Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HPCAL1

Gene Name Gene ID Reads Annotation
HPCAL1 ENSGALG00000016443 6633 hippocalcin like 1 [Source:NCBI gene;Acc:396161]











Genes with expression patterns similar to HPCAL1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HPCAL1 ENSGALG00000016443 6633 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 hippocalcin like 1 [Source:NCBI gene;Acc:396161]
2. TCF15 ENSGALG00000026276 3646 2.374 - - 0.815 - - 0.802 0.757 - - - transcription factor 15 [Source:NCBI gene;Acc:395788]
3. EN1 ENSGALG00000042389 3051 2.24 - - 0.790 - 0.709 0.741 - - - - engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
4. RGMA ENSGALG00000039173 12874 1.728 - - 0.909 - - 0.819 - - - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
5. UBE2D1 ENSGALG00000021213 5876 1.652 - - - - - - 0.714 0.938 - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
6. TMEM57 ENSGALG00000001067 3367 1.642 - - - - - - 0.776 0.866 - - transmembrane protein 57 [Source:NCBI gene;Acc:419590]
7. MED24 ENSGALG00000013506 5403 1.635 - - - - - - 0.712 0.923 - - mediator complex subunit 24 [Source:NCBI gene;Acc:426134]
8. RNF214 ENSGALG00000036993 3729 1.611 - - - - - - 0.722 0.889 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
9. GPM6A ENSGALG00000043480 2133 1.601 - - 0.818 - - 0.783 - - - - glycoprotein M6A [Source:NCBI gene;Acc:422569]
10. ATG4C ENSGALG00000010985 6102 1.575 - - - - - - 0.704 0.871 - - autophagy related 4C cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:16040]
11. RUVBL1 ENSGALG00000005931 9379 1.557 - - - - - - 0.724 0.833 - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
12. MRPL20 ENSGALG00000001542 28764 1.553 - - - - - - 0.712 0.841 - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
13. GRM3 ENSGALG00000006576 474 1.543 - - - - - 0.760 - - - 0.783 glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
14. EF1A EF1A 2378 1.523 - - - - - - - - 0.717 0.806
15. NTN3 ENSGALG00000029072 1368 1.522 - - 0.731 - - 0.791 - - - - netrin 1 [Source:NCBI gene;Acc:396387]
16. RNPS1 ENSGALG00000009288 13588 1.512 - - - - - - 0.808 0.704 - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
17. TNNI1 ENSGALG00000000313 4069 1.498 - - 0.763 - - 0.735 - - - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
18. MYT1 ENSGALG00000005932 2017 1.496 - - 0.707 - - - - - - 0.789 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
19. MYF5 ENSGALG00000028091 1965 1.475 - - 0.758 - - 0.717 - - - - myogenic factor 5 [Source:NCBI gene;Acc:395633]
20. NKX-6.2 NKX-6.2 1370 1.467 - - - - - 0.736 - - 0.731 -
21. MYL2_1 ENSGALG00000004582 2367 1.441 - - 0.731 - 0.710 - - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
22. GGMOXR1 GGMOXR1 6734 1.44 - - 0.725 - - - 0.715 - - -
23. ID1 ENSGALG00000034661 44524 1.429 - - - - - 0.721 0.708 - - - inhibitor of DNA binding 1, HLH protein [Source:NCBI gene;Acc:395282]
24. GAP43 ENSGALG00000015089 505 1.419 - - - - - - - - 0.713 0.706 growth associated protein 43 [Source:NCBI gene;Acc:427955]
25. DPYD ENSGALG00000005509 4115 0.949 - - - - - - - 0.949 - - dihydropyrimidine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3012]
26. SNAP29 ENSGALG00000040128 3581 0.939 - - - - - - - 0.939 - - synaptosome associated protein 29 [Source:NCBI gene;Acc:416766]
27. CKAP2 ENSGALG00000017025 25020 0.929 - - - - - - - 0.929 - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
28. MRPL18 ENSGALG00000011625 7855 0.929 - - - - - - - 0.929 - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
29. SMDT1 ENSGALG00000011897 9360 0.928 - - - - - - - 0.928 - - single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
30. MAPK9 ENSGALG00000039099 5467 0.926 - - - - - - - 0.926 - - mitogen-activated protein kinase 9 [Source:NCBI gene;Acc:395983]
31. GLG1 ENSGALG00000039818 6221 0.926 - - - - - - - 0.926 - - golgi glycoprotein 1 [Source:NCBI gene;Acc:396492]
32. CHMP3 ENSGALG00000015805 11581 0.923 - - - - - - - 0.923 - - charged multivesicular body protein 3
33. LIG3 ENSGALG00000002288 7198 0.922 - - - - - - - 0.922 - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
34. MRPS23 ENSGALG00000005559 10360 0.919 - - - - - - - 0.919 - - mitochondrial ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:14509]
35. MAST2 ENSGALG00000010313 2975 0.918 - - - - - - - 0.918 - - microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:19035]
36. KDM4A ENSGALG00000010074 7219 0.917 - - - - - - - 0.917 - - lysine demethylase 4A
37. CHMP6 ENSGALG00000026428 18026 0.917 - - - - - - - 0.917 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
38. LATS2 4776 0.917 - - - - - - - 0.917 - - large tumor suppressor kinase 2
39. XPO6 ENSGALG00000035360 7042 0.917 - - - - - - - 0.917 - - exportin 6 [Source:HGNC Symbol;Acc:HGNC:19733]
40. ENSGALG00000003150 ENSGALG00000003150 10001 0.916 - - - - - - - 0.916 - -
41. FBXO33 ENSGALG00000010192 2917 0.915 - - - - - - - 0.915 - - F-box protein 33 [Source:HGNC Symbol;Acc:HGNC:19833]
42. CENPH ENSGALG00000014788 10601 0.914 - - - - - - - 0.914 - - centromere protein H [Source:NCBI gene;Acc:395316]
43. SRP72 ENSGALG00000011403 13666 0.913 - - - - - - - 0.913 - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
44. NDUFB3 ENSGALG00000008239 15511 0.913 - - - - - - - 0.913 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
45. AHCTF1 ENSGALG00000010630 4809 0.913 - - - - - - - 0.913 - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
46. ERGIC2 ENSGALG00000007183 12870 0.912 - - - - - - - 0.912 - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
47. SCO1 ENSGALG00000030475 7304 0.912 - - - - - - - 0.912 - - SCO1, cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:HGNC:10603]
48. TXNDC5 ENSGALG00000012784 4678 0.912 - - - - - - - 0.912 - - thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
49. ZNF326 ENSGALG00000006113 15141 0.911 - - - - - - - 0.911 - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
50. TCEA1 ENSGALG00000015274 2706 0.911 - - - - - - - 0.911 - - transcription elongation factor A1 [Source:NCBI gene;Acc:421119]
51. SMIM12 ENSGALG00000030261 5860 0.91 - - - - - - - 0.910 - - small integral membrane protein 12 [Source:NCBI gene;Acc:100858028]
52. PIGK ENSGALG00000009015 7942 0.909 - - - - - - - 0.909 - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
53. PEO1 PEO1 6747 0.907 - - - - - - - 0.907 - -
54. TSC22D2 ENSGALG00000027591 6594 0.907 - - - - - - - 0.907 - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
55. BAG3 ENSGALG00000009433 6152 0.907 - - - - - - - 0.907 - - BCL2 associated athanogene 3 [Source:HGNC Symbol;Acc:HGNC:939]
56. MBD3 ENSGALG00000001101 37265 0.906 - - - - - - - 0.906 - - methyl-CpG binding domain protein 3 [Source:NCBI gene;Acc:770153]
57. MTERFD1 MTERFD1 3640 0.904 - - - - - - - 0.904 - -
58. SLC25A1 ENSGALG00000041760 4744 0.903 - - - - - - - 0.903 - - solute carrier family 25 member 1, transcript variant X2
59. ECHS1 ENSGALG00000024271 9364 0.903 - - - - - - - 0.903 - - enoyl-CoA hydratase, short chain 1 [Source:NCBI gene;Acc:770828]
60. CDC42BPA ENSGALG00000009158 3926 0.903 - - - - - - - 0.903 - - CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
61. ARFRP1 ENSGALG00000006101 3743 0.902 - - - - - - - 0.902 - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
62. TRIM24 ENSGALG00000012823 2725 0.902 - - - - - - - 0.902 - - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
63. BRCC3 ENSGALG00000005383 4844 0.902 - - - - - - - 0.902 - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
64. BID ENSGALG00000013039 12427 0.902 - - - - - - - 0.902 - - BH3 interacting domain death agonist [Source:NCBI gene;Acc:395236]
65. DUSP14 ENSGALG00000027641 3662 0.902 - - - - - - - 0.902 - - dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]
66. VCAN ENSGALG00000015624 11489 0.9 - - - - - - - 0.900 - - versican [Source:NCBI gene;Acc:395565]
67. CAMSAP2 ENSGALG00000002145 6109 0.9 - - - - - - - 0.900 - - calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
68. KHDRBS1 ENSGALG00000003272 4249 0.9 - - - - - - - 0.900 - - KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
69. NDUFAF1 ENSGALG00000008587 14779 0.9 - - - - - - - 0.900 - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
70. RDM1 ENSGALG00000000243 3388 0.899 - - - - - - - 0.899 - - RAD52 motif containing 1 [Source:NCBI gene;Acc:395228]
71. EFHD1 ENSGALG00000001428 2831 0.898 - - - - - - - 0.898 - - EF-hand domain family member D1 [Source:NCBI gene;Acc:424741]
72. FXR1 ENSGALG00000008864 10250 0.897 - - - - - - - 0.897 - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
73. CTSC ENSGALG00000017239 7651 0.895 - - - - - - - 0.895 - - Gallus gallus cathepsin C (CTSC), mRNA. [Source:RefSeq mRNA;Acc:NM_001321554]
74. UCK2 ENSGALG00000003510 2512 0.895 - - - - - - - 0.895 - - uridine-cytidine kinase 2 [Source:NCBI gene;Acc:424406]
75. NET1 ENSGALG00000008437 9850 0.894 - - - - - - - 0.894 - - neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
76. gga-mir-1772 ENSGALG00000025300 2892 0.894 - - - - - - - 0.894 - - gga-mir-1772 [Source:miRBase;Acc:MI0007515]
77. CCDC61 ENSGALG00000006714 8066 0.894 - - - - - - - 0.894 - - coiled-coil domain containing 61 [Source:NCBI gene;Acc:424880]
78. BCLAF1 ENSGALG00000013935 7596 0.893 - - - - - - - 0.893 - - BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
79. PYCR1 ENSGALG00000007300 7987 0.893 - - - - - - - 0.893 - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
80. DCTN5 ENSGALG00000006088 3113 0.893 - - - - - - - 0.893 - - dynactin subunit 5 [Source:NCBI gene;Acc:416574]
81. MTMR9 ENSGALG00000016649 2055 0.893 - - - - - - - 0.893 - - myotubularin related protein 9 [Source:NCBI gene;Acc:422033]
82. RNF144A ENSGALG00000028709 2855 0.89 - - - - - - - 0.890 - - ring finger protein 144A, transcript variant X1
83. TMEM59 ENSGALG00000010746 4669 0.89 - - - - - - - 0.890 - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
84. SLC35E3 ENSGALG00000009940 8560 0.889 - - - - - - - 0.889 - - solute carrier family 35 member E3 [Source:NCBI gene;Acc:417842]
85. FGFR1OP ENSGALG00000011423 2418 0.889 - - - - - - - 0.889 - - FGFR1 oncogene partner [Source:HGNC Symbol;Acc:HGNC:17012]
86. PPCS ENSGALG00000004882 5759 0.889 - - - - - - - 0.889 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
87. NDUFS6 ENSGALG00000013191 15874 0.889 - - - - - - - 0.889 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:HGNC Symbol;Acc:HGNC:7713]
88. MARC1 ENSGALG00000009453 5675 0.889 - - - - - - - 0.889 - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
89. DNAJA1 ENSGALG00000023066 3820 0.888 - - - - - - - 0.888 - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
90. REXO1 ENSGALG00000001043 3179 0.888 - - - - - - - 0.888 - - RNA exonuclease 1 homolog [Source:HGNC Symbol;Acc:HGNC:24616]
91. VGLL4 ENSGALG00000004937 3762 0.887 - - - - - - - 0.887 - - vestigial like family member 4 [Source:NCBI gene;Acc:415962]
92. BCAP29 ENSGALG00000008009 8519 0.887 - - - - - - - 0.887 - - B cell receptor associated protein 29 [Source:NCBI gene;Acc:417702]
93. GOLGB1 ENSGALG00000041494 2376 0.886 - - - - - - - 0.886 - - golgin B1 [Source:HGNC Symbol;Acc:HGNC:4429]
94. CEP170 ENSGALG00000010733 4177 0.886 - - - - - - - 0.886 - - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
95. EDEM1 ENSGALG00000008320 3117 0.885 - - - - - - - 0.885 - - ER degradation enhancing alpha-mannosidase like protein 1 [Source:NCBI gene;Acc:416110]
96. PWWP2A ENSGALG00000038202 3686 0.884 - - - - - - - 0.884 - - PWWP domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29406]
97. BTG1L ENSGALG00000004676 2293 0.883 - - - - - - - 0.883 - - protein BTG1-like
98. WASH1 WASH1 3240 0.883 - - - - - - - 0.883 - -
99. NAE1 ENSGALG00000038957 13777 0.882 - - - - - - - 0.882 - - NEDD8 activating enzyme E1 subunit 1 [Source:NCBI gene;Acc:415792]
100. PKP4 ENSGALG00000012561 3087 0.882 - - - - - - - 0.882 - - plakophilin 4 [Source:NCBI gene;Acc:424328]

There are 299 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA