Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for HOXD9

Gene Name Gene ID Reads Annotation
HOXD9 ENSGALG00000027513 89 homeobox D9 [Source:HGNC Symbol;Acc:HGNC:5140]











Genes with expression patterns similar to HOXD9

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HOXD9 ENSGALG00000027513 89 3 - 1.000 - - - 1.000 - - - 1.000 homeobox D9 [Source:HGNC Symbol;Acc:HGNC:5140]
2. ATP6V0D1 ENSGALG00000002237 13 1 - - - - - - - - - 1.000 ATPase H+ transporting V0 subunit d1 [Source:NCBI gene;Acc:415674]
3. SLC13A1 ENSGALG00000008874 2 1 - - - - - - - - - 1.000 solute carrier family 13 member 1 [Source:HGNC Symbol;Acc:HGNC:10916]
4. ARHGAP22 ENSGALG00000006137 4 1 - - - - - - - - - 1.000 Rho GTPase activating protein 22, transcript variant X3
5. GPR65 ENSGALG00000010595 2 1 - - - - - - - - - 1.000 G protein-coupled receptor 65 [Source:HGNC Symbol;Acc:HGNC:4517]
6. C20orf85 ENSGALG00000027484 3 1 - - - - - - - - - 1.000 chromosome 20 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:16216]
7. MTMR7 13 1 - - - - - - - - - 1.000 myotubularin related protein 7, transcript variant X1
8. ENSGALG00000021106 ENSGALG00000021106 35 1 - - - - - - - - - 1.000
9. FGA ENSGALG00000009266 291 1 - - - - - - - - - 1.000 fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
10. TMEM259 ENSGALG00000002029 8 1 - - - - - - - - - 1.000 transmembrane protein 259 [Source:HGNC Symbol;Acc:HGNC:17039]
11. ABCD4 ENSGALG00000010229 3 1 - - - - - - - - - 1.000 ATP binding cassette subfamily D member 4 [Source:HGNC Symbol;Acc:HGNC:68]
12. IMPG1 ENSGALG00000015897 4 1 - - - - - - - - - 1.000 interphotoreceptor matrix proteoglycan 1 [Source:NCBI gene;Acc:374088]
13. RAB37 ENSGALG00000027789 17 1 - - - - - - - - - 1.000 RAB37, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30268]
14. GRHL2 ENSGALG00000037687 3 1 - - - - - - - - - 1.000 grainyhead like transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:2799]
15. BFGF BFGF 1 1 - - - - - - - - - 1.000
16. ATG7 ENSGALG00000004932 8 1 - - - - - - - - - 1.000 autophagy related 7 [Source:NCBI gene;Acc:415961]
17. LNX2 LNX2 4 1 - - - - - - - - - 1.000
18. LDB1 ENSGALG00000007641 2 1 - - - - - - - - - 1.000 LIM domain binding 1 [Source:NCBI gene;Acc:395952]
19. CACNA1H ENSGALG00000005215 110 1 - - - - - - - - - 1.000 calcium voltage-gated channel subunit alpha1 H [Source:HGNC Symbol;Acc:HGNC:1395]
20. ADAM33 ENSGALG00000030602 7 1 - - - - - - - - - 1.000 ADAM metallopeptidase domain 33 [Source:NCBI gene;Acc:422948]
21. JAKMIP3 ENSGALG00000010486 2 1 - - - - - - - - - 1.000 Janus kinase and microtubule interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:23523]
22. LIN52 ENSGALG00000020419 37 1 - - - - - - - - - 1.000 lin-52 DREAM MuvB core complex component [Source:NCBI gene;Acc:423346]
23. BCAS1 ENSGALG00000007796 379 1 - - - - - - - - - 1.000 breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
24. ENSGALG00000018626 ENSGALG00000018626 1 1 - - - - - - - - - 1.000
25. KLHL23 ENSGALG00000020737 13 1 - - - - - - - - - 1.000 kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
26. CDH8 ENSGALG00000005319 2 1 - - - - - - - - - 1.000 cadherin 8 [Source:NCBI gene;Acc:427553]
27. SLC4A2 ENSGALG00000034284 3 1 - - - - - - - - - 1.000 solute carrier family 4 member 2 [Source:NCBI gene;Acc:395809]
28. CHSY1 ENSGALG00000026468 4 1 - - - - - - - - - 1.000 chondroitin sulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:17198]
29. FBXO43 ENSGALG00000038940 7 1 - - - - - - - - - 1.000 F-box protein 43 [Source:HGNC Symbol;Acc:HGNC:28521]
30. NKAIN4 ENSGALG00000005774 10 1 - - - - - - - - - 1.000 sodium/potassium transporting ATPase interacting 4 [Source:HGNC Symbol;Acc:HGNC:16191]
31. MGAT4C ENSGALG00000000225, ENSGALG00000028360 358 1 - - - - - - - - - 1.000 MGAT4 family member C [Source:HGNC Symbol;Acc:HGNC:30871]
32. LRRC58 ENSGALG00000033186 15 1 - - - - - - - - - 1.000 leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]
33. ENSGALG00000002252 ENSGALG00000002252 19 1 - - - - - - - - - 1.000
34. C1orf170 C1orf170 7 1 - - - - - - - - - 1.000
35. gga-mir-1801 ENSGALG00000025241 13 1 - - - - - - - - - 1.000 gga-mir-1801 [Source:miRBase;Acc:MI0007545]
36. PLEKHF1 ENSGALG00000004474 8 1 - - - - - - - - - 1.000 pleckstrin homology and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20764]
37. RBKS ENSGALG00000010043 3 1 - - - - - - - - - 1.000 ribokinase [Source:HGNC Symbol;Acc:HGNC:30325]
38. ENSGALG00000010222 ENSGALG00000010222 4 1 - - - - - - - - - 1.000
39. FAM83A ENSGALG00000041748 8 1 - - - - - - - - - 1.000 family with sequence similarity 83 member A [Source:HGNC Symbol;Acc:HGNC:28210]
40. ADCY1 ENSGALG00000031170 4 1 - - - - - - - - - 1.000 adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
41. MARCO ENSGALG00000012119 5 1 - - - - - - - - - 1.000 macrophage receptor with collagenous structure [Source:NCBI gene;Acc:395488]
42. PCDH7 ENSGALG00000033883 6 1 - - - - - - - - - 1.000 protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
43. SIX6 ENSGALG00000020359 4 1 - - - - - - - - - 1.000 SIX homeobox 6 [Source:NCBI gene;Acc:395843]
44. ODF2L ENSGALG00000006804 10 1 - - - - - - - - - 1.000 outer dense fiber of sperm tails 2 like [Source:HGNC Symbol;Acc:HGNC:29225]
45. BICD2 ENSGALG00000005249 17 1 - - - - - - - - - 1.000 BICD cargo adaptor 2 [Source:HGNC Symbol;Acc:HGNC:17208]
46. TTBK1 ENSGALG00000008627 8 0.955 - - - - - - - - - 0.955 tau tubulin kinase 1 [Source:NCBI gene;Acc:416713]
47. ZMAT3 ENSGALG00000040948 4 0.883 - - - - - - - - - 0.883 zinc finger matrin-type 3 [Source:HGNC Symbol;Acc:HGNC:29983]
48. ENSGALG00000005498 ENSGALG00000005498 11 0.864 - - - - - - - - - 0.864
49. BHLHE40 ENSGALG00000008308 1 0.851 - - - - - - - - - 0.851 basic helix-loop-helix family member e40 [Source:NCBI gene;Acc:416108]
50. ENSGALG00000023393 ENSGALG00000023393 1 0.851 - - - - - - - - - 0.851
51. RALYL ENSGALG00000036938 1 0.851 - - - - - - - - - 0.851 RALY RNA binding protein like [Source:NCBI gene;Acc:420203]
52. U6_1 U6_1 3 0.851 - - - - - - - - - 0.851
53. ARHGAP39 ENSGALG00000001536 15 0.845 - - - - - 0.845 - - - - Rho GTPase activating protein 39, transcript variant X2
54. ADCY2 ENSGALG00000013060 164 0.84 - - - - - 0.840 - - - - adenylate cyclase 2 [Source:HGNC Symbol;Acc:HGNC:233]
55. RGS14 ENSGALG00000003113 870 0.839 - - - - - 0.839 - - - - regulator of G protein signaling 14 [Source:HGNC Symbol;Acc:HGNC:9996]
56. LETM2 ENSGALG00000036049 19 0.839 - - - - - 0.839 - - - - leucine zipper and EF-hand containing transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:14648]
57. GLRB ENSGALG00000009395 9 0.832 - - - - - - - - - 0.832 glycine receptor beta [Source:HGNC Symbol;Acc:HGNC:4329]
58. gga-mir-6703 ENSGALG00000029026 124 0.828 - - - - - 0.828 - - - - gga-mir-6703 [Source:miRBase;Acc:MI0022525]
59. ARRDC1 ENSGALG00000008475 80 0.825 - - - - - - - - - 0.825 arrestin domain containing 1 [Source:NCBI gene;Acc:427772]
60. ENSGALG00000026592 ENSGALG00000026592 4331 0.806 - - - - - 0.806 - - - -
61. ZPLD1 ENSGALG00000015347 12 0.8 - - - - - - - - - 0.800 zona pellucida like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:27022]
62. CCNJ ENSGALG00000006955 47 0.795 - - - - - 0.795 - - - - cyclin J [Source:HGNC Symbol;Acc:HGNC:23434]
63. TMEM8C ENSGALG00000021520 30 0.793 - - - - - - - - - 0.793 Gallus gallus transmembrane protein 8C (TMEM8C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318457]
64. INPP4A ENSGALG00000029709 48 0.79 - - - - - 0.790 - - - - inositol polyphosphate-4-phosphatase type I A [Source:HGNC Symbol;Acc:HGNC:6074]
65. PALM2 ENSGALG00000015655 20 0.788 - - - - - 0.788 - - - - paralemmin 2 [Source:HGNC Symbol;Acc:HGNC:15845]
66. PCID2 ENSGALG00000016831 57 0.787 - - - - - 0.787 - - - - PCI domain containing 2 [Source:NCBI gene;Acc:418745]
67. ABLIM1 ENSGALG00000009048 19 0.787 - - - - - 0.787 - - - - actin binding LIM protein 1 [Source:NCBI gene;Acc:423911]
68. PRPF19 ENSGALG00000040048 168 0.785 - - - - - 0.785 - - - - pre-mRNA processing factor 19 [Source:NCBI gene;Acc:430767]
69. NPY2R ENSGALG00000009280 29 0.779 - - - - - - - - - 0.779 neuropeptide Y receptor Y2 [Source:NCBI gene;Acc:422405]
70. C17orf62 C17orf62 37 0.779 - - - - - 0.779 - - - -
71. NRP2 ENSGALG00000008621 29 0.778 - - - - - - - - - 0.778 neuropilin 2 [Source:NCBI gene;Acc:374157]
72. ENSGALG00000020194 ENSGALG00000020194 22 0.776 - - - - - 0.776 - - - -
73. TTLL7 ENSGALG00000008850 49 0.775 - - - - - 0.775 - - - - tubulin tyrosine ligase like 7 [Source:HGNC Symbol;Acc:HGNC:26242]
74. ENSGALG00000027352 ENSGALG00000027352 69 0.774 - - - - - 0.774 - - - -
75. GLOD5 ENSGALG00000025991 17 0.771 - - - - - 0.771 - - - - glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
76. GPR88 ENSGALG00000005252 4 0.771 - - - - - 0.771 - - - - G protein-coupled receptor 88 [Source:HGNC Symbol;Acc:HGNC:4539]
77. ENSGALG00000028413 ENSGALG00000028413 551 0.771 - - - - - 0.771 - - - -
78. ANGPTL3 ENSGALG00000010978 335 0.771 - - - - - 0.771 - - - - angiopoietin like 3 [Source:NCBI gene;Acc:100189558]
79. HINFP ENSGALG00000006806 15 0.771 - - - - - 0.771 - - - - histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
80. CYP2H1 CYP2H1 363 0.771 - - - - - 0.771 - - - -
81. SERPINA12 SERPINA12 3 0.771 - - - - - 0.771 - - - -
82. CPED1 ENSGALG00000009002 71 0.77 - - - - - - - - - 0.770 cadherin-like and PC-esterase domain containing 1, transcript variant X4
83. HMGCS2 ENSGALG00000002960 54 0.769 - - - - - 0.769 - - - - 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
84. UBE3C ENSGALG00000006461 57 0.767 - - - - - 0.767 - - - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
85. CCDC40 ENSGALG00000007042 596 0.762 - - - - - 0.762 - - - - coiled-coil domain containing 40 [Source:HGNC Symbol;Acc:HGNC:26090]
86. INTU ENSGALG00000010170 78 0.758 - - - - - 0.758 - - - - inturned planar cell polarity protein [Source:HGNC Symbol;Acc:HGNC:29239]
87. P2RY1 ENSGALG00000010357 11 0.758 - - - - - 0.758 - - - - purinergic receptor P2Y1 [Source:NCBI gene;Acc:396275]
88. CCDC33 7 0.758 - - - - - - - - - 0.758 coiled-coil domain containing 33, transcript variant X2
89. TMEM117 ENSGALG00000009596 48 0.755 - - - - - 0.755 - - - - transmembrane protein 117 [Source:HGNC Symbol;Acc:HGNC:25308]
90. KATNB1 ENSGALG00000034373 195 0.754 - - - - - 0.754 - - - - katanin regulatory subunit B1 [Source:NCBI gene;Acc:415631]
91. VWA3B ENSGALG00000040709 5 0.751 - - - - - - - - - 0.751 von Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]
92. ASB7 ENSGALG00000007115 3 0.751 - - - - - - - - - 0.751 ankyrin repeat and SOCS box containing 7 [Source:NCBI gene;Acc:415518]
93. CRYBA2 ENSGALG00000011354 14 0.749 - - - - - 0.749 - - - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
94. RPL3L ENSGALG00000005458 9 0.747 - - - - - 0.747 - - - - ribosomal protein L3 like [Source:NCBI gene;Acc:416542]
95. ST18 ENSGALG00000015254 117 0.746 - - - - - - - - - 0.746 ST18, C2H2C-type zinc finger [Source:HGNC Symbol;Acc:HGNC:18695]
96. RAD54L2 ENSGALG00000003243 187 0.744 - - - - - 0.744 - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
97. CPA6 ENSGALG00000041918 54 0.743 - - - - - 0.743 - - - - carboxypeptidase A6 [Source:NCBI gene;Acc:420171]
98. GLS ENSGALG00000030419 440 0.737 - - - - - 0.737 - - - - glutaminase [Source:NCBI gene;Acc:424043]
99. PRPF6 ENSGALG00000006001 8572 0.734 - - - - - 0.734 - - - - pre-mRNA processing factor 6 [Source:HGNC Symbol;Acc:HGNC:15860]
100. SMAD7A SMAD7A 78 0.734 - - - - - 0.734 - - - -

There are 21 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA