Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HSCB

Gene Name Gene ID Reads Annotation
HSCB ENSGALG00000005706 12953 HscB mitochondrial iron-sulfur cluster cochaperone [Source:HGNC Symbol;Acc:HGNC:28913]











Genes with expression patterns similar to HSCB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HSCB ENSGALG00000005706 12953 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 HscB mitochondrial iron-sulfur cluster cochaperone [Source:HGNC Symbol;Acc:HGNC:28913]
2. DAD1 ENSGALG00000035626 32604 1.617 - - - - - - 0.729 0.888 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
3. ERLIN2 ENSGALG00000003092 18251 1.568 - - - - - - - 0.858 - 0.710 ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
4. ARHGAP19 ENSGALG00000007609 3655 1.551 - - - - - - 0.814 0.737 - - Rho GTPase activating protein 19 [Source:NCBI gene;Acc:423846]
5. PRPF6 ENSGALG00000006001 8572 1.55 - - - - - - 0.783 0.767 - - pre-mRNA processing factor 6 [Source:HGNC Symbol;Acc:HGNC:15860]
6. APRT ENSGALG00000031000 7535 1.55 - - - - - - 0.802 0.748 - - adenine phosphoribosyltransferase [Source:NCBI gene;Acc:100857155]
7. TRAPPC2L ENSGALG00000006250 21772 1.546 - - - - - - 0.759 0.787 - - trafficking protein particle complex 2 like [Source:HGNC Symbol;Acc:HGNC:30887]
8. SRSF1 ENSGALG00000005525 4376 1.532 - - - - - - 0.774 0.758 - - serine and arginine rich splicing factor 1 [Source:NCBI gene;Acc:772264]
9. WDR3 ENSGALG00000014791 5856 1.517 - - - - - - 0.739 0.778 - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]
10. R3HDM1 ENSGALG00000012246 6580 1.491 - - - - - - 0.701 0.790 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
11. CEP76 ENSGALG00000013858 1809 1.484 - - - - - - 0.777 0.707 - - centrosomal protein 76
12. KLHL21 ENSGALG00000035211 6145 1.483 - - - - - - 0.704 0.779 - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
13. SETD3 ENSGALG00000034802 4125 1.459 - - - - - - 0.708 0.751 - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
14. HSF2 ENSGALG00000038420 5259 1.456 - - - - - - 0.748 0.708 - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
15. ASNS ENSGALG00000009748 11822 1.45 - - - - - - - 0.736 - 0.714 asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
16. RAB40C ENSGALG00000030481 3095 1.415 - - - - - - 0.702 0.713 - - RAB40C, member RAS oncogene family [Source:NCBI gene;Acc:769960]
17. PSMB3 ENSGALG00000001597 22588 0.891 - - - - - - - 0.891 - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
18. PTPMT1 ENSGALG00000008091 6160 0.889 - - - - - - - 0.889 - - protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:423181]
19. C1H11ORF73 C1H11ORF73 10071 0.877 - - - - - - - 0.877 - -
20. BPNT1 ENSGALG00000009576 7445 0.874 - - - - - - - 0.874 - - 3'(2'), 5'-bisphosphate nucleotidase 1 [Source:NCBI gene;Acc:421347]
21. DCPS ENSGALG00000031143 10191 0.873 - - - - - - - 0.873 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
22. PSMD10 ENSGALG00000008287 11380 0.872 - - - - - - - 0.872 - - proteasome 26S subunit, non-ATPase 10 [Source:NCBI gene;Acc:422351]
23. TDP2 ENSGALG00000013637 6595 0.872 - - - - - - - 0.872 - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
24. RCN2 ENSGALG00000039284 17848 0.869 - - - - - - - 0.869 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
25. SLC12A4 ENSGALG00000034179 5674 0.866 - - - - - - - 0.866 - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
26. NUDT7 ENSGALG00000034395 7396 0.866 - - - - - - - 0.866 - - nudix hydrolase 7 [Source:NCBI gene;Acc:415800]
27. B4GAL-T7 B4GAL-T7 12356 0.861 - - - - - - - 0.861 - -
28. SRBD1 ENSGALG00000009990 4568 0.86 - - - - - - - 0.860 - - S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
29. EMC3 ENSGALG00000003738 10363 0.858 - - - - - - - 0.858 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
30. INCENP ENSGALG00000007537 16617 0.858 - - - - - - - 0.858 - - inner centromere protein [Source:NCBI gene;Acc:396270]
31. RFC1 ENSGALG00000014298 6516 0.858 - - - - - - - 0.858 - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
32. ACP1 ENSGALG00000016363 10636 0.857 - - - - - - - 0.857 - - acid phosphatase 1 [Source:NCBI gene;Acc:421909]
33. PEX10 ENSGALG00000001223 5704 0.852 - - - - - - - 0.852 - - peroxisomal biogenesis factor 10 [Source:NCBI gene;Acc:419396]
34. ATR ENSGALG00000002663 4626 0.851 - - - - - - - 0.851 - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
35. URM1 ENSGALG00000004971 17880 0.848 - - - - - - - 0.848 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
36. FAM18B1 ENSGALG00000001335 5177 0.846 - - - - - - - 0.846 - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
37. YRDC ENSGALG00000029001 6529 0.844 - - - - - - - 0.844 - - yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
38. ADRM1 ENSGALG00000005200 5417 0.844 - - - - - - - 0.844 - - adhesion regulating molecule 1 [Source:NCBI gene;Acc:395365]
39. HEATR3 ENSGALG00000041613 2704 0.844 - - - - - - - 0.844 - - HEAT repeat containing 3 [Source:NCBI gene;Acc:415734]
40. VPS36 ENSGALG00000017026 3658 0.841 - - - - - - 0.841 - - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
41. MSH6 ENSGALG00000008957 6396 0.841 - - - - - - - 0.841 - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
42. MRPL55 5995 0.84 - - - - - - - 0.840 - - mitochondrial ribosomal protein L55
43. SIPA1L1 ENSGALG00000009381 4019 0.838 - - - - - - - 0.838 - - signal induced proliferation associated 1 like 1 [Source:NCBI gene;Acc:423255]
44. COBRA1 COBRA1 4600 0.838 - - - - - - - 0.838 - -
45. ARFIP1 ENSGALG00000041361 7351 0.838 - - - - - - - 0.838 - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
46. CTNNBL1 ENSGALG00000006817 6765 0.837 - - - - - - - 0.837 - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
47. ENSGALG00000001861 ENSGALG00000001861 10150 0.835 - - - - - - - 0.835 - -
48. DSCR3 3583 0.835 - - - - - - - 0.835 - - DSCR3 arrestin fold containing, transcript variant X1
49. SREK1 ENSGALG00000014775 13961 0.834 - - - - - - - 0.834 - - splicing regulatory glutamic acid and lysine rich protein 1, transcript variant X3
50. TAF13 ENSGALG00000015185 11410 0.833 - - - - - - - 0.833 - - TATA-box binding protein associated factor 13 [Source:NCBI gene;Acc:418365]
51. DNAJB11 ENSGALG00000006564 9353 0.833 - - - - - - - 0.833 - - DnaJ heat shock protein family (Hsp40) member B11
52. STRN3 ENSGALG00000040464 9045 0.833 - - - - - - - 0.833 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
53. DPY30 ENSGALG00000010621 6818 0.832 - - - - - - - 0.832 - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
54. PLK1 ENSGALG00000006110 12892 0.831 - - - - - - - 0.831 - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
55. PUF60 ENSGALG00000039901 26902 0.831 - - - - - - - 0.831 - - poly(U) binding splicing factor 60 [Source:NCBI gene;Acc:426402]
56. NAA20 ENSGALG00000012587 11349 0.831 - - - - - - - 0.831 - - N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]
57. DJ-1 DJ-1 13462 0.831 - - - - - - - 0.831 - -
58. XBP1 ENSGALG00000005796 14007 0.831 - - - - - - - 0.831 - - X-box binding protein 1 [Source:NCBI gene;Acc:416918]
59. KTN1 ENSGALG00000012137 4058 0.83 - - - - - - - 0.830 - - kinectin 1 [Source:NCBI gene;Acc:396335]
60. CHRAC1 ENSGALG00000040823 5695 0.829 - - - - - - - 0.829 - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
61. TM4SF18 4553 0.829 - - - - - - - 0.829 - - transmembrane 4 L six family member 18, transcript variant X2
62. MRPL2 ENSGALG00000008597 16500 0.828 - - - - - - - 0.828 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
63. BLMH ENSGALG00000004259 36907 0.828 - - - - - - - 0.828 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
64. CDK5RAP2 ENSGALG00000041102 4042 0.827 - - - - - - - 0.827 - - CDK5 regulatory subunit associated protein 2 [Source:HGNC Symbol;Acc:HGNC:18672]
65. CENPK ENSGALG00000014753 12414 0.826 - - - - - - - 0.826 - - centromere protein K [Source:NCBI gene;Acc:427162]
66. MEF2BNB MEF2BNB 5578 0.825 - - - - - - - 0.825 - -
67. TRAPPC6B ENSGALG00000010157 7567 0.824 - - - - - - - 0.824 - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
68. PCM1 ENSGALG00000013602 6347 0.824 - - - - - - - 0.824 - - pericentriolar material 1 [Source:NCBI gene;Acc:395204]
69. GCSH ENSGALG00000032679 29231 0.822 - - - - - - - 0.822 - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
70. NDUFS5 ENSGALG00000003625 27698 0.822 - - - - - - - 0.822 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
71. C10orf88 ENSGALG00000000011 6026 0.821 - - - - - - - 0.821 - - chromosome 10 open reading frame 88 [Source:HGNC Symbol;Acc:HGNC:25822]
72. MTAP ENSGALG00000008174 10976 0.821 - - - - - - - 0.821 - - methylthioadenosine phosphorylase [Source:NCBI gene;Acc:431261]
73. HOXA5 ENSGALG00000025929 6231 0.821 - - - - - - - 0.821 - - homeobox A5 [Source:NCBI gene;Acc:100858404]
74. EBAG9 ENSGALG00000036293 10058 0.821 - - - - - - - 0.821 - - estrogen receptor binding site associated, antigen, 9 [Source:NCBI gene;Acc:420276]
75. ATP5J 14451 0.819 - - - - - - - 0.819 - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
76. CHMP4B ENSGALG00000002095 17422 0.818 - - - - - - - 0.818 - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
77. PWP1 ENSGALG00000012631 10536 0.818 - - - - - - - 0.818 - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
78. GFM1 ENSGALG00000009634 7213 0.818 - - - - - - - 0.818 - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
79. MSH2 ENSGALG00000008962 9709 0.818 - - - - - - - 0.818 - - mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]
80. FAM63B 3793 0.817 - - - - - - - 0.817 - - family with sequence similarity 63 member B
81. RAE1 ENSGALG00000007653 8930 0.815 - - - - - - 0.815 - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
82. TMEM41A ENSGALG00000006649 3309 0.815 - - - - - - - 0.815 - - transmembrane protein 41A [Source:NCBI gene;Acc:424875]
83. DCTD ENSGALG00000010674 8396 0.814 - - - - - - - 0.814 - - dCMP deaminase [Source:NCBI gene;Acc:422556]
84. TRAF3IP1 ENSGALG00000004236 7094 0.813 - - - - - - - 0.813 - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
85. SUV39H2 ENSGALG00000013920 4360 0.813 - - - - - - - 0.813 - - suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
86. GTF2B ENSGALG00000006205 6950 0.812 - - - - - - 0.812 - - - general transcription factor IIB [Source:HGNC Symbol;Acc:HGNC:4648]
87. GPN3 ENSGALG00000003807 6320 0.811 - - - - - - - 0.811 - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
88. EXOSC8 ENSGALG00000017048 2939 0.811 - - - - - - - 0.811 - - exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]
89. NUP93 ENSGALG00000003010 16504 0.811 - - - - - - - 0.811 - - nucleoporin 93 [Source:NCBI gene;Acc:415693]
90. C4orf27 C4orf27 16724 0.81 - - - - - - - 0.810 - -
91. MSMO1 ENSGALG00000009560 6928 0.809 - - - - - - - 0.809 - - methylsterol monooxygenase 1 [Source:NCBI gene;Acc:422423]
92. ADSS ENSGALG00000010702 7207 0.809 - - - - - - - 0.809 - - adenylosuccinate synthase [Source:NCBI gene;Acc:428579]
93. ENSGALG00000012451 ENSGALG00000012451 7912 0.808 - - - - - - - 0.808 - -
94. ARF6 ENSGALG00000026944 22014 0.808 - - - - - - 0.808 - - - ADP ribosylation factor 6 [Source:NCBI gene;Acc:428927]
95. DNM1L ENSGALG00000012929 6174 0.808 - - - - - - - 0.808 - - dynamin 1 like [Source:NCBI gene;Acc:418132]
96. CTSL2 CTSL2 7966 0.807 - - - - - - - 0.807 - -
97. EIF5B ENSGALG00000016764 30681 0.806 - - - - - - - 0.806 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
98. C11H16ORF80 C11H16ORF80 18673 0.805 - - - - - - - 0.805 - -
99. SDF2L1 ENSGALG00000031982 6084 0.804 - - - - - - - 0.804 - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
100. CCNC ENSGALG00000015471 6497 0.804 - - - - - - - 0.804 - - cyclin C [Source:NCBI gene;Acc:421791]

There are 455 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA