Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HOXD8

Gene Name Gene ID Reads Annotation
HOXD8 ENSGALG00000037272 4338 homeobox D8 [Source:NCBI gene;Acc:396301]











Genes with expression patterns similar to HOXD8

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HOXD8 ENSGALG00000037272 4338 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homeobox D8 [Source:NCBI gene;Acc:396301]
2. PAX2 ENSGALG00000005689 351 2.539 - - - 0.876 0.842 - - - - 0.821 paired box 2 [Source:NCBI gene;Acc:395574]
3. TSPAN8 ENSGALG00000010152 2666 2.441 - - - 0.755 0.852 - - - - 0.834 tetraspanin 8 [Source:NCBI gene;Acc:417854]
4. ASTL ENSGALG00000037220 2775 2.435 - - - - 0.883 - - - 0.726 0.826 astacin like metalloendopeptidase [Source:NCBI gene;Acc:423176]
5. TMEM52B ENSGALG00000034698 169 2.426 - - - - 0.814 - - - 0.802 0.810 transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
6. MCM2 ENSGALG00000006037 13458 1.947 - - - - - - 0.993 0.954 - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
7. GAL10 GAL10 33355 1.746 - - - - 0.909 - - - - 0.837
8. CDH1 ENSGALG00000000608 6156 1.559 - - - - - - - 0.776 - 0.783 cadherin 3 [Source:NCBI gene;Acc:414845]
9. DCDC2 ENSGALG00000042454 2306 1.516 - - - - 0.718 - - - - 0.798 doublecortin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18141]
10. CDH17 ENSGALG00000035094 521 1.507 - - - - - - - - 0.725 0.782 cadherin 17 [Source:NCBI gene;Acc:420225]
11. HNF1B ENSGALG00000005504 1146 1.506 - - - - - - - - 0.763 0.743 HNF1 homeobox B [Source:HGNC Symbol;Acc:HGNC:11630]
12. ENSGALG00000018431 ENSGALG00000018431 2 1 - - - 1.000 - - - - - -
13. ENSGALG00000028038 ENSGALG00000028038 9 1 - - - 1.000 - - - - - -
14. IRX6 ENSGALG00000023738 2 1 - - - 1.000 - - - - - - iroquois homeobox 6 [Source:HGNC Symbol;Acc:HGNC:14675]
15. ENSGALG00000021026 ENSGALG00000021026 2 1 - - - 1.000 - - - - - -
16. CTSD ENSGALG00000006613 4 1 - - - 1.000 - - - - - - cathepsin D [Source:NCBI gene;Acc:396090]
17. gga-mir-218-1 ENSGALG00000018327 3 1 - - - 1.000 - - - - - - gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
18. ENSGALG00000026721 ENSGALG00000026721 1 1 - - - 1.000 - - - - - -
19. XKRX ENSGALG00000006637 13 1 - - - 1.000 - - - - - - XK related, X-linked, transcript variant X4
20. TP53TG5 ENSGALG00000021357 1 1 - - - 1.000 - - - - - - TP53 target 5, transcript variant X9
21. AVDL ENSGALG00000021848 1 1 - - - 1.000 - - - - - - avidin-like, transcript variant X2
22. ENSGALG00000013079 ENSGALG00000013079 12 1 - - - 1.000 - - - - - -
23. RGS10 ENSGALG00000009422 10 1 - - - 1.000 - - - - - - regulator of G protein signaling 10 [Source:HGNC Symbol;Acc:HGNC:9992]
24. TMEM97 ENSGALG00000005702 2037 0.999 - - - - - - 0.999 - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
25. ENSGALG00000014190 ENSGALG00000014190 5735 0.999 - - - - - - 0.999 - - -
26. CTU2 4818 0.999 - - - - - - 0.999 - - - cytosolic thiouridylase subunit 2, transcript variant X3
27. M6PR ENSGALG00000031681 9442 0.999 - - - - - - 0.999 - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
28. TMEM120B ENSGALG00000004254 2819 0.999 - - - - - - 0.999 - - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
29. PTBP2 ENSGALG00000005552 3443 0.999 - - - - - - 0.999 - - - polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]
30. CAND1 4541 0.999 - - - - - - 0.999 - - - cullin associated and neddylation dissociated 1
31. EGFLAM ENSGALG00000003726 4588 0.999 - - - - - - 0.999 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X1
32. POLR1C ENSGALG00000010349 7059 0.999 - - - - - - 0.999 - - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
33. ABCC10 2213 0.999 - - - - - - 0.999 - - - ATP binding cassette subfamily C member 10, transcript variant X10
34. ENSGALG00000004773 ENSGALG00000004773 10418 0.998 - - - - - - 0.998 - - -
35. TMC1 ENSGALG00000015145 1180 0.998 - - - - - - 0.998 - - - transmembrane channel like 1 [Source:NCBI gene;Acc:427255]
36. TMEM62 ENSGALG00000009260 1170 0.998 - - - - - - 0.998 - - - transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
37. BMP3 ENSGALG00000035052 3260 0.998 - - - - - - 0.998 - - - bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
38. MRPL32 ENSGALG00000037258 6861 0.998 - - - - - - 0.998 - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
39. MOB3A ENSGALG00000031729 9690 0.998 - - - - - - 0.998 - - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
40. IMP4 ENSGALG00000029152 11669 0.997 - - - - - - 0.997 - - - IMP4, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:100857200]
41. POLR2D ENSGALG00000002057 14548 0.996 - - - - - - 0.996 - - - RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]
42. EIF3J ENSGALG00000008187 43570 0.996 - - - - - - 0.996 - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
43. PHGDH ENSGALG00000002988 6912 0.995 - - - - - - 0.995 - - - phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
44. PFDN4 ENSGALG00000007792 26514 0.993 - - - - - - 0.993 - - - prefoldin subunit 4 [Source:NCBI gene;Acc:419337]
45. PRDX6 ENSGALG00000003053 17928 0.991 - - - - - - 0.991 - - - peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
46. ITGA1 ENSGALG00000014891 11378 0.99 - - - - - - 0.990 - - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
47. CHNTHL1 CHNTHL1 4976 0.989 - - - - - - 0.989 - - -
48. FAM103A1 17380 0.989 - - - - - - 0.989 - - - family with sequence similarity 103 member A1, transcript variant X2
49. GAB1 ENSGALG00000009898 2741 0.989 - - - - - - - 0.989 - - GRB2 associated binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4066]
50. FBN3 ENSGALG00000037625 23313 0.989 - - - - - - 0.989 - - - fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]
51. ATP5MC1 ENSGALG00000001330 37766 0.989 - - - - - - 0.989 - - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
52. DDX21 ENSGALG00000004144 13105 0.989 - - - - - - 0.989 - - - DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
53. DYNLL2 ENSGALG00000005522 17107 0.987 - - - - - - 0.987 - - - dynein light chain LC8-type 2 [Source:NCBI gene;Acc:417663]
54. SMC2 ENSGALG00000015691 34013 0.981 - - - - - - 0.981 - - - structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
55. DENR ENSGALG00000003795 30805 0.981 - - - - - - 0.981 - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
56. TBX2 ENSGALG00000034297 57 0.969 - - - 0.969 - - - - - - T-box 2 [Source:HGNC Symbol;Acc:HGNC:11597]
57. PPP1R7 ENSGALG00000031766 22187 0.968 - - - - - - - 0.968 - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
58. ENSGALG00000007420 ENSGALG00000007420 7 0.967 - - - 0.967 - - - - - -
59. EIF1B ENSGALG00000038646 9508 0.967 - - - - - - - 0.967 - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
60. BOD1L1 ENSGALG00000026470 9250 0.96 - - - - - - - 0.960 - - biorientation of chromosomes in cell division 1 like 1 [Source:HGNC Symbol;Acc:HGNC:31792]
61. URI1 ENSGALG00000004506 6024 0.96 - - - - - - - 0.960 - - URI1, prefoldin like chaperone [Source:HGNC Symbol;Acc:HGNC:13236]
62. TPMT ENSGALG00000012687 9537 0.959 - - - - - - - 0.959 - - thiopurine S-methyltransferase [Source:HGNC Symbol;Acc:HGNC:12014]
63. EIF4E2 ENSGALG00000007919 8163 0.959 - - - - - - - 0.959 - - eukaryotic translation initiation factor 4E family member 2 [Source:HGNC Symbol;Acc:HGNC:3293]
64. IMPA1 ENSGALG00000034487 3691 0.958 - - - - - - - 0.958 - - inositol monophosphatase 1 [Source:HGNC Symbol;Acc:HGNC:6050]
65. DGCR2 ENSGALG00000005891 8405 0.958 - - - - - - - 0.958 - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
66. SSU72 ENSGALG00000001489 7589 0.958 - - - - - - - 0.958 - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:NCBI gene;Acc:419410]
67. ING4 ENSGALG00000014457 5561 0.957 - - - - - - - 0.957 - - inhibitor of growth family member 4 [Source:NCBI gene;Acc:418281]
68. CDC42SE2 ENSGALG00000027258 4725 0.957 - - - - - - - 0.957 - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
69. CYFIP1 ENSGALG00000016736 6701 0.957 - - - - - - - 0.957 - - cytoplasmic FMR1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:13759]
70. EVC ENSGALG00000015037 1963 0.956 - - - - - - - 0.956 - - EvC ciliary complex subunit 1 [Source:NCBI gene;Acc:422851]
71. NME3 ENSGALG00000027635 5974 0.956 - - - - - - - 0.956 - - NME/NM23 nucleoside diphosphate kinase 3 [Source:NCBI gene;Acc:416399]
72. SLC4A1AP ENSGALG00000010047 3171 0.956 - - - - - - - 0.956 - - solute carrier family 4 member 1 adaptor protein [Source:HGNC Symbol;Acc:HGNC:13813]
73. HADHA ENSGALG00000016536 3791 0.956 - - - - - - - 0.956 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha [Source:NCBI gene;Acc:395929]
74. ALG6 ENSGALG00000010991 3258 0.955 - - - - - - - 0.955 - - ALG6, alpha-1,3-glucosyltransferase [Source:NCBI gene;Acc:395078]
75. PSTK 2511 0.955 - - - - - - - 0.955 - - phosphoseryl-tRNA kinase, transcript variant X1
76. SIK1 ENSGALG00000041988 2179 0.955 - - - - - - - 0.955 - - salt inducible kinase 1 [Source:NCBI gene;Acc:395417]
77. OGFOD3 ENSGALG00000001618 2438 0.955 - - - - - - - 0.955 - - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
78. SGTA ENSGALG00000014067 2248 0.954 - - - - - - - 0.954 - - small glutamine rich tetratricopeptide repeat containing alpha [Source:NCBI gene;Acc:426396]
79. C1H11ORF67 C1H11ORF67 2089 0.954 - - - - - - - 0.954 - -
80. HMGN1 ENSGALG00000016067 17375 0.954 - - - - - - - 0.954 - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
81. LANCL2 ENSGALG00000032570 815 0.953 - - - - - - - 0.953 - - LanC like 2 [Source:HGNC Symbol;Acc:HGNC:6509]
82. ARID3C ENSGALG00000005839 646 0.953 - - - - - - - 0.953 - - AT-rich interaction domain 3C [Source:HGNC Symbol;Acc:HGNC:21209]
83. SPTBN5 395 0.953 - - - - - - - 0.953 - - spectrin beta, non-erythrocytic 5
84. NCAPD2 ENSGALG00000039448 8658 0.953 - - - - - - - 0.953 - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
85. SLC30A5 ENSGALG00000014787 5573 0.953 - - - - - - - 0.953 - - solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
86. ANGPTL2 ENSGALG00000000927 2580 0.952 - - - - - - - 0.952 - - angiopoietin-like 2 [Source:NCBI gene;Acc:776031]
87. RILPL2 ENSGALG00000003321 5632 0.949 - - - - - - - 0.949 - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
88. TSG101 ENSGALG00000006312 8289 0.949 - - - - - - - 0.949 - - tumor susceptibility gene 101 [Source:NCBI gene;Acc:423082]
89. RWDD3 ENSGALG00000038421 10909 0.948 - - - - - - - 0.948 - - RWD domain containing 3 [Source:NCBI gene;Acc:424481]
90. GLMN ENSGALG00000005959 2049 0.948 - - - - - - - 0.948 - - glomulin, FKBP associated protein [Source:HGNC Symbol;Acc:HGNC:14373]
91. ALDH1A2 ENSGALG00000004270 49483 0.948 - - - - - - 0.948 - - - aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
92. PGAP2 ENSGALG00000027762 2583 0.947 - - - - - - - 0.947 - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
93. ARF6 ENSGALG00000026944 22014 0.947 - - - - - - - 0.947 - - ADP ribosylation factor 6 [Source:NCBI gene;Acc:428927]
94. TNFRSF1A ENSGALG00000039461 1569 0.946 - - - - - - - 0.946 - - TNF receptor superfamily member 1A [Source:NCBI gene;Acc:418325]
95. KCNE3 ENSGALG00000022696 561 0.944 - - - 0.944 - - - - - - potassium voltage-gated channel subfamily E regulatory subunit 3 [Source:HGNC Symbol;Acc:HGNC:6243]
96. MYLK ENSGALG00000011708 10434 0.944 - - - - - - - 0.944 - - Gallus gallus myosin light chain kinase (MYLK), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001322361]
97. TIMM10 ENSGALG00000004845 31395 0.942 - - - - - - - 0.942 - - translocase of inner mitochondrial membrane 10 [Source:NCBI gene;Acc:425202]
98. ENSGALG00000022715 ENSGALG00000022715 13 0.936 - - - 0.936 - - - - - -
99. VMA21 ENSGALG00000009065 6432 0.935 - - - - - - - 0.935 - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
100. CALM_1 CALM_1 57812 0.932 - - - - - - 0.932 - - -

There are 159 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA