Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HP1BP3

Gene Name Gene ID Reads Annotation
HP1BP3 ENSGALG00000010079 33723 heterochromatin protein 1 binding protein 3 [Source:NCBI gene;Acc:425543]











Genes with expression patterns similar to HP1BP3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HP1BP3 ENSGALG00000010079 33723 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 heterochromatin protein 1 binding protein 3 [Source:NCBI gene;Acc:425543]
2. S100A11 ENSGALG00000036711 23454 2.402 - - 0.712 - - - 0.977 - - 0.713 S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
3. PRKCI ENSGALG00000009364 11574 1.797 - - - - 0.826 - 0.971 - - - protein kinase C iota [Source:NCBI gene;Acc:424991]
4. EIF3H ENSGALG00000040522 39919 1.755 - - 0.770 - - - 0.985 - - - eukaryotic translation initiation factor 3 subunit H [Source:NCBI gene;Acc:420288]
5. ATP2B4 ENSGALG00000003601 3746 1.749 - - 0.783 - - - 0.966 - - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
6. YWHAH ENSGALG00000006743 29828 1.742 - - - - 0.762 - 0.980 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta [Source:NCBI gene;Acc:416955]
7. RPL30 ENSGALG00000029897 58241 1.709 - - 0.729 - - - 0.980 - - - ribosomal protein L30 [Source:NCBI gene;Acc:425416]
8. LZIC ENSGALG00000002616 9052 1.636 - - 0.808 - 0.828 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
9. BRIX1 ENSGALG00000003373 27878 1.602 - - - - 0.776 - - - - 0.826 BRX1, biogenesis of ribosomes [Source:NCBI gene;Acc:427433]
10. FURIN ENSGALG00000008341 2609 1.595 - - 0.806 - - - - - - 0.789 furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
11. PON2 ENSGALG00000009689 1416 1.593 - - 0.856 - - - - - - 0.737 paraoxonase 2 [Source:NCBI gene;Acc:395830]
12. SDCBP ENSGALG00000015436 1228 1.593 - - 0.786 - 0.807 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
13. SPEN ENSGALG00000036932 9688 1.571 - - - - 0.868 - - - - 0.703 spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
14. PHIP ENSGALG00000015889 2348 1.554 - - 0.844 - - - - - - 0.710 pleckstrin homology domain interacting protein [Source:HGNC Symbol;Acc:HGNC:15673]
15. PDCD4 ENSGALG00000008700 574 1.546 - - 0.802 - - - - - - 0.744 programmed cell death 4 [Source:NCBI gene;Acc:374191]
16. PRDM4 ENSGALG00000012619 876 1.545 - - - - 0.811 - - - 0.734 - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
17. PUM2 ENSGALG00000016481 23625 1.511 - - 0.742 - - - 0.769 - - - pumilio RNA binding family member 2 [Source:NCBI gene;Acc:421961]
18. FGF12 ENSGALG00000036971 2631 1.475 - - - - - - - - 0.746 0.729 fibroblast growth factor 12 [Source:NCBI gene;Acc:395704]
19. RAB34 ENSGALG00000026315 1193 1.47 - - 0.730 - - - - - - 0.740 RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
20. FTSJ2 FTSJ2 2951 1.461 - - 0.746 - - - - - 0.715 -
21. RPL23A ENSGALG00000003966 369097 0.989 - - - - - - 0.989 - - - ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
22. MPHOSPH6 ENSGALG00000031983 17073 0.985 - - - - - - 0.985 - - - M-phase phosphoprotein 6 [Source:NCBI gene;Acc:415811]
23. KDM2B ENSGALG00000004225 11513 0.98 - - - - - - 0.980 - - - lysine demethylase 2B [Source:HGNC Symbol;Acc:HGNC:13610]
24. KIAA1143 ENSGALG00000035952 6735 0.978 - - - - - - 0.978 - - - KIAA1143 [Source:NCBI gene;Acc:420709]
25. EEF2 ENSGALG00000033884 62036 0.977 - - - - - - 0.977 - - - eukaryotic translation elongation factor 2 [Source:NCBI gene;Acc:396325]
26. COPS5 ENSGALG00000030843 11942 0.977 - - - - - - 0.977 - - - COP9 signalosome subunit 5 [Source:NCBI gene;Acc:426579]
27. CCNB2 ENSGALG00000004161 50324 0.977 - - - - - - 0.977 - - - cyclin B2 [Source:NCBI gene;Acc:415400]
28. RTF1 ENSGALG00000008595 31933 0.976 - - - - - - 0.976 - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:HGNC Symbol;Acc:HGNC:28996]
29. STAM ENSGALG00000035287 7649 0.976 - - - - - - 0.976 - - - signal transducing adaptor molecule [Source:HGNC Symbol;Acc:HGNC:11357]
30. PLEKHH2 ENSGALG00000009947 6384 0.975 - - - - - - 0.975 - - - pleckstrin homology, MyTH4 and FERM domain containing H2 [Source:HGNC Symbol;Acc:HGNC:30506]
31. AIFM1 ENSGALG00000004003 10451 0.972 - - - - - - 0.972 - - - apoptosis inducing factor mitochondria associated 1 [Source:NCBI gene;Acc:428688]
32. MYH10 ENSGALG00000001183 26889 0.972 - - - - - - 0.972 - - - myosin, heavy chain 10, non-muscle [Source:NCBI gene;Acc:396465]
33. MEIS1 ENSGALG00000041626 3865 0.971 - - - - - - 0.971 - - - Meis homeobox 1 [Source:NCBI gene;Acc:395589]
34. TYW3 ENSGALG00000032549 4869 0.971 - - - - - - 0.971 - - - tRNA-yW synthesizing protein 3 homolog [Source:NCBI gene;Acc:424720]
35. MYLK ENSGALG00000011708 10434 0.971 - - - - - - 0.971 - - - Gallus gallus myosin light chain kinase (MYLK), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001322361]
36. N6AMT2 N6AMT2 4703 0.97 - - - - - - 0.970 - - -
37. NUBP2 ENSGALG00000002316 3643 0.97 - - - - - - 0.970 - - - nucleotide binding protein 2 [Source:NCBI gene;Acc:416402]
38. ACADSB ENSGALG00000041417 7710 0.97 - - - - - - 0.970 - - - acyl-CoA dehydrogenase short/branched chain [Source:NCBI gene;Acc:423947]
39. DAP ENSGALG00000013002 6815 0.969 - - - - - - 0.969 - - - death associated protein [Source:NCBI gene;Acc:420923]
40. CUX1_1 ENSGALG00000021636 3705 0.969 - - - - - - 0.969 - - - cut like homeobox 1 [Source:NCBI gene;Acc:101749861]
41. CFC1 ENSGALG00000012623 3164 0.968 - - - - - - 0.968 - - - cripto, FRL-1, cryptic family 1 [Source:NCBI gene;Acc:395437]
42. SEC11C ENSGALG00000031663 4266 0.968 - - - - - - 0.968 - - - SEC11 homolog C, signal peptidase complex subunit [Source:HGNC Symbol;Acc:HGNC:23400]
43. ZFAND1 ENSGALG00000042794 2849 0.968 - - - - - - 0.968 - - - zinc finger AN1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:25858]
44. CHCHD2 ENSGALG00000002495 99536 0.964 - - - - - - 0.964 - - - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
45. TTR ENSGALG00000015143 9764 0.961 - - - - - - 0.961 - - - transthyretin [Source:NCBI gene;Acc:396277]
46. PHB2 ENSGALG00000014567 104774 0.959 - - - - - - 0.959 - - - prohibitin 2 [Source:NCBI gene;Acc:771124]
47. UBB ENSGALG00000004509 139598 0.955 - - - - - - 0.955 - - - Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
48. NDUFA5 ENSGALG00000008821 22926 0.921 - - - - - - 0.921 - - - NADH:ubiquinone oxidoreductase subunit A5 [Source:NCBI gene;Acc:417753]
49. KIF2A ENSGALG00000014737 16391 0.889 - - - - 0.889 - - - - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
50. KPNA2 ENSGALG00000003584 76058 0.889 - - - - 0.889 - - - - - karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
51. GSPT1 15580 0.883 - - - - 0.883 - - - - - G1 to S phase transition 1, transcript variant X1
52. UBE2D3 ENSGALG00000012311 39831 0.883 - - - - 0.883 - - - - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
53. HSP90AA1 ENSGALG00000033212 55740 0.879 - - - - - - 0.879 - - - heat shock protein 90 alpha family class A member 1 [Source:NCBI gene;Acc:423463]
54. TOP2B ENSGALG00000011300 25048 0.878 - - - - 0.878 - - - - - DNA topoisomerase 2-beta [Source:NCBI gene;Acc:395966]
55. DDOST ENSGALG00000010073 18707 0.872 - - - - 0.872 - - - - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [Source:NCBI gene;Acc:425542]
56. G3BP1 ENSGALG00000004160 36795 0.871 - - - - 0.871 - - - - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
57. SELT SELT 25524 0.869 - - - - 0.869 - - - - -
58. HNRNPAB ENSGALG00000014381 41009 0.867 - - - - - - 0.867 - - - heterogeneous nuclear ribonucleoprotein A/B [Source:NCBI gene;Acc:396268]
59. DENR ENSGALG00000003795 30805 0.866 - - - - 0.866 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
60. USMG5 ENSGALG00000034645 33263 0.866 - - - - 0.866 - - - - - up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
61. MAPK6 ENSGALG00000031448 28384 0.865 - - - - - - 0.865 - - - mitogen-activated protein kinase 6 [Source:NCBI gene;Acc:415419]
62. TBL1X ENSGALG00000040006 28597 0.863 - - - - 0.863 - - - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
63. MRPL21 ENSGALG00000004362 20796 0.863 - - - - 0.863 - - - - - mitochondrial ribosomal protein L21 [Source:NCBI gene;Acc:423000]
64. MRPS26 ENSGALG00000014118 27422 0.863 - - - - 0.863 - - - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
65. STK4 ENSGALG00000004098 11366 0.862 - - - - 0.862 - - - - - serine/threonine kinase 4 [Source:NCBI gene;Acc:419187]
66. NAA16 ENSGALG00000032808 3366 0.862 - - 0.862 - - - - - - - N(alpha)-acetyltransferase 16, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:26164]
67. RBX1 ENSGALG00000011993 26090 0.862 - - - - - - 0.862 - - - ring-box 1 [Source:NCBI gene;Acc:418001]
68. CDCA4 ENSGALG00000011692 10381 0.859 - - - - 0.859 - - - - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
69. MYBL2 ENSGALG00000003503 15875 0.858 - - - - 0.858 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
70. VMP1 ENSGALG00000005160 12859 0.858 - - - - 0.858 - - - - - vacuole membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:29559]
71. Mar-05 Mar-05 6330 0.856 - - - - 0.856 - - - - -
72. TM9SF3 ENSGALG00000005534 15290 0.855 - - - - 0.855 - - - - - transmembrane 9 superfamily member 3
73. RAD23B ENSGALG00000015540 10828 0.854 - - - - 0.854 - - - - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
74. PSMD3 ENSGALG00000033162 25615 0.852 - - - - 0.852 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
75. TAF3 ENSGALG00000006731 15569 0.851 - - - - 0.851 - - - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
76. NDUFS4 ENSGALG00000028026 25876 0.851 - - - - 0.851 - - - - - NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]
77. UQCRH ENSGALG00000017380 55734 0.851 - - - - 0.851 - - - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
78. LRR1 ENSGALG00000012230 1062 0.851 - - 0.851 - - - - - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
79. POLR2E ENSGALG00000002591 26405 0.851 - - - - 0.851 - - - - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
80. HDAC8 ENSGALG00000004825 12066 0.851 - - - - 0.851 - - - - - histone deacetylase 8, transcript variant X2
81. SLMO2 SLMO2 9207 0.851 - - - - 0.851 - - - - -
82. PHF2 ENSGALG00000039208 2003 0.851 - - 0.851 - - - - - - - PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
83. SLC30A4 ENSGALG00000005703 5696 0.85 - - - - 0.850 - - - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
84. ZC3H6 ENSGALG00000008269 10353 0.85 - - - - 0.850 - - - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
85. RGP1 ENSGALG00000002394 5937 0.85 - - - - - - 0.850 - - - RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
86. SRP19 ENSGALG00000000218 14207 0.848 - - - - 0.848 - - - - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
87. SRSF7 ENSGALG00000033120 43444 0.848 - - - - 0.848 - - - - - serine and arginine rich splicing factor 7 [Source:NCBI gene;Acc:426265]
88. PRCC ENSGALG00000040696 9346 0.847 - - - - 0.847 - - - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
89. ZDHHC6 ENSGALG00000008870 16575 0.846 - - - - 0.846 - - - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
90. NEK6 ENSGALG00000001118 20333 0.844 - - - - 0.844 - - - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
91. SRGAP1 ENSGALG00000009825 6753 0.844 - - - - 0.844 - - - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
92. SLC16A1 ENSGALG00000001717 18566 0.843 - - - - 0.843 - - - - - solute carrier family 16 member 1 [Source:NCBI gene;Acc:419875]
93. MINOS1 ENSGALG00000004039 37740 0.843 - - - - 0.843 - - - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
94. YLPM1 671 0.842 - - 0.842 - - - - - - - YLP motif containing 1
95. RNF4 ENSGALG00000015668 15780 0.842 - - - - 0.842 - - - - - ring finger protein 4 [Source:NCBI gene;Acc:422886]
96. CHMP5 ENSGALG00000013160 13347 0.842 - - - - 0.842 - - - - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
97. ACTG1_1 ENSGALG00000001381 64662 0.841 - - - - 0.841 - - - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
98. DNAJC9 ENSGALG00000002701 19249 0.841 - - - - 0.841 - - - - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
99. CDCA7 ENSGALG00000040833 7484 0.84 - - - - 0.840 - - - - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
100. NUP88 ENSGALG00000032280 9847 0.84 - - - - 0.840 - - - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]

There are 457 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA