Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for HSCB

Gene Name Gene ID Reads Annotation
HSCB HSCB 395










Genes with expression patterns similar to HSCB

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. HSCB HSCB 395 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. setd1ba ENSDARG00000060847, ENSDARG00000111265 146 0.94 - - - - - - 0.940 - - SET domain containing 1B, a [Source:ZFIN;Acc:ZDB-GENE-050309-289]
3. eapp ENSDARG00000017272 404 0.916 - - - - - - 0.916 - - e2f-associated phosphoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-5529]
4. zgc:173994 zgc:173994 204 0.916 - - - - - - 0.916 - -
5. si:dkey-17e16.8 284 0.913 - - - - - - 0.913 - - si:dkey-17e16.8
6. micall1 micall1 720 0.907 - 0.907 - - - - - - -
7. DNAH11 ENSDARG00000077384, ENSDARG00000094282 372 0.907 - - - - - - 0.907 - - dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
8. stk3 ENSDARG00000011312, ENSDARG00000115118 460 0.904 - - - - - - 0.904 - - serine/threonine kinase 3 (STE20 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-2845]
9. RSPH1 289 0.901 - 0.901 - - - - - - - radial spoke head 1 homolog (Chlamydomonas), transcript variant X2
10. kiaa0907 1674 0.897 - 0.897 - - - - - - - KIAA0907 protein, transcript variant X7
11. IL17RD ENSDARG00000098359 2309 0.896 - - - - - - 0.896 - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
12. OXR1 OXR1 378 0.896 - - - - - - 0.896 - -
13. dhrs13a.1 ENSDARG00000026322 336 0.894 - - - - - - 0.894 - - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041114-58]
14. retsat ENSDARG00000018600 832 0.892 - - - - - - 0.892 - - retinol saturase (all-trans-retinol 13,14-reductase) [Source:ZFIN;Acc:ZDB-GENE-050320-11]
15. acot8 ENSDARG00000014138 89 0.891 - - - - - - 0.891 - - acyl-CoA thioesterase 8 [Source:ZFIN;Acc:ZDB-GENE-041010-174]
16. fam20b ENSDARG00000008573 1084 0.888 - - - - - - 0.888 - - family with sequence similarity 20, member B (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-040724-125]
17. bcl9 ENSDARG00000036687 1124 0.88 - - - - - - 0.880 - - B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
18. si:dkeyp-72g6.2 si:dkeyp-72g6.2 121 0.877 - - - - - - 0.877 - -
19. slc22a18 ENSDARG00000052271 193 0.868 - 0.868 - - - - - - - solute carrier family 22, member 18 [Source:ZFIN;Acc:ZDB-GENE-051120-165]
20. smad5 ENSDARG00000037238 1684 0.867 - 0.867 - - - - - - - SMAD family member 5 [Source:ZFIN;Acc:ZDB-GENE-990603-9]
21. dnajb9b ENSDARG00000016886 270 0.866 - - - - - - 0.866 - - DnaJ (Hsp40) homolog, subfamily B, member 9b [Source:ZFIN;Acc:ZDB-GENE-050522-76]
22. ankhb ENSDARG00000014969 328 0.865 - - - - - - 0.865 - - ANKH inorganic pyrophosphate transport regulator b [Source:ZFIN;Acc:ZDB-GENE-030131-2458]
23. PHLDB2 PHLDB2 1164 0.864 - - - - - - 0.864 - -
24. klhl38 klhl38 44 0.861 0.861 - - - - - - - -
25. wnt6b ENSDARG00000073935 236 0.861 - - - - - - 0.861 - - wingless-type MMTV integration site family, member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-513]
26. B3GNT2_1 B3GNT2_1 380 0.86 - - - - - - 0.860 - -
27. ecd ENSDARG00000022944, ENSDARG00000114710 273 0.857 - - - - - - 0.857 - - ecdysoneless homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6304]
28. CABZ01078889.1 CABZ01078889.1 911 0.856 - 0.856 - - - - - - -
29. capn7 ENSDARG00000102987 386 0.853 - - - - - - 0.853 - - calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
30. slc6a13l 121 0.853 - - - - - - 0.853 - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
31. CU855890.3 CU855890.3 307 0.853 - - - - - - 0.853 - -
32. alg2 ENSDARG00000070399 772 0.852 - - - - - - 0.852 - - asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060502-2]
33. vasna ENSDARG00000099266, ENSDARG00000111629 488 0.85 - - - - - - 0.850 - - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
34. gne ENSDARG00000099771 617 0.85 - - - - - - 0.850 - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1848]
35. gatsl2 1618 0.848 - - - - - - 0.848 - - GATS protein-like 2
36. si:ch211-113e8.10 ENSDARG00000079631 498 0.848 - - - - - - 0.848 - - si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
37. SNAP23 SNAP23 270 0.847 - 0.847 - - - - - - -
38. abhd16a ENSDARG00000078929 1115 0.843 - - - - - - 0.843 - - abhydrolase domain containing 16A [Source:ZFIN;Acc:ZDB-GENE-010601-2]
39. abcc4 ENSDARG00000058953, ENSDARG00000115375 1990 0.843 - - - - - - 0.843 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 4 [Source:ZFIN;Acc:ZDB-GENE-030616-511]
40. cnih4 ENSDARG00000087759 3937 0.841 - - - - - - 0.841 - - cornichon family AMPA receptor auxiliary protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-868]
41. sos2 ENSDARG00000060506 769 0.838 - 0.838 - - - - - - - son of sevenless homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090319-5]
42. brf1b ENSDARG00000005002, ENSDARG00000115325 276 0.837 - - - - - - 0.837 - - BRF1, RNA polymerase III transcription initiation factor b [Source:ZFIN;Acc:ZDB-GENE-030131-6248]
43. vps8 ENSDARG00000060477, ENSDARG00000113757 271 0.836 - 0.836 - - - - - - - vacuolar protein sorting 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-348]
44. fam20c fam20c 603 0.834 - - - - - - 0.834 - -
45. zgc:101664 ENSDARG00000035700 530 0.833 - - - - - - 0.833 - - zgc:101664 [Source:ZFIN;Acc:ZDB-GENE-041010-187]
46. AMBRA1 AMBRA1 382 0.833 - - - - - - 0.833 - -
47. cmtm6 ENSDARG00000099631 641 0.831 - - - - - - 0.831 - - CKLF-like MARVEL transmembrane domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030729-15]
48. dapk1 ENSDARG00000060093 351 0.83 - - - - - - 0.830 - - death-associated protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-177]
49. zyg11 ENSDARG00000007737 511 0.827 - - - - - - 0.827 - - zyg-11 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041014-17]
50. SFT2D2 SFT2D2 431 0.825 - 0.825 - - - - - - -
51. kdm2bb ENSDARG00000046010 747 0.825 - - - - - - 0.825 - - lysine (K)-specific demethylase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080225-13]
52. pnpo ENSDARG00000017612, ENSDARG00000109509 570 0.824 - - - - - - 0.824 - - pyridoxamine 5'-phosphate oxidase [Source:ZFIN;Acc:ZDB-GENE-060602-2]
53. C18H16orf70 C18H16orf70 542 0.823 - - - - - - 0.823 - -
54. parp6a ENSDARG00000042703 112 0.822 0.822 - - - - - - - - poly (ADP-ribose) polymerase family, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-272]
55. si:dkey-162b3.5 si:dkey-162b3.5 24 0.822 0.822 - - - - - - - -
56. si:ch73-343l4.2 ENSDARG00000079903 10 0.822 0.822 - - - - - - - - si:ch73-343l4.2 [Source:ZFIN;Acc:ZDB-GENE-090313-154]
57. tmem59l ENSDARG00000003655 1536 0.822 - 0.822 - - - - - - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
58. CR628365.1 ENSDARG00000097736 29 0.821 0.821 - - - - - - - -
59. pcnt ENSDARG00000033012 664 0.82 - - - - - - 0.820 - - pericentrin [Source:ZFIN;Acc:ZDB-GENE-030829-26]
60. ccdc174 ENSDARG00000023858 432 0.819 - 0.819 - - - - - - - coiled-coil domain containing 174 [Source:ZFIN;Acc:ZDB-GENE-050320-54]
61. TXNDC16 ENSDARG00000032256 231 0.817 - - - - - - 0.817 - - thioredoxin domain containing 16 [Source:ZFIN;Acc:ZDB-GENE-100712-1]
62. TMEM230 TMEM230 351 0.815 - - - - - - 0.815 - -
63. kita ENSDARG00000043317 1091 0.813 - - - - - - 0.813 - - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-980526-464]
64. nde1 ENSDARG00000103902 557 0.813 - - - - - - 0.813 - - nudE neurodevelopment protein 1 [Source:ZFIN;Acc:ZDB-GENE-050913-61]
65. SNORD35 SNORD35 245 0.812 0.812 - - - - - - - -
66. RC3H1 RC3H1 22 0.812 0.812 - - - - - - - -
67. acbd5a ENSDARG00000034883 300 0.812 - 0.812 - - - - - - - acyl-CoA binding domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-050522-268]
68. cnep1r1 ENSDARG00000036064 1440 0.812 - 0.812 - - - - - - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050417-425]
69. akt2l ENSDARG00000103612 537 0.809 - - - - - - 0.809 - - v-akt murine thymoma viral oncogene homolog 2, like [Source:ZFIN;Acc:ZDB-GENE-040121-5]
70. dcaf6 ENSDARG00000078311 1118 0.809 - - - - - - 0.809 - - ddb1 and cul4 associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-090206-2]
71. ptplad1 ptplad1 1084 0.809 - - - - - - 0.809 - -
72. capn8 ENSDARG00000055715, ENSDARG00000111228 497 0.808 - - - - - - 0.808 - - calpain 8 [Source:ZFIN;Acc:ZDB-GENE-050522-279]
73. GIGYF1 1830 0.808 - - - - - - 0.808 - - GRB10 interacting GYF protein 1, transcript variant X6
74. gnal ENSDARG00000045415 164 0.807 - 0.807 - - - - - - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type [Source:ZFIN;Acc:ZDB-GENE-041114-26]
75. tbc1d12a ENSDARG00000038237 698 0.803 - - - - - - 0.803 - - TBC1 domain family, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3920]
76. FDXACB1 ENSDARG00000095750 98 0.802 0.802 - - - - - - - - ferredoxin-fold anticodon binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8403]
77. kdm2aa ENSDARG00000059653 2389 0.802 - 0.802 - - - - - - - lysine (K)-specific demethylase 2Aa [Source:ZFIN;Acc:ZDB-GENE-061215-144]
78. GPSM3 GPSM3 257 0.802 0.802 - - - - - - - -
79. acp6 ENSDARG00000040064 197 0.801 - 0.801 - - - - - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
80. rab3c ENSDARG00000014462, ENSDARG00000042803 508 0.801 - - - - - - 0.801 - - RAB3C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-263]
81. zgc:64189 ENSDARG00000033501 244 0.8 - - - - - - 0.800 - - zgc:64189 [Source:ZFIN;Acc:ZDB-GENE-040426-1397]
82. si:ch73-30n17.4 si:ch73-30n17.4 650 0.8 - - - - - - 0.800 - -
83. zgc:122979 ENSDARG00000004187 61 0.799 0.799 - - - - - - - - zgc:122979 [Source:ZFIN;Acc:ZDB-GENE-051127-45]
84. SHROOM2 SHROOM2 934 0.798 - - - - - - 0.798 - -
85. si:ch211-232i5.1 ENSDARG00000078072 1337 0.798 - - - - - - 0.798 - - si:ch211-232i5.1 [Source:ZFIN;Acc:ZDB-GENE-070705-127]
86. glsb ENSDARG00000040705 1439 0.797 - - - - - - 0.797 - - glutaminase b [Source:ZFIN;Acc:ZDB-GENE-030616-550]
87. dnase1l3 dnase1l3 455 0.796 - - - - - - 0.796 - -
88. ENSDARG00000086666 ENSDARG00000086666 2159 0.796 - 0.796 - - - - - - -
89. efcab11 ENSDARG00000043740 178 0.796 - 0.796 - - - - - - - EF-hand calcium binding domain 11 [Source:ZFIN;Acc:ZDB-GENE-050417-348]
90. ISCU ISCU 3648 0.795 - - - - - - 0.795 - -
91. stk17a ENSDARG00000074715 528 0.795 - 0.795 - - - - - - - serine/threonine kinase 17a [Source:ZFIN;Acc:ZDB-GENE-030131-5556]
92. mtap ENSDARG00000037261 610 0.795 - 0.795 - - - - - - - methylthioadenosine phosphorylase [Source:ZFIN;Acc:ZDB-GENE-040426-1505]
93. carhsp1 ENSDARG00000053129 2100 0.792 - - - - - - 0.792 - - calcium regulated heat stable protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1479]
94. socs2 ENSDARG00000045557 340 0.792 - 0.792 - - - - - - - suppressor of cytokine signaling 2 [Source:ZFIN;Acc:ZDB-GENE-041210-171]
95. AOC3 AOC3 590 0.792 - - - - - - 0.792 - -
96. si:dkey-172m14.1 ENSDARG00000052693 875 0.791 - - - - - - 0.791 - - si:dkey-172m14.1 [Source:ZFIN;Acc:ZDB-GENE-060526-221]
97. setd7 ENSDARG00000038858 1072 0.791 - - - - - 0.791 - - - SET domain containing (lysine methyltransferase) 7 [Source:ZFIN;Acc:ZDB-GENE-040718-156]
98. NAGPA ENSDARG00000075149 983 0.791 - - - - - - 0.791 - - N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-070928-4]
99. jmjd7 ENSDARG00000035546 222 0.791 0.791 - - - - - - - - jumonji domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-050417-86]
100. PLD5 PLD5 496 0.791 - - - - - - 0.791 - -

There are 312 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA