Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HPGDS

Gene Name Gene ID Reads Annotation
HPGDS ENSGALG00000010402 343 hematopoietic prostaglandin D synthase [Source:NCBI gene;Acc:395863]











Genes with expression patterns similar to HPGDS

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HPGDS ENSGALG00000010402 343 8 - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 hematopoietic prostaglandin D synthase [Source:NCBI gene;Acc:395863]
2. ACAN ENSGALG00000006725 184 3.073 - - - 0.745 0.702 0.854 - - - 0.772 aggrecan [Source:NCBI gene;Acc:395798]
3. C9H2ORF82 ENSGALG00000040264 4201 2.982 - - 0.701 0.743 - 0.835 0.703 - - - chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
4. COL8A1 ENSGALG00000015253 2505 2.949 - - - 0.754 0.751 - - - 0.725 0.719 collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
5. T ENSGALG00000011489 2619 2.948 - - 0.754 - 0.734 0.745 - - - 0.715 T brachyury transcription factor [Source:NCBI gene;Acc:395782]
6. LRRTM1 ENSGALG00000015967 85 2.44 - - 0.709 0.855 - - 0.876 - - - leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
7. SST ENSGALG00000007361 1383 2.301 - - 0.704 - 0.747 - - - - 0.850 somatostatin [Source:NCBI gene;Acc:396279]
8. NKX2-5 ENSGALG00000002886 81 1.75 - - - 0.750 - - 1.000 - - - NK2 homeobox 5 [Source:NCBI gene;Acc:396073]
9. OSBPL3 ENSGALG00000011007 23 1.689 - - - 0.760 - - 0.929 - - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
10. COL11A1 ENSGALG00000005180 244 1.65 - - - 0.872 - - - - - 0.778 collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]
11. COL9A3 ENSGALG00000005628 2842 1.601 - - 0.725 - - 0.876 - - - - collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
12. SAMD3 ENSGALG00000032409 459 1.527 - - - 0.769 - - - - - 0.758 sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
13. COL4A1 ENSGALG00000036798 12749 1.522 - - - - - - - - 0.789 0.733 collagen type IV alpha 1 chain [Source:NCBI gene;Acc:395530]
14. TAC1 ENSGALG00000009737 2211 1.518 - - 0.732 - - 0.786 - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
15. LECT1 LECT1 12694 1.511 - - 0.720 - - - - - - 0.791
16. SPON2 ENSGALG00000038433 1240 1.51 - - - - - - 0.714 - - 0.796 spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
17. B3GNT7 ENSGALG00000007701 929 1.487 - - - - - 0.747 - - 0.740 - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
18. SRL ENSGALG00000038884 19 1.473 - - - 0.763 - - - - - 0.710 sarcalumenin [Source:NCBI gene;Acc:396269]
19. UPK3A ENSGALG00000014227 7 1 - - - - - 1.000 - - - - uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
20. NEGR1 ENSGALG00000011350 6 1 - - - - - 1.000 - - - - neuronal growth regulator 1 [Source:NCBI gene;Acc:395662]
21. TTC9 ENSGALG00000017652 16 1 - - - - - - 1.000 - - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
22. AGO2 ENSGALG00000040957 25 1 - - - - - 1.000 - - - - argonaute 2, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3263]
23. IL8 ENSGALG00000026098 16 1 - - - - - 1.000 - - - - interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
24. PLEKHG7 ENSGALG00000011277 3 1 - - - - - 1.000 - - - - pleckstrin homology and RhoGEF domain containing G7 [Source:HGNC Symbol;Acc:HGNC:33829]
25. ENSGALG00000009041 ENSGALG00000009041 27 1 - - - - - 1.000 - - - -
26. gga-mir-22 ENSGALG00000024507 2 1 - - - - - 1.000 - - - - gga-mir-22 [Source:miRBase;Acc:MI0006982]
27. LZTS3 ENSGALG00000016001 3 1 - - - - - 1.000 - - - - leucine zipper tumor suppressor family member 3 [Source:HGNC Symbol;Acc:HGNC:30139]
28. EVI2A ENSGALG00000039084 13 1 - - - - - 1.000 - - - - ecotropic viral integration site 2A [Source:NCBI gene;Acc:776037]
29. PLXNB1 23 1 - - - - - - 1.000 - - - plexin B1, transcript variant X2
30. ENSGALG00000020661 ENSGALG00000020661 1 1 - - - - - 1.000 - - - -
31. KCNH4 ENSGALG00000003354 0 1 - - - - - 1.000 - - - - potassium voltage-gated channel subfamily H member 4 [Source:HGNC Symbol;Acc:HGNC:6253]
32. CYP2J19 ENSGALG00000011413 22 1 - - - - - - 1.000 - - - cytochrome P450, family 2, subfamily J, polypeptide 19
33. FEM1B ENSGALG00000028906 4 1 - - - - - 1.000 - - - - fem-1 homolog B [Source:NCBI gene;Acc:415559]
34. SNX18 ENSGALG00000014914 7 1 - - - - - - 1.000 - - - sorting nexin 18 [Source:HGNC Symbol;Acc:HGNC:19245]
35. ENSGALG00000028239 ENSGALG00000028239 0 1 - - - - - 1.000 - - - -
36. DHX58 ENSGALG00000023821 15 1 - - - - - 1.000 - - - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
37. MCT2L ENSGALG00000007596 127 1 - - - - - 1.000 - - - - monocarboxylate transporter 2-like, transcript variant X5
38. WFIKKN2 ENSGALG00000007367 9 1 - - - - - - 1.000 - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30916]
39. TMEM150A ENSGALG00000005649 1 1 - - - - - 1.000 - - - - transmembrane protein 150A
40. EPHA8 ENSGALG00000021567 3 1 - - - - - 1.000 - - - - EPH receptor A8 [Source:HGNC Symbol;Acc:HGNC:3391]
41. LRCH1 ENSGALG00000016990 17 1 - - - - - 1.000 - - - - leucine rich repeats and calponin homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20309]
42. AK5 ENSGALG00000031652 12 1 - - - - - 1.000 - - - - adenylate kinase 5 [Source:HGNC Symbol;Acc:HGNC:365]
43. ASIP ENSGALG00000039101 29 1 - - - - - 1.000 - - - - agouti signaling protein [Source:NCBI gene;Acc:419147]
44. ENSGALG00000000865 ENSGALG00000000865 46 1 - - - - - - 1.000 - - -
45. FGF23 ENSGALG00000027791 9 1 - - - - - 1.000 - - - - fibroblast growth factor 23 [Source:HGNC Symbol;Acc:HGNC:3680]
46. LEPR ENSGALG00000011058 4 1 - - - - - 1.000 - - - - leptin receptor [Source:NCBI gene;Acc:374223]
47. CHADL ENSGALG00000011970 42 1 - - - - - - 1.000 - - - chondroadherin-like [Source:NCBI gene;Acc:417998]
48. SLC13A5 ENSGALG00000005995 23 1 - - - - - 1.000 - - - - solute carrier family 13 member 5 [Source:HGNC Symbol;Acc:HGNC:23089]
49. PKD1 ENSGALG00000005714 0 1 - - - - - 1.000 - - - - polycystin 1, transient receptor potential channel interacting [Source:HGNC Symbol;Acc:HGNC:9008]
50. ARHGAP44 ENSGALG00000001311 0 1 - - - - - 1.000 - - - - Rho GTPase activating protein 44, transcript variant X4
51. KIAA1841 ENSGALG00000007825 22 1 - - - - - 1.000 - - - - KIAA1841 [Source:NCBI gene;Acc:421196]
52. NFIL3 ENSGALG00000015209 15 1 - - - - - 1.000 - - - - nuclear factor, interleukin 3 regulated [Source:NCBI gene;Acc:395326]
53. HHATL ENSGALG00000005297 0 1 - - - - - 1.000 - - - - hedgehog acyltransferase-like [Source:NCBI gene;Acc:420391]
54. NLRC3 ENSGALG00000033278 11 1 - - - - - 1.000 - - - - NLR family CARD domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29889]
55. ZNF362 ENSGALG00000026558 11 1 - - - - - - 1.000 - - - zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079]
56. GPR174 ENSGALG00000004111 16 1 - - - - - 1.000 - - - - G protein-coupled receptor 174 [Source:NCBI gene;Acc:422146]
57. ENSGALG00000004753 ENSGALG00000004753 63 1 - - - - - 1.000 - - - -
58. U5 U5 1 1 - - - - - 1.000 - - - -
59. DD1 DD1 4 1 - - - - - 1.000 - - - -
60. ENSGALG00000025736 ENSGALG00000025736 3 1 - - - - - 1.000 - - - -
61. CALR3 ENSGALG00000003914 8 1 - - - - - 1.000 - - - - calreticulin 3 [Source:HGNC Symbol;Acc:HGNC:20407]
62. UNC13B ENSGALG00000002165 3 1 - - - - - 1.000 - - - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
63. PABPC1L ENSGALG00000004123 2 1 - - - - - 1.000 - - - - poly(A) binding protein cytoplasmic 1 like [Source:HGNC Symbol;Acc:HGNC:15797]
64. DRD2 ENSGALG00000007794 399 1 - - - - - - 1.000 - - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
65. NRAP ENSGALG00000008914 24 1 - - - - - 1.000 - - - - nebulin related anchoring protein [Source:HGNC Symbol;Acc:HGNC:7988]
66. CALB1 ENSGALG00000032282 16 0.984 - - - - - - 0.984 - - - calbindin 1 [Source:NCBI gene;Acc:396519]
67. SLC6A2 ENSGALG00000003560 108 0.983 - - - - - 0.983 - - - - solute carrier family 6 member 2 [Source:NCBI gene;Acc:395458]
68. KIAA0319 ENSGALG00000041273 10 0.963 - - - - - 0.963 - - - - KIAA0319 [Source:HGNC Symbol;Acc:HGNC:21580]
69. CHOBF-1 CHOBF-1 41 0.958 - - - - - - 0.958 - - -
70. VPAC2 VPAC2 45 0.953 - - - 0.953 - - - - - -
71. TAMM41 ENSGALG00000004940 2 0.953 - - - 0.953 - - - - - - TAM41 mitochondrial translocator assembly and maintenance homolog [Source:HGNC Symbol;Acc:HGNC:25187]
72. CRYGS ENSGALG00000006574 9 0.953 - - - 0.953 - - - - - - crystallin gamma S [Source:NCBI gene;Acc:429134]
73. ZSWIM6 ENSGALG00000014734 7 0.953 - - - 0.953 - - - - - - zinc finger SWIM-type containing 6, transcript variant X2
74. SUFU ENSGALG00000008096 307 0.953 - - - 0.953 - - - - - - SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
75. THSD4 ENSGALG00000004087 12 0.953 - - - 0.953 - - - - - - thrombospondin type 1 domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25835]
76. ELF5 ENSGALG00000035867 6 0.953 - - - 0.953 - - - - - - E74 like ETS transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:3320]
77. SV2C ENSGALG00000014967 7 0.953 - - - 0.953 - - - - - - synaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:HGNC:30670]
78. ENSGALG00000021859 ENSGALG00000021859 2 0.953 - - - 0.953 - - - - - -
79. KCNJ16 ENSGALG00000004373 6 0.953 - - - 0.953 - - - - - - potassium voltage-gated channel subfamily J member 16 [Source:HGNC Symbol;Acc:HGNC:6262]
80. PTCH2 ENSGALG00000010133 16 0.953 - - - 0.953 - - - - - - patched 2 [Source:HGNC Symbol;Acc:HGNC:9586]
81. COL15A1 ENSGALG00000034119 9 0.953 - - - 0.953 - - - - - - collagen type XV alpha 1 chain, transcript variant X6
82. C1ORF146 C1ORF146 2 0.953 - - - 0.953 - - - - - -
83. ENSGALG00000023271 ENSGALG00000023271 3 0.953 - - - 0.953 - - - - - -
84. VWA1 ENSGALG00000001527 79 0.948 - - - - - - 0.948 - - - von Willebrand factor A domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30910]
85. LRRC55 ENSGALG00000029130 21 0.939 - - - - - 0.939 - - - - leucine rich repeat containing 55 [Source:HGNC Symbol;Acc:HGNC:32324]
86. YES1 ENSGALG00000014860 31 0.934 - - - - - - 0.934 - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:NCBI gene;Acc:396238]
87. MYL2_1 ENSGALG00000004582 2367 0.927 - - - - - 0.927 - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
88. BDKRB2 ENSGALG00000011080 12 0.923 - - - - - 0.923 - - - - bradykinin receptor B2 [Source:NCBI gene;Acc:428906]
89. ANKRD34B ENSGALG00000044727 9 0.918 - - - 0.918 - - - - - - ankyrin repeat domain 34B [Source:HGNC Symbol;Acc:HGNC:33736]
90. KIAA0319L ENSGALG00000002445 75 0.917 - - - - - - 0.917 - - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
91. SCN5A ENSGALG00000006112 137 0.917 - - - - - - 0.917 - - - Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]
92. DACT2 ENSGALG00000011288 358 0.907 - - - - - 0.907 - - - - dishevelled binding antagonist of beta catenin 2 [Source:HGNC Symbol;Acc:HGNC:21231]
93. SLC29A4 ENSGALG00000010497 43 0.906 - - - 0.906 - - - - - - solute carrier family 29 member 4 [Source:HGNC Symbol;Acc:HGNC:23097]
94. ENSGALG00000006213 ENSGALG00000006213 7 0.906 - - - 0.906 - - - - - -
95. HCLS1 ENSGALG00000039682 34 0.899 - - - - - 0.899 - - - - hematopoietic cell-specific Lyn substrate 1 [Source:NCBI gene;Acc:426867]
96. ADPGK ENSGALG00000001788 208 0.896 - - - - - 0.896 - - - - ADP dependent glucokinase [Source:NCBI gene;Acc:415317]
97. ENSGALG00000018733 ENSGALG00000018733 175 0.896 - - - - - 0.896 - - - -
98. ENSGALG00000019202 ENSGALG00000019202 9 0.896 - - - - - 0.896 - - - -
99. RAB3IL1 ENSGALG00000007203 23 0.892 - - - - - 0.892 - - - - RAB3A interacting protein like 1 [Source:NCBI gene;Acc:423123]
100. CA5B ENSGALG00000005855 172 0.892 - - - - - 0.892 - - - - carbonic anhydrase 5B [Source:HGNC Symbol;Acc:HGNC:1378]

There are 167 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA