Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HPS3

Gene Name Gene ID Reads Annotation
HPS3 ENSGALG00000040089 44 HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]











Genes with expression patterns similar to HPS3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HPS3 ENSGALG00000040089 44 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
2. RMDN3 ENSGALG00000035242 680 1.616 - - 0.719 - - - - 0.897 - - regulator of microtubule dynamics 3 [Source:HGNC Symbol;Acc:HGNC:25550]
3. MTMR14 ENSGALG00000006601 1435 1.508 - - 0.726 - - - - 0.782 - - myotubularin related protein 14 [Source:NCBI gene;Acc:416048]
4. CDKN2AIP ENSGALG00000010661 1218 1.494 - - 0.728 - - - - 0.766 - - CDKN2A interacting protein [Source:HGNC Symbol;Acc:HGNC:24325]
5. ENSGALG00000010218 ENSGALG00000010218 12 1 - - - - - - 1.000 - - -
6. MMP13 ENSGALG00000017183 7 1 - - - - - - 1.000 - - - matrix metallopeptidase 13 [Source:NCBI gene;Acc:395683]
7. POLR1A ENSGALG00000038160 236 1 - - - - - - 1.000 - - - RNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:17264]
8. ENSGALG00000027367 ENSGALG00000027367 7 1 - - - - - - 1.000 - - -
9. LHX8 ENSGALG00000011369 77 1 - - - - - - 1.000 - - - LIM homeobox 8 [Source:NCBI gene;Acc:424721]
10. ST8SIA6 ENSGALG00000008671 8 1 - - - - - - 1.000 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:NCBI gene;Acc:414335]
11. ZBTB11 ENSGALG00000015334 22 1 - - - - - - 1.000 - - - zinc finger and BTB domain containing 11 [Source:HGNC Symbol;Acc:HGNC:16740]
12. TRIM25 ENSGALG00000003144 12 1 - - - - - - 1.000 - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
13. CBLN4 ENSGALG00000030821 9 1 - - - - - - 1.000 - - - cerebellin 4 precursor [Source:NCBI gene;Acc:769254]
14. SNORD79 SNORD79 12 1 - - - - - - 1.000 - - -
15. SPERT ENSGALG00000016981 145 1 - - - - - - 1.000 - - - spermatid associated [Source:NCBI gene;Acc:418848]
16. KCNV1 ENSGALG00000031449 64 1 - - - - - - 1.000 - - - potassium voltage-gated channel modifier subfamily V member 1
17. FGF13 ENSGALG00000006508 8 1 - - - - - - 1.000 - - - fibroblast growth factor 13 [Source:NCBI gene;Acc:414831]
18. FGA ENSGALG00000009266 291 1 - - - - - - 1.000 - - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
19. GLRA2 ENSGALG00000016571 10 1 - - - - - - 1.000 - - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
20. DIRAS2 ENSGALG00000005323 11 1 - - - - - - 1.000 - - - DIRAS family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:19323]
21. VRK2 ENSGALG00000032770 117 1 - - - - - - 1.000 - - - vaccinia related kinase 2 [Source:HGNC Symbol;Acc:HGNC:12719]
22. RD RD 99 1 - - - - - - 1.000 - - -
23. FOXP1 127 1 - - - - - - 1.000 - - - forkhead box P1, transcript variant X14
24. PLA2G1BL ENSGALG00000007236 4 1 - - - - - - 1.000 - - - phospholipase A2, major isoenzyme-like
25. LZTS2 ENSGALG00000023612 9 1 - - - - - - 1.000 - - - leucine zipper tumor suppressor 2 [Source:HGNC Symbol;Acc:HGNC:29381]
26. LOC427545 ENSGALG00000004428 3 1 - - - - - - 1.000 - - - histamine H3 receptor-like
27. ADAM23 ENSGALG00000008582 28 1 - - - - - - 1.000 - - - ADAM metallopeptidase domain 23 [Source:NCBI gene;Acc:424099]
28. FGD4 ENSGALG00000012932 50 1 - - - - - - 1.000 - - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
29. EGR4 ENSGALG00000016086 4 1 - - - - - - 1.000 - - - early growth response 4 [Source:HGNC Symbol;Acc:HGNC:3241]
30. COL4A3BP ENSGALG00000014952 96 1 - - - - - - 1.000 - - - collagen type IV alpha 3 binding protein [Source:HGNC Symbol;Acc:HGNC:2205]
31. P2RY13 ENSGALG00000039432 16 1 - - - - - - 1.000 - - - purinergic receptor P2Y13 [Source:HGNC Symbol;Acc:HGNC:4537]
32. TRIM2 ENSGALG00000009207 44 0.979 - - - - - - - 0.979 - - tripartite motif containing 2 [Source:NCBI gene;Acc:100857562]
33. SLC25A29 ENSGALG00000011220 17 0.979 - - - - - - - 0.979 - - solute carrier family 25 member 29 [Source:HGNC Symbol;Acc:HGNC:20116]
34. EIF4ENIF1 ENSGALG00000006898 24 0.979 - - - - - - - 0.979 - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:HGNC Symbol;Acc:HGNC:16687]
35. CCDC152 CCDC152 28 0.978 - - - - - - - 0.978 - -
36. NKD1 ENSGALG00000003767 76 0.978 - - - - - - - 0.978 - - naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
37. SPP1 ENSGALG00000010926 8 0.978 - - - - - - - 0.978 - - secreted phosphoprotein 1 [Source:NCBI gene;Acc:395210]
38. UNC45A ENSGALG00000029714 158 0.978 - - - - - - - 0.978 - - unc-45 myosin chaperone A [Source:HGNC Symbol;Acc:HGNC:30594]
39. MGMT ENSGALG00000042949 53 0.978 - - - - - - - 0.978 - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
40. ENSGALG00000022857 ENSGALG00000022857 4 0.978 - - - - - - - 0.978 - -
41. ENSGALG00000005511 ENSGALG00000005511 7 0.978 - - - - - - - 0.978 - -
42. YAE1D1 23 0.978 - - - - - - - 0.978 - - Yae1 domain containing 1, transcript variant X2
43. ATP7B ENSGALG00000017021 7 0.978 - - - - - - - 0.978 - - ATPase copper transporting beta [Source:HGNC Symbol;Acc:HGNC:870]
44. GABARAPL3 GABARAPL3 32 0.978 - - - - - - - 0.978 - -
45. BRSK2 ENSGALG00000006681 158 0.978 - - - - - - - 0.978 - - BR serine/threonine kinase 2 [Source:NCBI gene;Acc:423098]
46. ENSGALG00000005543 ENSGALG00000005543 2 0.978 - - - - - - - 0.978 - -
47. ENSGALG00000011516 ENSGALG00000011516 24 0.973 - - - - - - - 0.973 - -
48. ELOVL2 ENSGALG00000012748 97 0.973 - - - - - - - 0.973 - - ELOVL fatty acid elongase 2 [Source:NCBI gene;Acc:420858]
49. CXorf30 CXorf30 172 0.966 - - - - - - - 0.966 - -
50. LHX2 ENSGALG00000001124 18 0.965 - - - - - - - 0.965 - - LIM homeobox 2 [Source:NCBI gene;Acc:395705]
51. CASR ENSGALG00000038405 53 0.964 - - - - - - - 0.964 - - calcium sensing receptor [Source:HGNC Symbol;Acc:HGNC:1514]
52. PRKCE ENSGALG00000010000 99 0.962 - - 0.962 - - - - - - - protein kinase C epsilon, transcript variant X1
53. FAM122B ENSGALG00000006108 16 0.959 - - - - - - - 0.959 - - family with sequence similarity 122B [Source:HGNC Symbol;Acc:HGNC:30490]
54. TSPAN14 ENSGALG00000002414 69 0.958 - - 0.958 - - - - - - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
55. CBS ENSGALG00000016196 8 0.952 - - - - - - - 0.952 - - cystathionine-beta-synthase, transcript variant X3
56. CLEC3B ENSGALG00000030969 363 0.95 - - 0.950 - - - - - - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
57. SCN3B ENSGALG00000006490 48 0.949 - - - - - - - 0.949 - - sodium voltage-gated channel beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:20665]
58. LAMB2 ENSGALG00000006802 325 0.948 - - - - - - - 0.948 - - laminin, beta 2 (laminin S) [Source:NCBI gene;Acc:373980]
59. CLMN ENSGALG00000030719 60 0.947 - - - - - - - 0.947 - - calmin [Source:HGNC Symbol;Acc:HGNC:19972]
60. CX3CL1 ENSGALG00000026663 218 0.946 - - - - - - - 0.946 - - C-X3-C motif chemokine ligand 1 [Source:NCBI gene;Acc:415651]
61. ABRA ENSGALG00000041043 16 0.938 - - - - - - - 0.938 - - actin binding Rho activating protein [Source:HGNC Symbol;Acc:HGNC:30655]
62. RCAN1 ENSGALG00000016014 95 0.937 - - 0.937 - - - - - - - regulator of calcineurin 1 [Source:NCBI gene;Acc:418510]
63. PCLO 249 0.933 - - - - - - - 0.933 - - piccolo presynaptic cytomatrix protein
64. ARFGEF1 ENSGALG00000034610 238 0.931 - - 0.931 - - - - - - - ADP ribosylation factor guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:15772]
65. LRRC52 ENSGALG00000003443 20 0.93 - - - - - - - 0.930 - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
66. PLXNC1 ENSGALG00000011309 69 0.928 - - - - - - 0.928 - - - plexin C1 [Source:HGNC Symbol;Acc:HGNC:9106]
67. TNFRSF19 ENSGALG00000017119 25 0.926 - - - - - - - 0.926 - - TNF receptor superfamily member 19 [Source:NCBI gene;Acc:418943]
68. CHST3 ENSGALG00000024056 308 0.926 - - - - - - 0.926 - - - carbohydrate sulfotransferase 3 [Source:NCBI gene;Acc:396018]
69. COBLL1 ENSGALG00000011068 111 0.925 - - - - - - - 0.925 - - cordon-bleu WH2 repeat protein like 1 [Source:HGNC Symbol;Acc:HGNC:23571]
70. NMRK1 ENSGALG00000015156 88 0.915 - - - - - - - 0.915 - - nicotinamide riboside kinase 1 [Source:HGNC Symbol;Acc:HGNC:26057]
71. PIK3R2 ENSGALG00000003428 205 0.911 - - - - - - - 0.911 - - phosphoinositide-3-kinase regulatory subunit 2
72. ZNF341 ENSGALG00000002968 1028 0.91 - - 0.910 - - - - - - - zinc finger protein 341 [Source:NCBI gene;Acc:419152]
73. SLC29A4 ENSGALG00000010497 43 0.903 - - - - - - - 0.903 - - solute carrier family 29 member 4 [Source:HGNC Symbol;Acc:HGNC:23097]
74. NMNAT1 ENSGALG00000043318 471 0.903 - - 0.903 - - - - - - - nicotinamide nucleotide adenylyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:17877]
75. KIDINS220 ENSGALG00000016409 854 0.901 - - 0.901 - - - - - - - kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
76. SAMD15 ENSGALG00000010457 69 0.899 - - - - - - - 0.899 - - sterile alpha motif domain containing 15
77. SYNRG ENSGALG00000005468 27 0.898 - - - - - - - 0.898 - - synergin gamma [Source:HGNC Symbol;Acc:HGNC:557]
78. TBC1D2B ENSGALG00000003322 54 0.898 - - - - - - 0.898 - - - TBC1 domain family member 2B [Source:HGNC Symbol;Acc:HGNC:29183]
79. TCP11L2 ENSGALG00000012658 1671 0.897 - - 0.897 - - - - - - - t-complex 11 like 2 [Source:NCBI gene;Acc:425052]
80. PPP2R5E ENSGALG00000011840 176 0.896 - - - - - - - 0.896 - - protein phosphatase 2 regulatory subunit B'epsilon [Source:HGNC Symbol;Acc:HGNC:9313]
81. KLF6 ENSGALG00000033178 679 0.893 - - 0.893 - - - - - - - Kruppel like factor 6 [Source:NCBI gene;Acc:420463]
82. PDE7B ENSGALG00000013941 49 0.892 - - - - - - - 0.892 - - phosphodiesterase 7B [Source:HGNC Symbol;Acc:HGNC:8792]
83. FANCB ENSGALG00000016569 1193 0.891 - - 0.891 - - - - - - - FA complementation group B [Source:NCBI gene;Acc:418628]
84. TRPS1 ENSGALG00000031700 39 0.891 - - - - - - - 0.891 - - transcriptional repressor GATA binding 1 [Source:HGNC Symbol;Acc:HGNC:12340]
85. DMXL1 ENSGALG00000002227 88 0.89 - - - - - - 0.890 - - - Dmx like 1 [Source:HGNC Symbol;Acc:HGNC:2937]
86. GPRC5B ENSGALG00000002028 28 0.888 - - - - - - 0.888 - - - G protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]
87. OVCH2 ENSGALG00000005318 8 0.888 - - - - - - 0.888 - - - ovochymase 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:29970]
88. GOS2 GOS2 116 0.886 - - - - - - - 0.886 - -
89. C17orf62 C17orf62 37 0.881 - - - - - - - 0.881 - -
90. EML5 ENSGALG00000010639 25 0.875 - - 0.875 - - - - - - - echinoderm microtubule associated protein like 5, transcript variant X1
91. SULT6B1 ENSGALG00000046375 23 0.874 - - - - - - 0.874 - - - sulfotransferase family 6B member 1 [Source:HGNC Symbol;Acc:HGNC:33433]
92. AHR2 ENSGALG00000023742 21 0.874 - - 0.874 - - - - - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
93. ADCK2 ENSGALG00000012863 906 0.873 - - 0.873 - - - - - - - aarF domain containing kinase 2 [Source:HGNC Symbol;Acc:HGNC:19039]
94. C15orf60 C15orf60 16 0.871 - - 0.871 - - - - - - -
95. ATXN3 ENSGALG00000010766 48 0.87 - - 0.870 - - - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
96. PUSL1_1 ENSGALG00000001701, ENSGALG00000001714 341 0.867 - - 0.867 - - - - - - - pseudouridylate synthase-like 1, transcript variant X8
97. DNALI1 ENSGALG00000001996 64 0.867 - - 0.867 - - - - - - - dynein axonemal light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:14353]
98. ENSGALG00000015793 ENSGALG00000015793 12 0.867 - - - - - - 0.867 - - -
99. IMPA1 ENSGALG00000034487 3691 0.866 - - 0.866 - - - - - - - inositol monophosphatase 1 [Source:HGNC Symbol;Acc:HGNC:6050]
100. FSCN2 ENSGALG00000023354 13 0.865 - - 0.865 - - - - - - - fascin actin-bundling protein 2, retinal [Source:NCBI gene;Acc:429198]

There are 218 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA