUSG00000046828 7 0.838 - - 0.838 - - - methyltransferase like 21E [Source:MGI Symbol;Acc:MGI:2685837]
57. Syt12 ENSMUSG00000049303 17 0.837 - - 0.837 - - - synaptotagmin XII [Source:MGI Symbol;Acc:MGI:2159601]
58. Gm10775 ENSMUSG00000074847 121 0.835 - - - - - 0.835 predicted gene 10775 [Source:MGI Symbol;Acc:MGI:3642324]
59. Hmgb1-ps3 ENSMUSG00000081455 5 0.834 - - 0.834 - - - high mobility group box 1, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3768539]
60. Gm26631 ENSMUSG00000097445 22 0.834 - - 0.834 - - - predicted gene, 26631 [Source:MGI Symbol;Acc:MGI:5477125]
61. B3gnt9 ENSMUSG00000069920 24 0.833 - - 0.833 - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 [Source:MGI Symbol;Acc:MGI:2142841]
62. Rasal3 ENSMUSG00000052142 7 0.831 - - 0.831 - - - RAS protein activator like 3 [Source:MGI Symbol;Acc:MGI:2444128]
63. 2010015L04Rik 2010015L04Rik 37 0.826 - - 0.826 - - -
64. Lama3 ENSMUSG00000024421 55 0.824 - - 0.824 - - - laminin, alpha 3 [Source:MGI Symbol;Acc:MGI:99909]
65. Nod2 ENSMUSG00000055994 12 0.823 - - 0.823 - - - nucleotide-binding oligomerization domain containing 2 [Source:MGI Symbol;Acc:MGI:2429397]
66. 1700013G23Rik 1700013G23Rik 24 0.821 - - 0.821 - - -
67. Cox6b2 ENSMUSG00000051811 121 0.817 - - 0.817 - - - cytochrome c oxidase subunit 6B2 [Source:MGI Symbol;Acc:MGI:3044182]
68. Gm20663 ENSMUSG00000093378 49 0.813 - - 0.813 - - - predicted gene 20663 [Source:MGI Symbol;Acc:MGI:5313110]
69. C3ar1 ENSMUSG00000040552 119 0.812 - - 0.812 - - - complement component 3a receptor 1 [Source:MGI Symbol;Acc:MGI:1097680]
70. Lrrc73 ENSMUSG00000071073 18 0.811 - - 0.811 - - - leucine rich repeat containing 73 [Source:MGI Symbol;Acc:MGI:2684934]
71. 1810021B22Rik ENSMUSG00000087331 54 0.81 - - 0.810 - - - RIKEN cDNA 1810021B22 gene [Source:MGI Symbol;Acc:MGI:1916370]
72. Nr1h3 ENSMUSG00000002108 35 0.808 - - 0.808 - - - nuclear receptor subfamily 1, group H, member 3 [Source:MGI Symbol;Acc:MGI:1352462]
73. Gm11645 ENSMUSG00000080895 26 0.804 - - 0.804 - - - predicted gene 11645 [Source:MGI Symbol;Acc:MGI:3652133]
74. Slc16a9 ENSMUSG00000037762 83 0.803 - - 0.803 - - - solute carrier family 16 (monocarboxylic acid transporters), member 9 [Source:MGI Symbol;Acc:MGI:1914109]
75. Lgals4 ENSMUSG00000053964 72 0.803 - - 0.803 - - - lectin, galactose binding, soluble 4 [Source:MGI Symbol;Acc:MGI:107536]
76. Lrp11 ENSMUSG00000019796, ENSMUSG00000116377 144 0.802 - - - - - 0.802 low density lipoprotein receptor-related protein 11 [Source:MGI Symbol;Acc:MGI:2442989]
77. Gm27042 ENSMUSG00000097792 33 0.801 - - 0.801 - - - predicted gene, 27042 [Source:MGI Symbol;Acc:MGI:5504157]
78. 4930570G19Rik ENSMUSG00000085084 34 0.8 - - 0.800 - - - RIKEN cDNA 4930570G19 gene [Source:MGI Symbol;Acc:MGI:1923158]
79. Msc ENSMUSG00000025930 30 0.799 - - 0.799 - - - musculin [Source:MGI Symbol;Acc:MGI:1333884]
80. B330016D10Rik ENSMUSG00000048406 219 0.799 - - - - - 0.799 RIKEN cDNA B330016D10 gene [Source:MGI Symbol;Acc:MGI:2444063]
81. 2700016F22Rik ENSMUSG00000097731 59 0.798 - - 0.798 - - - RIKEN cDNA 2700016F22 gene [Source:MGI Symbol;Acc:MGI:1919807]
82. Tll1 ENSMUSG00000053626 142 0.793 - - 0.793 - - - tolloid-like [Source:MGI Symbol;Acc:MGI:106923]
83. Gm10182 ENSMUSG00000094627 24 0.793 - - - - 0.793 - predicted pseudogene 10182 [Source:MGI Symbol;Acc:MGI:3704327]
84. Pcsk2 ENSMUSG00000027419 185 0.792 - - - - - 0.792 proprotein convertase subtilisin/kexin type 2 [Source:MGI Symbol;Acc:MGI:97512]
85. Efcab12 ENSMUSG00000030321 63 0.792 - - 0.792 - - - EF-hand calcium binding domain 12 [Source:MGI Symbol;Acc:MGI:2681834]
86. Bcmo1 Bcmo1 44 0.786 - - 0.786 - - -
87. Gm12222 ENSMUSG00000060068 31 0.784 - - 0.784 - - - predicted gene 12222 [Source:MGI Symbol;Acc:MGI:3649523]
88. Cdh9 ENSMUSG00000025370 9 0.783 - - 0.783 - - - cadherin 9 [Source:MGI Symbol;Acc:MGI:107433]
89. Tmigd1 ENSMUSG00000020839 18 0.782 - - 0.782 - - - transmembrane and immunoglobulin domain containing 1 [Source:MGI Symbol;Acc:MGI:1913851]
90. 5730596B20Rik ENSMUSG00000056468 173 0.781 - - - - - 0.781 RIKEN cDNA 5730596B20 gene [Source:MGI Symbol;Acc:MGI:1924830]
91. Snph ENSMUSG00000027457 95 0.781 - - 0.781 - - - syntaphilin [Source:MGI Symbol;Acc:MGI:2139270]
92. Cd53 ENSMUSG00000040747 270 0.781 - - 0.781 - - - CD53 antigen [Source:MGI Symbol;Acc:MGI:88341]
93. Tc2n ENSMUSG00000021187 51 0.78 - - 0.780 - - - tandem C2 domains, nuclear [Source:MGI Symbol;Acc:MGI:1921663]
94. Col7a1 ENSMUSG00000025650 32 0.78 - - 0.780 - - - collagen, type VII, alpha 1 [Source:MGI Symbol;Acc:MGI:88462]
95. Gm13657 ENSMUSG00000086813 15 0.78 - - 0.780 - - - predicted gene 13657 [Source:MGI Symbol;Acc:MGI:3650031]
96. D130040H23Rik ENSMUSG00000079038 18 0.779 - - 0.779 - - - RIKEN cDNA D130040H23 gene [Source:MGI Symbol;Acc:MGI:2444324]
97. Ugt2b34 ENSMUSG00000029260 71 0.779 - - - - 0.779 - UDP glucuronosyltransferase 2 family, polypeptide B34 [Source:MGI Symbol;Acc:MGI:2140962]
98. Steap3 ENSMUSG00000026389 20 0.771 - - 0.771 - - - STEAP family member 3 [Source:MGI Symbol;Acc:MGI:1915678]
99. Prrx2 ENSMUSG00000039476 1259 0.77 - - - - - 0.770 paired related homeobox 2 [Source:MGI Symbol;Acc:MGI:98218]
100. 5330417C22Rik ENSMUSG00000040412 23 0.768 - - - - - 0.768 RIKEN cDNA 5330417C22 gene [Source:MGI Symbol;Acc:MGI:1923930]

There are 76 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA