Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for HPS1

Gene Name Gene ID Reads Annotation
HPS1 ENSGALG00000017419 700 HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 [Source:NCBI gene;Acc:429879]











Genes with expression patterns similar to HPS1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HPS1 ENSGALG00000017419 700 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 [Source:NCBI gene;Acc:429879]
2. RBBP8NL ENSGALG00000045938 89 1.587 - - - - - 0.799 - 0.788 - - RBBP8 N-terminal like [Source:HGNC Symbol;Acc:HGNC:16144]
3. EDARADD ENSGALG00000031763 541 1.499 - - - - - 0.723 - 0.776 - - EDAR associated death domain [Source:NCBI gene;Acc:497625]
4. CTSB ENSGALG00000030016 177 0.902 - - - - - - - 0.902 - - cathepsin B [Source:NCBI gene;Acc:396329]
5. ADAP2 ENSGALG00000003319 134 0.862 - - - - - 0.862 - - - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
6. ENSGALG00000000193 ENSGALG00000000193 19 0.859 - - - - - 0.859 - - - -
7. SSPN ENSGALG00000014042 638 0.858 - - - - - - - 0.858 - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
8. AFG3L2_1 ENSGALG00000013853 1319 0.854 - - - - - - - 0.854 - - AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
9. SCARB2 ENSGALG00000011499 2763 0.854 - - - - - - - 0.854 - - scavenger receptor class B member 2 [Source:HGNC Symbol;Acc:HGNC:1665]
10. BTBD10 ENSGALG00000005369 56 0.85 - - - - - 0.850 - - - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
11. EREG ENSGALG00000010864 46 0.845 - - - - - - - 0.845 - - epiregulin [Source:NCBI gene;Acc:408036]
12. DNAH3 ENSGALG00000002350 194 0.845 - - - - - - - 0.845 - - dynein axonemal heavy chain 3 [Source:HGNC Symbol;Acc:HGNC:2949]
13. GLB1L2 ENSGALG00000001604 4057 0.842 - - - - - - - 0.842 - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
14. TMEM82 16 0.84 - - - - - 0.840 - - - - transmembrane protein 82, transcript variant X2
15. ENSGALG00000006504 ENSGALG00000006504 3 0.834 - - - - - 0.834 - - - -
16. STEAP1 ENSGALG00000009006 16 0.834 - - - - - 0.834 - - - - STEAP family member 1
17. C21orf62 ENSGALG00000040059 5 0.834 - - - - - 0.834 - - - - chromosome 21 open reading frame 62 [Source:HGNC Symbol;Acc:HGNC:1305]
18. ENSGALG00000004619 ENSGALG00000004619 3 0.834 - - - - - 0.834 - - - -
19. NSUN7 ENSGALG00000014264 4 0.834 - - - - - 0.834 - - - - NOP2/Sun RNA methyltransferase family member 7 [Source:HGNC Symbol;Acc:HGNC:25857]
20. ENSGALG00000007846 ENSGALG00000007846 2 0.834 - - - - - 0.834 - - - -
21. SLC35F5 ENSGALG00000012166 25 0.834 - - - - - 0.834 - - - - solute carrier family 35 member F5 [Source:HGNC Symbol;Acc:HGNC:23617]
22. ADAMTS12 55 0.834 - - - - - 0.834 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
23. FTO ENSGALG00000041036 11 0.834 - - - - - 0.834 - - - - FTO, alpha-ketoglutarate dependent dioxygenase [Source:NCBI gene;Acc:415718]
24. SMOX ENSGALG00000015977 18 0.834 - - - - - 0.834 - - - - spermine oxidase [Source:HGNC Symbol;Acc:HGNC:15862]
25. PLCZ1 ENSGALG00000013123 3 0.834 - - - - - 0.834 - - - - phospholipase C zeta 1 [Source:NCBI gene;Acc:418182]
26. WARS2 ENSGALG00000014772 29 0.834 - - - - - 0.834 - - - - tryptophanyl tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:12730]
27. DOCK10 ENSGALG00000005030 848 0.833 - - - - - 0.833 - - - - dedicator of cytokinesis 10 [Source:HGNC Symbol;Acc:HGNC:23479]
28. C10orf118 C10orf118 762 0.833 - - - - - 0.833 - - - -
29. FKBP10 ENSGALG00000025764 7668 0.832 - - - - - - - 0.832 - - FK506 binding protein 10 [Source:HGNC Symbol;Acc:HGNC:18169]
30. KCNJ15 ENSGALG00000016055 66 0.831 - - - - - 0.831 - - - - potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]
31. CLOCK ENSGALG00000013793 9 0.83 - - - - - 0.830 - - - - clock circadian regulator [Source:NCBI gene;Acc:373991]
32. ENSGALG00000020283 ENSGALG00000020283 10 0.83 - - - - - 0.830 - - - -
33. SLC35B4 ENSGALG00000038187 320 0.829 - - - - - - - 0.829 - - solute carrier family 35 member B4 [Source:HGNC Symbol;Acc:HGNC:20584]
34. CYR61 ENSGALG00000008661 43 0.828 - - - - - 0.828 - - - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
35. DNAH5L ENSGALG00000013268 61 0.824 - - - - - 0.824 - - - - dynein axonemal heavy chain 5-like
36. DNAL1 ENSGALG00000028568 124 0.822 - - - - - 0.822 - - - - dynein axonemal light chain 1 [Source:NCBI gene;Acc:423246]
37. SNORA50 SNORA50 9 0.821 - - - - - 0.821 - - - -
38. TMEM248 ENSGALG00000033954 248 0.818 - - - - - - - 0.818 - - transmembrane protein 248 [Source:HGNC Symbol;Acc:HGNC:25476]
39. C4H4ORF29 C4H4ORF29 2442 0.818 - - - - - 0.818 - - - -
40. SARDH ENSGALG00000002855 798 0.817 - - - - - - - 0.817 - - sarcosine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:10536]
41. STK38 ENSGALG00000000523 44 0.817 - - - - - 0.817 - - - - serine/threonine kinase 38 [Source:HGNC Symbol;Acc:HGNC:17847]
42. IFT88 1241 0.817 - - - - - - - 0.817 - - intraflagellar transport 88, transcript variant X3
43. ADAM5P ENSGALG00000009606 31 0.816 - - - - - 0.816 - - - - ADAM metallopeptidase domain 5, pseudogene, transcript variant X5
44. FBXL4 ENSGALG00000015490 12 0.816 - - - - - 0.816 - - - - F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
45. PAPSS2 ENSGALG00000003689 278 0.816 - - - - - - - 0.816 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 2 [Source:HGNC Symbol;Acc:HGNC:8604]
46. DGKB ENSGALG00000033561 170 0.815 - - - - - 0.815 - - - - diacylglycerol kinase beta [Source:HGNC Symbol;Acc:HGNC:2850]
47. TMEM120A ENSGALG00000001975 2222 0.815 - - - - - - - 0.815 - - transmembrane protein 120A [Source:HGNC Symbol;Acc:HGNC:21697]
48. PC7 PC7 1105 0.814 - - - - - - - 0.814 - -
49. ZMYM3 ENSGALG00000005533 2927 0.813 - - - - - 0.813 - - - - zinc finger MYM-type containing 3 [Source:HGNC Symbol;Acc:HGNC:13054]
50. ENSGALG00000020779 ENSGALG00000020779 19 0.811 - - - - - 0.811 - - - -
51. PRKCB ENSGALG00000037943 29 0.81 - - - - - 0.810 - - - - protein kinase C beta [Source:HGNC Symbol;Acc:HGNC:9395]
52. SYNGR2 ENSGALG00000027902 6953 0.81 - - - - - - - 0.810 - - Gallus gallus synaptogyrin 2 (SYNGR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318453]
53. GLOD5 ENSGALG00000025991 17 0.807 - - - - - - - 0.807 - - glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
54. BSPRY ENSGALG00000008861 98 0.807 - - - - - 0.807 - - - - B-box and SPRY domain containing [Source:HGNC Symbol;Acc:HGNC:18232]
55. SMARCD3 ENSGALG00000043137 401 0.806 - - - - - - - 0.806 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:HGNC Symbol;Acc:HGNC:11108]
56. LGR5 ENSGALG00000010163 2931 0.806 - - - - - - - 0.806 - - leucine rich repeat containing G protein-coupled receptor 5 [Source:HGNC Symbol;Acc:HGNC:4504]
57. SELP 28 0.805 - - - - - - - 0.805 - - selectin P, transcript variant X9
58. LCORL ENSGALG00000014421 116 0.799 - - - - 0.799 - - - - - ligand dependent nuclear receptor corepressor like [Source:NCBI gene;Acc:422820]
59. CCDC126 ENSGALG00000010976 1892 0.798 - - - - - - - 0.798 - - coiled-coil domain containing 126 [Source:HGNC Symbol;Acc:HGNC:22398]
60. ZNF335 ENSGALG00000041370 4740 0.798 - - - - - - - 0.798 - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
61. GJB1 ENSGALG00000005541 261 0.796 - - - - - - - 0.796 - - gap junction protein beta 1 [Source:NCBI gene;Acc:378797]
62. GRHPR ENSGALG00000005423 1567 0.796 - - - - - - - 0.796 - - glyoxylate and hydroxypyruvate reductase [Source:HGNC Symbol;Acc:HGNC:4570]
63. PTK2B ENSGALG00000016564 406 0.795 - - - - - 0.795 - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
64. PIGG ENSGALG00000015349 314 0.795 - - - - - 0.795 - - - - phosphatidylinositol glycan anchor biosynthesis class G [Source:HGNC Symbol;Acc:HGNC:25985]
65. ABHD11 ENSGALG00000001056 1397 0.793 - - - - - - - 0.793 - - abhydrolase domain containing 11 [Source:HGNC Symbol;Acc:HGNC:16407]
66. SLCO2B1 ENSGALG00000017302 239 0.787 - - - - - 0.787 - - - - solute carrier organic anion transporter family member 2B1 [Source:HGNC Symbol;Acc:HGNC:10962]
67. LOC415478 ENSGALG00000021171 100 0.786 - - - - - - - 0.786 - - transmembrane protein 2-like, transcript variant X2
68. BAAT ENSGALG00000040619 579 0.785 - - - - - - - 0.785 - - bile acid-CoA:amino acid N-acyltransferase [Source:HGNC Symbol;Acc:HGNC:932]
69. UGT8L ENSGALG00000005599 93 0.783 - - - - - - - 0.783 - - UDP glycosyltransferase 8-like
70. ENSGALG00000016213 ENSGALG00000016213 33 0.783 - - - - - - - 0.783 - -
71. GP1BB ENSGALG00000021529 348 0.782 - - - - - 0.782 - - - - glycoprotein Ib platelet subunit beta [Source:HGNC Symbol;Acc:HGNC:4440]
72. FBXL18 ENSGALG00000004611 97 0.782 - - - - - - - 0.782 - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
73. KIAA0922 4430 0.78 - - - - - 0.780 - - - - KIAA0922, transcript variant X4
74. MAP9 ENSGALG00000020253 785 0.779 - - - - - 0.779 - - - - microtubule associated protein 9, transcript variant X7
75. ENSGALG00000001969 ENSGALG00000001969 19 0.778 - - - - - 0.778 - - - -
76. IGFBP4 ENSGALG00000040672 608 0.778 - - - - - - - 0.778 - - insulin like growth factor binding protein 4 [Source:NCBI gene;Acc:374271]
77. KRT222 ENSGALG00000003859 53 0.777 - - - - - 0.777 - - - - keratin 222 [Source:NCBI gene;Acc:420046]
78. MAT2A ENSGALG00000015366 17 0.777 - - - - - - - 0.777 - - methionine adenosyltransferase 2A, transcript variant X1
79. CSMD2 ENSGALG00000030229 716 0.776 - - - - - - - 0.776 - - CUB and Sushi multiple domains 2 [Source:HGNC Symbol;Acc:HGNC:19290]
80. RBP4 ENSGALG00000015374 122 0.776 - - - - - 0.776 - - - - retinol binding protein 4 [Source:NCBI gene;Acc:396454]
81. 7SK 7SK 631 0.775 - - 0.775 - - - - - - -
82. KIAA1671 ENSGALG00000005512 2540 0.775 - - - - - - - 0.775 - - KIAA1671 [Source:NCBI gene;Acc:768701]
83. PTPRJ ENSGALG00000006382 891 0.775 - - - - - - - 0.775 - - protein tyrosine phosphatase, receptor type J [Source:NCBI gene;Acc:395330]
84. SCLY ENSGALG00000030194 3025 0.775 - - - - - - - 0.775 - - selenocysteine lyase [Source:NCBI gene;Acc:424739]
85. FHL1 ENSGALG00000006190 22 0.774 - - - - - - - 0.774 - - four and a half LIM domains 1 [Source:HGNC Symbol;Acc:HGNC:3702]
86. TGM4 ENSGALG00000033171 19 0.774 - - - - - - - 0.774 - - transglutaminase 4 [Source:NCBI gene;Acc:420706]
87. PTDSS2 ENSGALG00000004300 682 0.774 - - - - - - - 0.774 - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
88. CYP3A4 ENSGALG00000004436 75 0.773 - - - - - - - 0.773 - - Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
89. TBC1D2B ENSGALG00000003322 54 0.771 - - - - - 0.771 - - - - TBC1 domain family member 2B [Source:HGNC Symbol;Acc:HGNC:29183]
90. ADAM17 ENSGALG00000016427 49 0.771 - - - - - - - 0.771 - - ADAM metallopeptidase domain 17 [Source:NCBI gene;Acc:421931]
91. LOX ENSGALG00000028063 1488 0.771 - - - - - - - 0.771 - - lysyl oxidase [Source:NCBI gene;Acc:396474]
92. POLR1A ENSGALG00000038160 236 0.771 - - - - - - - 0.771 - - RNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:17264]
93. MXRA8 ENSGALG00000001561 181 0.769 - - - - - - - 0.769 - - matrix remodeling associated 8 [Source:NCBI gene;Acc:395347]
94. METTL24 ENSGALG00000041120 60 0.768 - - - - - - - 0.768 - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
95. ACAA1 ENSGALG00000005860 1354 0.768 - - - - - - - 0.768 - - acetyl-CoA acyltransferase 1 [Source:NCBI gene;Acc:770094]
96. AVP ENSGALG00000014117 19 0.768 - - - - - - - 0.768 - - arginine vasopressin [Source:NCBI gene;Acc:396101]
97. ENSGALG00000026913 ENSGALG00000026913 12 0.768 - - - - - - - 0.768 - -
98. MIF4GD ENSGALG00000026715 41 0.767 - - - - - - - 0.767 - - MIF4G domain containing [Source:HGNC Symbol;Acc:HGNC:24030]
99. NOTCH2 ENSGALG00000002922 3272 0.766 - - - - - - - 0.766 - - notch 2 [Source:NCBI gene;Acc:374031]
100. SGTB ENSGALG00000014768 1065 0.766 - - - - - - - 0.766 - - small glutamine rich tetratricopeptide repeat containing beta [Source:NCBI gene;Acc:427166]

There are 121 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA