Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HPD

Gene Name Gene ID Reads Annotation
HPD ENSGALG00000004343 244 4-hydroxyphenylpyruvate dioxygenase [Source:NCBI gene;Acc:416852]











Genes with expression patterns similar to HPD

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HPD ENSGALG00000004343 244 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 4-hydroxyphenylpyruvate dioxygenase [Source:NCBI gene;Acc:416852]
2. LCAT ENSGALG00000028928 484 1.855 - - - 0.897 - - - - - 0.958 lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
3. TJP3 ENSGALG00000000748 45 1.763 - - - 0.836 - - - - - 0.927 tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
4. ENSGALG00000018733 ENSGALG00000018733 175 1.68 - - - 0.835 - - - - - 0.845
5. TMEM206 ENSGALG00000009822 80 1.625 - - - 0.746 - - - - - 0.879 transmembrane protein 206 [Source:HGNC Symbol;Acc:HGNC:25593]
6. ST6GALNAC3 ENSGALG00000009027 17 0.969 - - - - - - - - - 0.969 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:19343]
7. SLC12A8 ENSGALG00000012045 39 0.956 - - - - - - - - - 0.956 solute carrier family 12 member 8 [Source:HGNC Symbol;Acc:HGNC:15595]
8. WDR72 ENSGALG00000004545 5 0.956 - - - - - - - - - 0.956 WD repeat domain 72 [Source:HGNC Symbol;Acc:HGNC:26790]
9. PPM1H ENSGALG00000009805 3 0.955 - - - - - - - - - 0.955 protein phosphatase, Mg2+/Mn2+ dependent 1H [Source:HGNC Symbol;Acc:HGNC:18583]
10. ATP6V0E1 10 0.955 - - - - - - - - - 0.955 ATPase H+ transporting V0 subunit e1
11. ENSGALG00000026657 ENSGALG00000026657 4 0.955 - - - - - - - - - 0.955
12. ENSGALG00000016213 ENSGALG00000016213 33 0.955 - - - - - - - - - 0.955
13. HOXD11 ENSGALG00000039629 658 0.955 - - - - - - - - - 0.955 homeobox D11 [Source:NCBI gene;Acc:395328]
14. AGO2 ENSGALG00000040957 25 0.955 - - - - - - - - - 0.955 argonaute 2, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3263]
15. KNG1 ENSGALG00000046159 17 0.955 - - - 0.955 - - - - - - kininogen 1 [Source:HGNC Symbol;Acc:HGNC:6383]
16. CYP2H1 CYP2H1 363 0.955 - - - - - - - - - 0.955
17. DLX3 ENSGALG00000040529 37 0.95 - - - - - - - - - 0.950 Gallus gallus distal-less homeobox 3 (DLX3), mRNA. [Source:RefSeq mRNA;Acc:NM_204804]
18. RPUSD2 ENSGALG00000041216 9 0.948 - - - - - - - - - 0.948 RNA pseudouridylate synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]
19. KYNU ENSGALG00000012418 353 0.948 - - - - - - - - - 0.948 kynureninase, transcript variant X3
20. HGF/SF HGF/SF 345 0.941 - - - - - - - - - 0.941
21. C11H16ORF70 C11H16ORF70 7 0.937 - - - - - - - - - 0.937
22. AGRP ENSGALG00000002244 27 0.934 - - - - - - - - - 0.934 agouti related neuropeptide [Source:NCBI gene;Acc:427535]
23. NEIL3 ENSGALG00000010719 47 0.934 - - - - - - - - - 0.934 nei like DNA glycosylase 3 [Source:HGNC Symbol;Acc:HGNC:24573]
24. JAKMIP1 ENSGALG00000015528 11 0.933 - - - - - - - - - 0.933 janus kinase and microtubule interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26460]
25. ADORA2B ENSGALG00000014182 26 0.93 - - - - - - - - - 0.930 adenosine A2b receptor [Source:NCBI gene;Acc:395971]
26. ACSS1 ENSGALG00000008632 397 0.929 - - - - - - - - - 0.929 acyl-CoA synthetase short chain family member 1 [Source:HGNC Symbol;Acc:HGNC:16091]
27. WDR41 ENSGALG00000004350 16 0.929 - - - - - - - - - 0.929 WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
28. UROC1 ENSGALG00000006306 75 0.925 - - - - - - - - - 0.925 urocanate hydratase 1 [Source:HGNC Symbol;Acc:HGNC:26444]
29. LOC112532477 ENSGALG00000027520 40 0.925 - - - - - - - - - 0.925 fibrinogen-like protein 1-like protein
30. CYP3A4 ENSGALG00000004436 75 0.919 - - - 0.919 - - - - - - Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
31. CNST ENSGALG00000010649 18 0.919 - - - - - - - - - 0.919 consortin, connexin sorting protein [Source:HGNC Symbol;Acc:HGNC:26486]
32. TPP1 52 0.919 - - - - - - - - - 0.919 tripeptidyl peptidase 1
33. ENSGALG00000027621 ENSGALG00000027621 863 0.908 - - - 0.908 - - - - - -
34. UIMC1 ENSGALG00000001158 22 0.905 - - - - - - - - - 0.905 ubiquitin interaction motif containing 1 [Source:HGNC Symbol;Acc:HGNC:30298]
35. ENSGALG00000012250 ENSGALG00000012250 581 0.902 - - - - - - - - - 0.902
36. TNIP2 ENSGALG00000015666 28 0.902 - - - - - - - - - 0.902 TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
37. SERPINC1 ENSGALG00000004591 68 0.9 - - - 0.900 - - - - - - Gallus gallus serpin family C member 1 (SERPINC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001353945]
38. TMEM9 ENSGALG00000000226 635 0.897 - - - - - - - - - 0.897 transmembrane protein 9 [Source:HGNC Symbol;Acc:HGNC:18823]
39. FGA ENSGALG00000009266 291 0.896 - - - 0.896 - - - - - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
40. FAM13A ENSGALG00000010371 19 0.894 - - - - - - - - - 0.894 family with sequence similarity 13 member A [Source:HGNC Symbol;Acc:HGNC:19367]
41. ENSGALG00000016141 ENSGALG00000016141 10 0.888 - - - - - - - - - 0.888
42. APOB ENSGALG00000016491 34 0.886 - - - 0.886 - - - - - - apolipoprotein B [Source:NCBI gene;Acc:396535]
43. INPP5B ENSGALG00000001606 458 0.882 - - - 0.882 - - - - - - inositol polyphosphate-5-phosphatase B [Source:HGNC Symbol;Acc:HGNC:6077]
44. ENTPD7 ENSGALG00000023691 46 0.881 - - - - - - - - - 0.881 ectonucleoside triphosphate diphosphohydrolase 7 [Source:HGNC Symbol;Acc:HGNC:19745]
45. ARV1 ENSGALG00000011155 38 0.879 - - - - - - - - - 0.879 ARV1 homolog, fatty acid homeostasis modulator [Source:HGNC Symbol;Acc:HGNC:29561]
46. PROX1 ENSGALG00000009791 1184 0.878 - - - 0.878 - - - - - - prospero homeobox 1 [Source:NCBI gene;Acc:395802]
47. TBC1D8B ENSGALG00000009040 75 0.877 - - - - - - - - - 0.877 TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
48. CACNB2 ENSGALG00000008591 53 0.871 - - - - - - - - - 0.871 calcium voltage-gated channel auxiliary subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:1402]
49. ENSGALG00000005445 ENSGALG00000005445 16 0.868 - - - - - - - - - 0.868
50. CL2 ENSGALG00000011455 87 0.867 - - - 0.867 - - - - - - liver ribonuclease A [Source:NCBI gene;Acc:422633]
51. MMACHC ENSGALG00000010234 77 0.867 - - - - - - - - - 0.867 methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:NCBI gene;Acc:424597]
52. DISP3 ENSGALG00000004662 146 0.867 - - - - - - - - - 0.867 dispatched RND transporter family member 3 [Source:NCBI gene;Acc:419497]
53. TMEFF2 ENSGALG00000007759 93 0.864 - - - 0.864 - - - - - - transmembrane protein with EGF like and two follistatin like domains 2 [Source:HGNC Symbol;Acc:HGNC:11867]
54. SLC6A2 ENSGALG00000003560 108 0.862 - - - - - - - - - 0.862 solute carrier family 6 member 2 [Source:NCBI gene;Acc:395458]
55. DDAH1 ENSGALG00000008663 8 0.857 - - - 0.857 - - - - - - dimethylarginine dimethylaminohydrolase 1 [Source:NCBI gene;Acc:378898]
56. SLC18A2 ENSGALG00000009289 11 0.857 - - - 0.857 - - - - - - solute carrier family 18 member A2 [Source:HGNC Symbol;Acc:HGNC:10935]
57. PNMT ENSGALG00000027281 14 0.857 - - - 0.857 - - - - - - phenylethanolamine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:9160]
58. CRLF2 ENSGALG00000045814 7 0.857 - - - 0.857 - - - - - - cytokine receptor-like factor 2
59. GPC6 ENSGALG00000016900 13 0.856 - - - - - - - - - 0.856 glypican 6 [Source:HGNC Symbol;Acc:HGNC:4454]
60. ENSGALG00000004050 ENSGALG00000004050 9 0.854 - - - 0.854 - - - - - -
61. WNT5B ENSGALG00000012998 35 0.854 - - - - - - - - - 0.854 Wnt family member 5B [Source:NCBI gene;Acc:418154]
62. MTHFD2L ENSGALG00000010855 14 0.854 - - - 0.854 - - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:HGNC Symbol;Acc:HGNC:31865]
63. SNORA19 SNORA19 70 0.853 - - - 0.853 - - - - - -
64. ENSGALG00000023485 ENSGALG00000023485 46 0.849 - - - 0.849 - - - - - -
65. NTS ENSGALG00000027192 669 0.849 - - - 0.849 - - - - - - neurotensin [Source:NCBI gene;Acc:417883]
66. BACE2 ENSGALG00000034932 1570 0.849 - - - 0.849 - - - - - - beta-secretase 2 [Source:HGNC Symbol;Acc:HGNC:934]
67. CLDN12 ENSGALG00000009038 16 0.848 - - - 0.848 - - - - - - claudin 12 [Source:HGNC Symbol;Acc:HGNC:2034]
68. XYLB ENSGALG00000006173 23 0.847 - - - 0.847 - - - - - - xylulokinase [Source:HGNC Symbol;Acc:HGNC:12839]
69. LRRK1 LRRK1 35 0.845 - - - 0.845 - - - - - -
70. BEND4 2292 0.845 - - - 0.845 - - - - - - BEN domain containing 4, transcript variant X1
71. DEF6 ENSGALG00000002615 1038 0.843 - - - - - - - - - 0.843 DEF6, guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:2760]
72. MASP1 ENSGALG00000007419 141 0.84 - - - 0.840 - - - - - - mannan binding lectin serine peptidase 1 [Source:NCBI gene;Acc:407088]
73. ANKH ENSGALG00000012964 273 0.84 - - - 0.840 - - - - - - ANKH inorganic pyrophosphate transport regulator [Source:NCBI gene;Acc:420917]
74. UGT1A1 ENSGALG00000004196 30 0.84 - - - 0.840 - - - - - - UDP glucuronosyltransferase family 1 member A1, transcript variant X1
75. A1CF ENSGALG00000003765 36 0.838 - - - 0.838 - - - - - - APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
76. TMEM82 16 0.833 - - - 0.833 - - - - - - transmembrane protein 82, transcript variant X2
77. SIGIRR ENSGALG00000004267 72 0.832 - - - 0.832 - - - - - - single Ig and TIR domain containing [Source:NCBI gene;Acc:422995]
78. RRAD ENSGALG00000005140 183 0.83 - - - 0.830 - - - - - - RRAD, Ras related glycolysis inhibitor and calcium channel regulator [Source:NCBI gene;Acc:415790]
79. LRRC8C ENSGALG00000006170 43 0.83 - - - - - - - - - 0.830 leucine rich repeat containing 8 VRAC subunit C [Source:HGNC Symbol;Acc:HGNC:25075]
80. MANBA ENSGALG00000012308 84 0.825 - - - 0.825 - - - - - - mannosidase beta [Source:HGNC Symbol;Acc:HGNC:6831]
81. TMEM161B ENSGALG00000010896 36 0.825 - - - 0.825 - - - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
82. ZFAND3 ENSGALG00000010134 34 0.824 - - - - - - - - - 0.824 zinc finger AN1-type containing 3 [Source:HGNC Symbol;Acc:HGNC:18019]
83. FAM109A 6 0.823 - - - - - - 0.823 - - - family with sequence similarity 109 member A
84. TMEM196 ENSGALG00000010865 239 0.823 - - - 0.823 - - - - - - transmembrane protein 196 [Source:HGNC Symbol;Acc:HGNC:22431]
85. TUFT1 ENSGALG00000032955 1317 0.82 - - - 0.820 - - - - - - tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]
86. MGAT4D ENSGALG00000009830 23 0.82 - - - 0.820 - - - - - - MGAT4 family member D [Source:HGNC Symbol;Acc:HGNC:43619]
87. MFSD9 ENSGALG00000016792 40 0.819 - - - - - - - - - 0.819 major facilitator superfamily domain containing 9 [Source:HGNC Symbol;Acc:HGNC:28158]
88. SCNN1A ENSGALG00000040424 61 0.819 - - - 0.819 - - - - - - sodium channel epithelial 1 alpha subunit [Source:NCBI gene;Acc:396050]
89. MALL ENSGALG00000023882 241 0.818 - - - 0.818 - - - - - - mal, T-cell differentiation protein like [Source:NCBI gene;Acc:421222]
90. CPM ENSGALG00000009945 140 0.816 - - - 0.816 - - - - - - carboxypeptidase M [Source:NCBI gene;Acc:417843]
91. MAPK1 ENSGALG00000001501 34 0.815 - - - - - - - - - 0.815 mitogen-activated protein kinase 1 [Source:NCBI gene;Acc:373953]
92. BMP-10 BMP-10 22 0.814 - - - 0.814 - - - - - -
93. NXPH2 ENSGALG00000029083 353 0.813 - - - 0.813 - - - - - - neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
94. ENSGALG00000028778 ENSGALG00000028778 47 0.807 - - - 0.807 - - - - - -
95. RIPK2 ENSGALG00000043535 671 0.806 - - - - - - - - - 0.806 receptor interacting serine/threonine kinase 2 [Source:NCBI gene;Acc:420215]
96. COL24A1 ENSGALG00000006864 161 0.805 - - - - - - - - - 0.805 collagen type XXIV alpha 1 chain, transcript variant X4
97. TFB1M ENSGALG00000013647 84 0.804 - - - - - - - - - 0.804 transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17037]
98. KBTBD8 ENSGALG00000007569 20 0.804 - - - 0.804 - - - - - - kelch repeat and BTB domain containing 8 [Source:HGNC Symbol;Acc:HGNC:30691]
99. AHNAK2 58 0.803 - - - 0.803 - - - - - - AHNAK nucleoprotein 2, transcript variant X2
100. RLIM ENSGALG00000007750 447 0.803 - - - - - - - - - 0.803 ring finger protein, LIM domain interacting [Source:NCBI gene;Acc:395630]

There are 123 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA