Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Herc1

Gene Name Gene ID Reads Annotation
Herc1 ENSMUSG00000038664 1693 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 [Source:MGI Symbol;Acc:MGI:2384589]







Genes with expression patterns similar to Herc1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Herc1 ENSMUSG00000038664 1693 6 1.000 1.000 1.000 1.000 1.000 1.000 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 [Source:MGI Symbol;Acc:MGI:2384589]
2. Klhl25 ENSMUSG00000055652 725 1.785 0.890 - - - - 0.895 kelch-like 25 [Source:MGI Symbol;Acc:MGI:2668031]
3. Dtnb ENSMUSG00000071454 946 1.759 - 0.942 - - - 0.817 dystrobrevin, beta [Source:MGI Symbol;Acc:MGI:1203728]
4. Pqlc1 ENSMUSG00000034006 467 1.71 - 0.811 - - - 0.899 PQ loop repeat containing 1 [Source:MGI Symbol;Acc:MGI:1914193]
5. Abhd8 ENSMUSG00000007950 711 1.676 - 0.799 - - - 0.877 abhydrolase domain containing 8 [Source:MGI Symbol;Acc:MGI:1918946]
6. Snx3 ENSMUSG00000019804 8732 1.674 0.834 - - - - 0.840 sorting nexin 3 [Source:MGI Symbol;Acc:MGI:1860188]
7. Plcg1 ENSMUSG00000016933 2046 1.674 - 0.899 - - - 0.775 phospholipase C, gamma 1 [Source:MGI Symbol;Acc:MGI:97615]
8. Glt8d1 ENSMUSG00000021916 1457 1.667 0.904 0.763 - - - - glycosyltransferase 8 domain containing 1 [Source:MGI Symbol;Acc:MGI:1923735]
9. 2610507B11Rik ENSMUSG00000010277 2317 1.659 0.878 - - - - 0.781 RIKEN cDNA 2610507B11 gene [Source:MGI Symbol;Acc:MGI:1919753]
10. Mt1 ENSMUSG00000031765 1970 1.659 0.900 - - - - 0.759 metallothionein 1 [Source:MGI Symbol;Acc:MGI:97171]
11. Xpo5 ENSMUSG00000067150 682 1.656 - 0.788 - - - 0.868 exportin 5 [Source:MGI Symbol;Acc:MGI:1913789]
12. Nup214 ENSMUSG00000001855 1695 1.632 - 0.765 - - - 0.867 nucleoporin 214 [Source:MGI Symbol;Acc:MGI:1095411]
13. Tmem183a ENSMUSG00000042305 2170 1.628 0.912 - - - - 0.716 transmembrane protein 183A [Source:MGI Symbol;Acc:MGI:1914729]
14. Fam105b Fam105b 1241 1.624 - 0.742 - - - 0.882
15. Mrpl44 ENSMUSG00000026248 1593 1.611 0.904 - - - - 0.707 mitochondrial ribosomal protein L44 [Source:MGI Symbol;Acc:MGI:1916413]
16. Ppp3r1 ENSMUSG00000033953 1296 1.601 - 0.797 - - - 0.804 protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) [Source:MGI Symbol;Acc:MGI:107172]
17. Setd5 ENSMUSG00000034269 3438 1.583 0.813 0.770 - - - - SET domain containing 5 [Source:MGI Symbol;Acc:MGI:1920145]
18. Mettl6 ENSMUSG00000021891 1308 1.57 - 0.777 - - - 0.793 methyltransferase like 6 [Source:MGI Symbol;Acc:MGI:1914261]
19. Ecd ENSMUSG00000021810 4388 1.555 0.851 - - - - 0.704 ecdysoneless cell cycle regulator [Source:MGI Symbol;Acc:MGI:1917851]
20. Jarid2 ENSMUSG00000038518 15010 1.438 0.708 0.730 - - - - jumonji, AT rich interactive domain 2 [Source:MGI Symbol;Acc:MGI:104813]
21. Gphn ENSMUSG00000047454 499 0.94 - - - - - 0.940 gephyrin [Source:MGI Symbol;Acc:MGI:109602]
22. Ppif ENSMUSG00000021868 4267 0.934 0.934 - - - - - peptidylprolyl isomerase F (cyclophilin F) [Source:MGI Symbol;Acc:MGI:2145814]
23. Slc15a4 ENSMUSG00000029416 453 0.934 - 0.934 - - - - solute carrier family 15, member 4 [Source:MGI Symbol;Acc:MGI:2140796]
24. Ccnjl ENSMUSG00000044707 2735 0.932 0.932 - - - - - cyclin J-like [Source:MGI Symbol;Acc:MGI:2685723]
25. Runx2 ENSMUSG00000039153 319 0.931 - 0.931 - - - - runt related transcription factor 2 [Source:MGI Symbol;Acc:MGI:99829]
26. Csf1r ENSMUSG00000024621 344 0.931 - - - - - 0.931 colony stimulating factor 1 receptor [Source:MGI Symbol;Acc:MGI:1339758]
27. Csf1 ENSMUSG00000014599 504 0.931 0.931 - - - - - colony stimulating factor 1 (macrophage) [Source:MGI Symbol;Acc:MGI:1339753]
28. Tlk2 ENSMUSG00000020694 2900 0.931 0.931 - - - - - tousled-like kinase 2 (Arabidopsis) [Source:MGI Symbol;Acc:MGI:1346023]
29. Zbed6 ENSMUSG00000102049 568 0.929 0.929 - - - - - zinc finger, BED type containing 6 [Source:MGI Symbol;Acc:MGI:3828086]
30. Insl6 ENSMUSG00000050957 119 0.929 - - - - - 0.929 insulin-like 6 [Source:MGI Symbol;Acc:MGI:1351595]
31. Parp16 ENSMUSG00000032392 195 0.928 - - - - - 0.928 poly (ADP-ribose) polymerase family, member 16 [Source:MGI Symbol;Acc:MGI:2446133]
32. Fastkd2 ENSMUSG00000025962 688 0.928 - - - - - 0.928 FAST kinase domains 2 [Source:MGI Symbol;Acc:MGI:1922869]
33. Gm13613 ENSMUSG00000086819 36 0.928 - - - - - 0.928 predicted gene 13613 [Source:MGI Symbol;Acc:MGI:3650687]
34. A830005F24Rik ENSMUSG00000053181 54 0.928 - - - - - 0.928 RIKEN cDNA A830005F24 gene [Source:MGI Symbol;Acc:MGI:3045249]
35. Ppl ENSMUSG00000039457 107 0.927 - - - - - 0.927 periplakin [Source:MGI Symbol;Acc:MGI:1194898]
36. Tufm ENSMUSG00000073838 265 0.927 - - - - - 0.927 Tu translation elongation factor, mitochondrial [Source:MGI Symbol;Acc:MGI:1923686]
37. Qsox2 ENSMUSG00000036327 342 0.927 - - - - - 0.927 quiescin Q6 sulfhydryl oxidase 2 [Source:MGI Symbol;Acc:MGI:2387194]
38. D130062J21Rik D130062J21Rik 693 0.926 - - - - - 0.926
39. Gm12024 ENSMUSG00000081101 53 0.926 - - - - - 0.926 predicted gene 12024 [Source:MGI Symbol;Acc:MGI:3650980]
40. BC016423 BC016423 753 0.926 - 0.926 - - - -
41. Ascl2 ENSMUSG00000009248 66 0.926 - - - - - 0.926 achaete-scute family bHLH transcription factor 2 [Source:MGI Symbol;Acc:MGI:96920]
42. Ibtk ENSMUSG00000035941 5221 0.926 0.926 - - - - - inhibitor of Bruton agammaglobulinemia tyrosine kinase [Source:MGI Symbol;Acc:MGI:1918677]
43. Gm9083 ENSMUSG00000083033 141 0.926 - - - - - 0.926 predicted gene 9083 [Source:MGI Symbol;Acc:MGI:3644452]
44. 4930447F04Rik ENSMUSG00000031182 31 0.925 - - - - - 0.925 RIKEN cDNA 4930447F04 gene [Source:MGI Symbol;Acc:MGI:1922112]
45. Clec11a ENSMUSG00000004473 282 0.925 - - - - - 0.925 C-type lectin domain family 11, member a [Source:MGI Symbol;Acc:MGI:1298219]
46. Pkib ENSMUSG00000019876 677 0.925 - - - - - 0.925 protein kinase inhibitor beta, cAMP dependent, testis specific [Source:MGI Symbol;Acc:MGI:101937]
47. Gm5250 ENSMUSG00000069620 31 0.925 - - - - - 0.925 predicted gene 5250 [Source:MGI Symbol;Acc:MGI:3647667]
48. 1810019D21Rik ENSMUSG00000086390 50 0.925 - - - - - 0.925 RIKEN cDNA 1810019D21 gene [Source:MGI Symbol;Acc:MGI:1917021]
49. Gm15249 Gm15249 167 0.925 - - - - - 0.925
50. Ophn1 ENSMUSG00000031214 1005 0.925 - - - - - 0.925 oligophrenin 1 [Source:MGI Symbol;Acc:MGI:2151070]
51. Gm13362 ENSMUSG00000086418 31 0.925 - - - - - 0.925 predicted gene 13362 [Source:MGI Symbol;Acc:MGI:3652150]
52. Esco1 ENSMUSG00000024293 313 0.925 - - - - - 0.925 establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:MGI Symbol;Acc:MGI:1925055]
53. Gm23458 ENSMUSG00000065191 51 0.925 - - - - - 0.925 predicted gene, 23458 [Source:MGI Symbol;Acc:MGI:5453235]
54. Gm26793 ENSMUSG00000096999 40 0.924 - - - - - 0.924 predicted gene, 26793 [Source:MGI Symbol;Acc:MGI:5477287]
55. Gm2381 ENSMUSG00000092225 56 0.924 - - - - - 0.924 predicted gene 2381 [Source:MGI Symbol;Acc:MGI:3780549]
56. Panx2 ENSMUSG00000058441 42 0.923 - - - - - 0.923 pannexin 2 [Source:MGI Symbol;Acc:MGI:1890615]
57. Snta1 ENSMUSG00000027488 128 0.923 - - - - - 0.923 syntrophin, acidic 1 [Source:MGI Symbol;Acc:MGI:101772]
58. Paqr8 ENSMUSG00000025931 160 0.923 - - - - - 0.923 progestin and adipoQ receptor family member VIII [Source:MGI Symbol;Acc:MGI:1921479]
59. Gm16433 ENSMUSG00000043024 424 0.923 - - - - - 0.923 predicted gene 16433 [Source:MGI Symbol;Acc:MGI:3645626]
60. Rpp14 ENSMUSG00000023156 1874 0.922 0.922 - - - - - ribonuclease P 14 subunit [Source:MGI Symbol;Acc:MGI:1914303]
61. 1600002H07Rik 740 0.922 - - - - - 0.922 RIKEN cDNA 1600002H07 gene, transcript variant X2
62. Slc7a11 ENSMUSG00000027737 244 0.922 - - - - - 0.922 solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 [Source:MGI Symbol;Acc:MGI:1347355]
63. Dmrtb1 ENSMUSG00000028610 67 0.921 - - - - - 0.921 DMRT-like family B with proline-rich C-terminal, 1 [Source:MGI Symbol;Acc:MGI:1927125]
64. Snord15b ENSMUSG00000064966 96 0.921 - - - - - 0.921 small nucleolar RNA, C/D box 14B [Source:MGI Symbol;Acc:MGI:3779515]
65. Rnf121 ENSMUSG00000070426 743 0.921 - - - - - 0.921 ring finger protein 121 [Source:MGI Symbol;Acc:MGI:1922462]
66. Gm13793 ENSMUSG00000087069 2307 0.92 0.920 - - - - - predicted gene 13793 [Source:MGI Symbol;Acc:MGI:3652243]
67. Cldn23 ENSMUSG00000055976 75 0.919 - - - - - 0.919 claudin 23 [Source:MGI Symbol;Acc:MGI:1919158]
68. Epb4.1l2 Epb4.1l2 1613 0.919 - 0.919 - - - -
69. Tmem214 ENSMUSG00000038828 4592 0.918 0.918 - - - - - transmembrane protein 214 [Source:MGI Symbol;Acc:MGI:1916046]
70. Diap2 Diap2 297 0.918 - - - - - 0.918
71. Ncoa6 ENSMUSG00000038369 2997 0.918 0.918 - - - - - nuclear receptor coactivator 6 [Source:MGI Symbol;Acc:MGI:1929915]
72. 1300002K09Rik 1300002K09Rik 75 0.917 - - - - - 0.917
73. Anapc1 ENSMUSG00000014355 5670 0.916 0.916 - - - - - anaphase promoting complex subunit 1 [Source:MGI Symbol;Acc:MGI:103097]
74. Tfeb ENSMUSG00000023990 568 0.916 - - - - - 0.916 transcription factor EB [Source:MGI Symbol;Acc:MGI:103270]
75. Akap11 ENSMUSG00000022016 2542 0.916 0.916 - - - - - A kinase (PRKA) anchor protein 11 [Source:MGI Symbol;Acc:MGI:2684060]
76. Nphp4 ENSMUSG00000039577 216 0.915 - - - - - 0.915 nephronophthisis 4 (juvenile) homolog (human) [Source:MGI Symbol;Acc:MGI:2384210]
77. Nid1 ENSMUSG00000005397 2804 0.915 0.915 - - - - - nidogen 1 [Source:MGI Symbol;Acc:MGI:97342]
78. Gm14966 ENSMUSG00000079467, ENSMUSG00000107250 141 0.915 - - - - - 0.915 predicted gene 14966 [Source:MGI Symbol;Acc:MGI:3705223]
79. Acsl5 ENSMUSG00000024981 381 0.914 - - - - - 0.914 acyl-CoA synthetase long-chain family member 5 [Source:MGI Symbol;Acc:MGI:1919129]
80. Mif4gd ENSMUSG00000020743 422 0.914 - - - - - 0.914 MIF4G domain containing [Source:MGI Symbol;Acc:MGI:1916924]
81. Lama5 ENSMUSG00000015647 351 0.914 - - - - - 0.914 laminin, alpha 5 [Source:MGI Symbol;Acc:MGI:105382]
82. 2900076A07Rik ENSMUSG00000097277 202 0.914 - - - - - 0.914 RIKEN cDNA 2900076A07 gene [Source:MGI Symbol;Acc:MGI:1920242]
83. Pex12 ENSMUSG00000018733 304 0.914 - - - - - 0.914 peroxisomal biogenesis factor 12 [Source:MGI Symbol;Acc:MGI:2144177]
84. Tut1 ENSMUSG00000071645 656 0.914 - 0.914 - - - - terminal uridylyl transferase 1, U6 snRNA-specific [Source:MGI Symbol;Acc:MGI:1917294]
85. Alyref2 ENSMUSG00000060244 351 0.913 - - - - - 0.913 Aly/REF export factor 2 [Source:MGI Symbol;Acc:MGI:1913144]
86. Dyrk2 ENSMUSG00000028630 251 0.913 - - - - - 0.913 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:MGI Symbol;Acc:MGI:1330301]
87. Fahd2a ENSMUSG00000027371 222 0.913 - - - - - 0.913 fumarylacetoacetate hydrolase domain containing 2A [Source:MGI Symbol;Acc:MGI:1915376]
88. Hmox1 ENSMUSG00000005413 393 0.912 - - - - - 0.912 heme oxygenase 1 [Source:MGI Symbol;Acc:MGI:96163]
89. Tkt ENSMUSG00000021957 2636 0.912 0.912 - - - - - transketolase [Source:MGI Symbol;Acc:MGI:105992]
90. Rpl9 ENSMUSG00000047215 1086 0.912 - - - - - 0.912 ribosomal protein L9 [Source:MGI Symbol;Acc:MGI:1298373]
91. Kdm1a ENSMUSG00000036940 2286 0.912 0.912 - - - - - lysine (K)-specific demethylase 1A [Source:MGI Symbol;Acc:MGI:1196256]
92. Lypd6 ENSMUSG00000050447 283 0.912 - - - - - 0.912 LY6/PLAUR domain containing 6 [Source:MGI Symbol;Acc:MGI:2443848]
93. Pard6a ENSMUSG00000005699 236 0.911 - - - - - 0.911 par-6 family cell polarity regulator alpha [Source:MGI Symbol;Acc:MGI:1927223]
94. Gltscr2 5401 0.911 0.911 - - - - - glioma tumor suppressor candidate region gene 2
95. Cdk10 ENSMUSG00000033862 738 0.911 - - - - - 0.911 cyclin-dependent kinase 10 [Source:MGI Symbol;Acc:MGI:2448549]
96. Gas5 ENSMUSG00000053332 2096 0.911 0.911 - - - - - growth arrest specific 5 [Source:MGI Symbol;Acc:MGI:95659]
97. Lrif1 ENSMUSG00000056260 480 0.911 - - - - - 0.911 ligand dependent nuclear receptor interacting factor 1 [Source:MGI Symbol;Acc:MGI:2445214]
98. Dusp16 ENSMUSG00000030203 951 0.911 - - - - - 0.911 dual specificity phosphatase 16 [Source:MGI Symbol;Acc:MGI:1917936]
99. Epdr1 ENSMUSG00000002808 561 0.91 - - - - - 0.910 ependymin related protein 1 (zebrafish) [Source:MGI Symbol;Acc:MGI:2145369]
100. Atp6v1a ENSMUSG00000052459 6222 0.91 0.910 - - - - - ATPase, H+ transporting, lysosomal V1 subunit A [Source:MGI Symbol;Acc:MGI:1201780]

There are 722 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA