Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Hddc3

Gene Name Gene ID Reads Annotation
Hddc3 ENSMUSG00000030532 213 HD domain containing 3 [Source:MGI Symbol;Acc:MGI:1915945]







Genes with expression patterns similar to Hddc3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hddc3 ENSMUSG00000030532 213 6 1.000 1.000 1.000 1.000 1.000 1.000 HD domain containing 3 [Source:MGI Symbol;Acc:MGI:1915945]
2. C030013C21Rik ENSMUSG00000085078 24 1.614 - 0.729 - 0.885 - - RIKEN cDNA C030013C21 gene [Source:MGI Symbol;Acc:MGI:1924667]
3. AA474331 AA474331 111 1.43 - 0.717 0.713 - - -
4. Stbd1 ENSMUSG00000047963 377 0.996 - - - - - 0.996 starch binding domain 1 [Source:MGI Symbol;Acc:MGI:1261768]
5. Phf19 ENSMUSG00000026873 83 0.994 - - - - - 0.994 PHD finger protein 19 [Source:MGI Symbol;Acc:MGI:1921266]
6. Sh3rf2 ENSMUSG00000057719 60 0.994 - - - - - 0.994 SH3 domain containing ring finger 2 [Source:MGI Symbol;Acc:MGI:2444628]
7. Gm24451 ENSMUSG00000065287 57 0.994 - - - - - 0.994 predicted gene, 24451 [Source:MGI Symbol;Acc:MGI:5454228]
8. Gm14286 ENSMUSG00000087445 166 0.993 - - - - - 0.993 predicted gene 14286 [Source:MGI Symbol;Acc:MGI:3650190]
9. Il17d ENSMUSG00000050222 119 0.993 - - - - - 0.993 interleukin 17D [Source:MGI Symbol;Acc:MGI:2446510]
10. Gm10307 ENSMUSG00000101093 159 0.993 - - - - - 0.993 predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
11. Hes3 ENSMUSG00000028946 73 0.992 - - - - - 0.992 hes family bHLH transcription factor 3 [Source:MGI Symbol;Acc:MGI:104877]
12. Gm13910 ENSMUSG00000063684 126 0.992 - - - - - 0.992 predicted gene 13910 [Source:MGI Symbol;Acc:MGI:3651143]
13. Fam131a ENSMUSG00000050821 113 0.992 - - - - - 0.992 family with sequence similarity 131, member A [Source:MGI Symbol;Acc:MGI:1925658]
14. Htr1b ENSMUSG00000049511 77 0.991 - - - - - 0.991 5-hydroxytryptamine (serotonin) receptor 1B [Source:MGI Symbol;Acc:MGI:96274]
15. Gm13476 Gm13476 165 0.989 - - - - - 0.989
16. Ufsp1 ENSMUSG00000051502 251 0.989 - - - - - 0.989 UFM1-specific peptidase 1 [Source:MGI Symbol;Acc:MGI:1917490]
17. Paxbp1 ENSMUSG00000022974 322 0.989 - - - - - 0.989 PAX3 and PAX7 binding protein 1 [Source:MGI Symbol;Acc:MGI:1914617]
18. Ostm1 ENSMUSG00000038280 208 0.989 - - - - - 0.989 osteopetrosis associated transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:2655574]
19. Amd1 ENSMUSG00000075232 1041 0.987 - - - - - 0.987 S-adenosylmethionine decarboxylase 1 [Source:MGI Symbol;Acc:MGI:88004]
20. Cish ENSMUSG00000032578 239 0.987 - - - - - 0.987 cytokine inducible SH2-containing protein [Source:MGI Symbol;Acc:MGI:103159]
21. Lgr5 ENSMUSG00000020140 516 0.986 - - - - - 0.986 leucine rich repeat containing G protein coupled receptor 5 [Source:MGI Symbol;Acc:MGI:1341817]
22. Bcr ENSMUSG00000009681 588 0.985 - - - - - 0.985 breakpoint cluster region [Source:MGI Symbol;Acc:MGI:88141]
23. Ftx ENSMUSG00000086370 285 0.985 - - - - - 0.985 Ftx transcript, Xist regulator (non-protein coding) [Source:MGI Symbol;Acc:MGI:1926128]
24. Acsl6 ENSMUSG00000020333 249 0.983 - - - - - 0.983 acyl-CoA synthetase long-chain family member 6 [Source:MGI Symbol;Acc:MGI:894291]
25. Alkbh4 ENSMUSG00000039754 367 0.983 - - - - - 0.983 alkB homolog 4, lysine demethylase [Source:MGI Symbol;Acc:MGI:1919291]
26. 2310015A10Rik ENSMUSG00000097729 199 0.982 - - - - - 0.982 RIKEN cDNA 2310015A10 gene [Source:MGI Symbol;Acc:MGI:1916798]
27. 9130023H24Rik ENSMUSG00000062944 258 0.982 - - - - - 0.982 RIKEN cDNA 9130023H24 gene [Source:MGI Symbol;Acc:MGI:2442738]
28. Hbb-bs ENSMUSG00000052305 2551 0.981 - - - - - 0.981 hemoglobin, beta adult s chain [Source:MGI Symbol;Acc:MGI:5474852]
29. Zzef1 ENSMUSG00000055670 953 0.98 - - - - - 0.980 zinc finger, ZZ-type with EF hand domain 1 [Source:MGI Symbol;Acc:MGI:2444286]
30. Ttc7 ENSMUSG00000036918 154 0.98 - - - - - 0.980 tetratricopeptide repeat domain 7 [Source:MGI Symbol;Acc:MGI:1920999]
31. Atp6ap1 ENSMUSG00000019087 614 0.98 - - - - - 0.980 ATPase, H+ transporting, lysosomal accessory protein 1 [Source:MGI Symbol;Acc:MGI:109629]
32. Pdp2 ENSMUSG00000048371 637 0.98 - - - - - 0.980 pyruvate dehyrogenase phosphatase catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:1918878]
33. Pfkfb2 ENSMUSG00000026409 480 0.979 - - - - - 0.979 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:MGI Symbol;Acc:MGI:107815]
34. Dpysl4 ENSMUSG00000025478, ENSMUSG00000111393 1028 0.979 - - - - - 0.979 dihydropyrimidinase-like 4 [Source:MGI Symbol;Acc:MGI:1349764]
35. Pcdha2 ENSMUSG00000104148 246 0.978 - - - - - 0.978 protocadherin alpha 2 [Source:MGI Symbol;Acc:MGI:2681880]
36. Dtd1 ENSMUSG00000027430 447 0.978 - - - - - 0.978 D-tyrosyl-tRNA deacylase 1 [Source:MGI Symbol;Acc:MGI:1913294]
37. Gm10040 ENSMUSG00000058360 476 0.978 - - - - - 0.978 predicted gene 10040 [Source:MGI Symbol;Acc:MGI:3708676]
38. Ppt2 ENSMUSG00000015474 321 0.978 - - - - - 0.978 palmitoyl-protein thioesterase 2 [Source:MGI Symbol;Acc:MGI:1860075]
39. Dusp2 ENSMUSG00000027368 534 0.977 - - - - - 0.977 dual specificity phosphatase 2 [Source:MGI Symbol;Acc:MGI:101911]
40. Lhpp ENSMUSG00000030946 365 0.976 - - - - - 0.976 phospholysine phosphohistidine inorganic pyrophosphate phosphatase [Source:MGI Symbol;Acc:MGI:1923679]
41. Dfna5 492 0.976 - - - - - 0.976 deafness, autosomal dominant 5 (human), transcript variant X3
42. Zfyve19 ENSMUSG00000068580 337 0.975 - - - - - 0.975 zinc finger, FYVE domain containing 19 [Source:MGI Symbol;Acc:MGI:1919258]
43. Fancl ENSMUSG00000004018 569 0.974 - - - - - 0.974 Fanconi anemia, complementation group L [Source:MGI Symbol;Acc:MGI:1914280]
44. Phf12 ENSMUSG00000037791 554 0.974 - - - - - 0.974 PHD finger protein 12 [Source:MGI Symbol;Acc:MGI:1924057]
45. Mcm8 ENSMUSG00000027353 1598 0.974 - - - - - 0.974 minichromosome maintenance 8 homologous recombination repair factor [Source:MGI Symbol;Acc:MGI:1913884]
46. 5930412G12Rik ENSMUSG00000072591 503 0.974 - - - - - 0.974 RIKEN cDNA 5930412G12 gene [Source:MGI Symbol;Acc:MGI:2442398]
47. Blmh ENSMUSG00000020840 2762 0.973 - - - - - 0.973 bleomycin hydrolase [Source:MGI Symbol;Acc:MGI:1345186]
48. Gpr108 ENSMUSG00000005823 539 0.972 - - - - - 0.972 G protein-coupled receptor 108 [Source:MGI Symbol;Acc:MGI:1925558]
49. Taz ENSMUSG00000009995 1408 0.972 - - - - - 0.972 tafazzin [Source:MGI Symbol;Acc:MGI:109626]
50. Trdmt1 ENSMUSG00000026723 391 0.972 - - - - - 0.972 tRNA aspartic acid methyltransferase 1 [Source:MGI Symbol;Acc:MGI:1274787]
51. Ctsc ENSMUSG00000030560 650 0.971 - - - - - 0.971 cathepsin C [Source:MGI Symbol;Acc:MGI:109553]
52. Rad51ap1 ENSMUSG00000030346 1698 0.971 - - - - - 0.971 RAD51 associated protein 1 [Source:MGI Symbol;Acc:MGI:1098224]
53. Wipi1 ENSMUSG00000041895 3789 0.97 - - - - - 0.970 WD repeat domain, phosphoinositide interacting 1 [Source:MGI Symbol;Acc:MGI:1261864]
54. Homer3 ENSMUSG00000003573 2190 0.969 - - - - - 0.969 homer scaffolding protein 3 [Source:MGI Symbol;Acc:MGI:1347359]
55. BC026585 1005 0.968 - - - - - 0.968 cDNA sequence BC026585, transcript variant X1
56. Zbtb6 ENSMUSG00000066798 698 0.968 - - - - - 0.968 zinc finger and BTB domain containing 6 [Source:MGI Symbol;Acc:MGI:2442998]
57. Gm15545 ENSMUSG00000087138 252 0.968 - - - - - 0.968 predicted gene 15545 [Source:MGI Symbol;Acc:MGI:3782994]
58. Mbd1 ENSMUSG00000024561 619 0.968 - - - - - 0.968 methyl-CpG binding domain protein 1 [Source:MGI Symbol;Acc:MGI:1333811]
59. Gtf2f2 ENSMUSG00000067995 1487 0.968 - - - - - 0.968 general transcription factor IIF, polypeptide 2 [Source:MGI Symbol;Acc:MGI:1915955]
60. Vimp 1184 0.968 - - - - - 0.968 VCP-interacting membrane protein
61. Ctla2a ENSMUSG00000044258 507 0.967 - - - - - 0.967 cytotoxic T lymphocyte-associated protein 2 alpha [Source:MGI Symbol;Acc:MGI:88554]
62. Pik3c2b ENSMUSG00000026447 424 0.966 - - - - - 0.966 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:MGI Symbol;Acc:MGI:2685045]
63. 1700052N19Rik 1700052N19Rik 913 0.965 - - - - - 0.965
64. Prkaa1 ENSMUSG00000050697 591 0.964 - - - - - 0.964 protein kinase, AMP-activated, alpha 1 catalytic subunit [Source:MGI Symbol;Acc:MGI:2145955]
65. Ccdc91 ENSMUSG00000030301 664 0.964 - - - - - 0.964 coiled-coil domain containing 91 [Source:MGI Symbol;Acc:MGI:1914265]
66. Chst10 ENSMUSG00000026080 667 0.963 - - - - - 0.963 carbohydrate sulfotransferase 10 [Source:MGI Symbol;Acc:MGI:2138283]
67. Slc25a53 ENSMUSG00000044348 516 0.963 - - - - - 0.963 solute carrier family 25, member 53 [Source:MGI Symbol;Acc:MGI:1914312]
68. Unc45a ENSMUSG00000030533 852 0.962 - - - - - 0.962 unc-45 myosin chaperone A [Source:MGI Symbol;Acc:MGI:2142246]
69. Trak1 ENSMUSG00000032536 705 0.962 - - - - - 0.962 trafficking protein, kinesin binding 1 [Source:MGI Symbol;Acc:MGI:1914345]
70. Ppcs ENSMUSG00000028636 669 0.962 - - - - - 0.962 phosphopantothenoylcysteine synthetase [Source:MGI Symbol;Acc:MGI:1915237]
71. Aspscr1 ENSMUSG00000025142 694 0.961 - - - - - 0.961 alveolar soft part sarcoma chromosome region, candidate 1 (human) [Source:MGI Symbol;Acc:MGI:1916188]
72. Coq3 ENSMUSG00000028247 463 0.959 - - - - - 0.959 coenzyme Q3 methyltransferase [Source:MGI Symbol;Acc:MGI:101813]
73. Gm21833 ENSMUSG00000094030 652 0.958 - - - - - 0.958 predicted gene, 21833 [Source:MGI Symbol;Acc:MGI:5433997]
74. Recql5 ENSMUSG00000020752 591 0.957 - - - - - 0.957 RecQ protein-like 5 [Source:MGI Symbol;Acc:MGI:2156841]
75. Pdss2 ENSMUSG00000038240 749 0.957 - - - - - 0.957 prenyl (solanesyl) diphosphate synthase, subunit 2 [Source:MGI Symbol;Acc:MGI:1918615]
76. Fut10 ENSMUSG00000046152 702 0.956 - - - - - 0.956 fucosyltransferase 10 [Source:MGI Symbol;Acc:MGI:2384748]
77. Adcy1 ENSMUSG00000020431 381 0.955 - - - - - 0.955 adenylate cyclase 1 [Source:MGI Symbol;Acc:MGI:99677]
78. Stk25 ENSMUSG00000026277 2131 0.955 - - - - - 0.955 serine/threonine kinase 25 (yeast) [Source:MGI Symbol;Acc:MGI:1891699]
79. Usp50 ENSMUSG00000027364 304 0.955 - - - - - 0.955 ubiquitin specific peptidase 50 [Source:MGI Symbol;Acc:MGI:1922333]
80. Rrp8 ENSMUSG00000030888 887 0.955 - - - - - 0.955 ribosomal RNA processing 8, methyltransferase, homolog (yeast) [Source:MGI Symbol;Acc:MGI:1914251]
81. Atp8a1 ENSMUSG00000037685 1155 0.954 - - - - - 0.954 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 [Source:MGI Symbol;Acc:MGI:1330848]
82. Rufy2 ENSMUSG00000020070 1150 0.954 - - - - - 0.954 RUN and FYVE domain-containing 2 [Source:MGI Symbol;Acc:MGI:1917682]
83. Ndufb11 ENSMUSG00000031059 4781 0.954 - - - - - 0.954 NADH:ubiquinone oxidoreductase subunit B11 [Source:MGI Symbol;Acc:MGI:1349919]
84. Asb13 ENSMUSG00000033781 402 0.954 - - - - - 0.954 ankyrin repeat and SOCS box-containing 13 [Source:MGI Symbol;Acc:MGI:2145525]
85. Asah1 ENSMUSG00000031591 856 0.952 - - - - - 0.952 N-acylsphingosine amidohydrolase 1 [Source:MGI Symbol;Acc:MGI:1277124]
86. Vps45 ENSMUSG00000015747 406 0.952 - - - - - 0.952 vacuolar protein sorting 45 [Source:MGI Symbol;Acc:MGI:891965]
87. Zfp259 Zfp259 2259 0.951 - - - - - 0.951
88. Cep128 ENSMUSG00000061533 494 0.951 - - - - - 0.951 centrosomal protein 128 [Source:MGI Symbol;Acc:MGI:1922466]
89. Zfp236 ENSMUSG00000041258 968 0.95 - - - - - 0.950 zinc finger protein 236 [Source:MGI Symbol;Acc:MGI:1926950]
90. Rhbdf1 ENSMUSG00000020282 1113 0.95 - - - - - 0.950 rhomboid 5 homolog 1 [Source:MGI Symbol;Acc:MGI:104328]
91. Gpsm1 ENSMUSG00000026930 656 0.95 - - - - - 0.950 G-protein signalling modulator 1 (AGS3-like, C. elegans) [Source:MGI Symbol;Acc:MGI:1915089]
92. Ninl ENSMUSG00000068115 1268 0.949 - - - - - 0.949 ninein-like [Source:MGI Symbol;Acc:MGI:1925427]
93. Crcp ENSMUSG00000025532 699 0.949 - - - - - 0.949 calcitonin gene-related peptide-receptor component protein [Source:MGI Symbol;Acc:MGI:1100818]
94. Tnrc18 ENSMUSG00000039477 1051 0.949 - - - - - 0.949 trinucleotide repeat containing 18 [Source:MGI Symbol;Acc:MGI:3648294]
95. Slc7a6 ENSMUSG00000031904 1103 0.947 - - - - - 0.947 solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 [Source:MGI Symbol;Acc:MGI:2142598]
96. Mrpl37 ENSMUSG00000028622 2555 0.947 - - - - - 0.947 mitochondrial ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1926268]
97. Slc30a5 ENSMUSG00000021629 839 0.945 - - - - - 0.945 solute carrier family 30 (zinc transporter), member 5 [Source:MGI Symbol;Acc:MGI:1916298]
98. Tbc1d20 ENSMUSG00000027465 1026 0.945 - - - - - 0.945 TBC1 domain family, member 20 [Source:MGI Symbol;Acc:MGI:1914481]
99. Acp2 ENSMUSG00000002103 1293 0.945 - - - - - 0.945 acid phosphatase 2, lysosomal [Source:MGI Symbol;Acc:MGI:87882]
100. St18 ENSMUSG00000033740 408 0.944 - - - - - 0.944 suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]

There are 512 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA