Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HOXD12

Gene Name Gene ID Reads Annotation
HOXD12 ENSGALG00000009274 637 homeobox D12 [Source:NCBI gene;Acc:396178]











Genes with expression patterns similar to HOXD12

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HOXD12 ENSGALG00000009274 637 7 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 - - homeobox D12 [Source:NCBI gene;Acc:396178]
2. HOXD11 ENSGALG00000039629 658 2.412 0.759 0.865 - - - 0.788 - - - - homeobox D11 [Source:NCBI gene;Acc:395328]
3. SYNJ2BP ENSGALG00000009387, ENSGALG00000035537 124 1.577 - - - - 0.831 - - 0.746 - - synaptojanin 2 binding protein, transcript variant X2
4. MME ENSGALG00000010331 757 1.565 0.710 0.855 - - - - - - - - membrane metalloendopeptidase [Source:NCBI gene;Acc:425031]
5. TGFBRAP1 ENSGALG00000016795 81 1 - - - - 1.000 - - - - - transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
6. ENSGALG00000022694 ENSGALG00000022694 1 1 - - 1.000 - - - - - - -
7. SERPING1 ENSGALG00000007381 144 1 - - 1.000 - - - - - - - serpin family G member 1 [Source:HGNC Symbol;Acc:HGNC:1228]
8. FAM105A ENSGALG00000012965 6 1 - - 1.000 - - - - - - - family with sequence similarity 105 member A [Source:NCBI gene;Acc:769855]
9. TMEM240 ENSGALG00000035387 14 1 - - 1.000 - - - - - - - transmembrane protein 240 [Source:HGNC Symbol;Acc:HGNC:25186]
10. AHR2 ENSGALG00000023742 21 1 - - - - 1.000 - - - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
11. FANCF ENSGALG00000003660 25 1 - - - - 1.000 - - - - - FA complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
12. RGS1 ENSGALG00000002549 1 1 - - - - 1.000 - - - - - regulator of G protein signaling 1 [Source:HGNC Symbol;Acc:HGNC:9991]
13. ENSGALG00000024266 ENSGALG00000024266 5 1 - - - - 1.000 - - - - -
14. ENSGALG00000028324 ENSGALG00000028324 1 1 - - - - 1.000 - - - - -
15. LETM2 ENSGALG00000036049 19 1 - - - - 1.000 - - - - - leucine zipper and EF-hand containing transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:14648]
16. CCDC67 CCDC67 3 1 - - - - 1.000 - - - - -
17. GRAMD2 GRAMD2 3 1 - - 1.000 - - - - - - -
18. CAMK4L ENSGALG00000015203 5 1 - - 1.000 - - - - - - - calcium/calmodulin-dependent protein kinase IV-like, transcript variant X3
19. TPH2 ENSGALG00000010198 5 1 - - - - 1.000 - - - - - tryptophan hydroxylase 2 [Source:NCBI gene;Acc:408026]
20. C21orf62 ENSGALG00000040059 5 1 - - 1.000 - - - - - - - chromosome 21 open reading frame 62 [Source:HGNC Symbol;Acc:HGNC:1305]
21. RAB13 RAB13 22 1 - - 1.000 - - - - - - -
22. EBF1 ENSGALG00000003699 23 1 - - 1.000 - - - - - - - early B-cell factor 1 [Source:NCBI gene;Acc:395512]
23. SHISA6 ENSGALG00000034516 0 1 - - 1.000 - - - - - - - shisa family member 6 [Source:HGNC Symbol;Acc:HGNC:34491]
24. U2_1 U2_1 13 1 - - - - 1.000 - - - - -
25. PLA2G1BL ENSGALG00000007236 4 1 - - 1.000 - - - - - - - phospholipase A2, major isoenzyme-like
26. AMMECR1 ENSGALG00000008074 5 1 - - 1.000 - - - - - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 [Source:HGNC Symbol;Acc:HGNC:467]
27. SLCO4C1 ENSGALG00000026768 30 1 - - - - 1.000 - - - - - solute carrier organic anion transporter family member 4C1, transcript variant X4
28. ABLIM1 ENSGALG00000009048 19 1 - - - - 1.000 - - - - - actin binding LIM protein 1 [Source:NCBI gene;Acc:423911]
29. GAB3 ENSGALG00000008408 19 1 - - - - 1.000 - - - - - GRB2 associated binding protein 3 [Source:HGNC Symbol;Acc:HGNC:17515]
30. KMO ENSGALG00000007503 7 1 - - 1.000 - - - - - - - kynurenine 3-monooxygenase [Source:HGNC Symbol;Acc:HGNC:6381]
31. ENSGALG00000025610 ENSGALG00000025610 0 1 - - 1.000 - - - - - - -
32. ENSGALG00000006384 ENSGALG00000006384 3 1 - - 1.000 - - - - - - -
33. ANKFY1 ENSGALG00000001467 21 0.964 - - - - 0.964 - - - - - ankyrin repeat and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20763]
34. CACNA1H ENSGALG00000005215 110 0.95 - - - - 0.950 - - - - - calcium voltage-gated channel subunit alpha1 H [Source:HGNC Symbol;Acc:HGNC:1395]
35. ELOVL3 ENSGALG00000025772 212 0.93 - - - - - - - 0.930 - - Gallus gallus ELOVL fatty acid elongase 3 (ELOVL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318410]
36. DNAJB5 ENSGALG00000001918 81 0.93 - - - - - - - 0.930 - - DnaJ heat shock protein family (Hsp40) member B5 [Source:HGNC Symbol;Acc:HGNC:14887]
37. SNORA19 SNORA19 70 0.93 - - - - - - - 0.930 - -
38. SH3RF1 ENSGALG00000009692 46 0.93 - - - - - - - 0.930 - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
39. IL13RA2 ENSGALG00000020316 22 0.93 - - - - - - - 0.930 - - interleukin 13 receptor subunit alpha 2 [Source:NCBI gene;Acc:422219]
40. TBX3 ENSGALG00000036043 2888 0.928 - 0.928 - - - - - - - - T-box 3 [Source:NCBI gene;Acc:374202]
41. ABCC8 ENSGALG00000006172 41 0.919 - - - - 0.919 - - - - - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
42. SIX1 ENSGALG00000029401 526 0.917 - - - - - - - 0.917 - - SIX homeobox 1 [Source:NCBI gene;Acc:693262]
43. CABP2 ENSGALG00000037497 329 0.917 - - - - - - - 0.917 - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
44. ICOS ENSGALG00000008656 27 0.903 - - - - 0.903 - - - - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
45. PRICKLE1 ENSGALG00000009556 60 0.901 - - - - 0.901 - - - - - prickle planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:17019]
46. TM6SF1 ENSGALG00000006027 20 0.869 - - - - 0.869 - - - - - transmembrane 6 superfamily member 1 [Source:NCBI gene;Acc:415462]
47. CKMT2 ENSGALG00000015602 46 0.868 - - - - - - - 0.868 - - creatine kinase, mitochondrial 2 [Source:NCBI gene;Acc:396508]
48. ALDH6 ALDH6 771 0.865 - - - - - - 0.865 - - -
49. RAB44 ENSGALG00000000544 6 0.864 - - - - - - - 0.864 - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
50. GPM6A ENSGALG00000043480 2133 0.864 - - - - - - - 0.864 - - glycoprotein M6A [Source:NCBI gene;Acc:422569]
51. TRIM27.1 ENSGALG00000030397 19 0.864 - - - - - - - 0.864 - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
52. CDK19 ENSGALG00000015051 26 0.864 - - - - - - - 0.864 - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
53. PKDCCB ENSGALG00000011166 74 0.864 - - - - - - - 0.864 - - protein kinase domain containing, cytoplasmic b
54. GPR114 GPR114 46 0.864 - - - - - - - 0.864 - -
55. SAMD11 ENSGALG00000034453 43 0.864 - - - - - - - 0.864 - - sterile alpha motif domain containing 11 [Source:NCBI gene;Acc:419434]
56. GRIK4 ENSGALG00000006638 22 0.864 - - - - - - - 0.864 - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
57. IGHMBP2 ENSGALG00000004328 118 0.864 - - - - - - - 0.864 - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
58. ENSGALG00000001137 ENSGALG00000001137 0 0.864 - - - - - - - 0.864 - -
59. TIGD3 TIGD3 36 0.864 - - - - - - - 0.864 - -
60. SLC22A13 ENSGALG00000005934 8 0.864 - - - - - - - 0.864 - - solute carrier family 22 member 13
61. MSX2 ENSGALG00000038848 6950 0.86 - 0.860 - - - - - - - - msh homeobox 2 [Source:NCBI gene;Acc:395245]
62. ENTPD5 ENSGALG00000010202 69 0.857 - - - - 0.857 - - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
63. GGMOXR1 GGMOXR1 6734 0.851 - 0.851 - - - - - - - -
64. LAMA3 255 0.849 - 0.849 - - - - - - - - laminin subunit alpha 3, transcript variant X1
65. JADE1 ENSGALG00000010214 51 0.849 - - - - - - - 0.849 - - jade family PHD finger 1 [Source:HGNC Symbol;Acc:HGNC:30027]
66. MMP17 3885 0.847 - 0.847 - - - - - - - - matrix metallopeptidase 17
67. NKD1 ENSGALG00000003767 76 0.843 - - - - 0.843 - - - - - naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
68. ZPBP ENSGALG00000013083 26 0.838 - - - - 0.838 - - - - - zona pellucida binding protein [Source:NCBI gene;Acc:404537]
69. PAK3 ENSGALG00000008058 234 0.819 - - - - 0.819 - - - - - p21 (RAC1) activated kinase 3 [Source:HGNC Symbol;Acc:HGNC:8592]
70. PTBP3 ENSGALG00000015669 16 0.816 - - - - 0.816 - - - - - polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]
71. ATF6 ENSGALG00000032278 71 0.815 - - - - 0.815 - - - - - activating transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:791]
72. ENSGALG00000020700 ENSGALG00000020700 44 0.81 - - - - 0.810 - - - - -
73. NFAT5 ENSGALG00000039300 29 0.81 - - - - 0.810 - - - - - nuclear factor of activated T-cells 5 [Source:NCBI gene;Acc:415866]
74. FXYD2 ENSGALG00000007320 168 0.801 - - - - 0.801 - - - - - FXYD domain containing ion transport regulator 2 [Source:NCBI gene;Acc:419770]
75. ADNP2 ENSGALG00000035669 318 0.794 - - - - 0.794 - - - - - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
76. DLX5 ENSGALG00000009129 1395 0.794 - 0.794 - - - - - - - - distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
77. IRX6 ENSGALG00000023738 2 0.789 - - 0.789 - - - - - - - iroquois homeobox 6 [Source:HGNC Symbol;Acc:HGNC:14675]
78. MGST3 ENSGALG00000003445 50408 0.783 - - - - - 0.783 - - - - microsomal glutathione S-transferase 3 [Source:NCBI gene;Acc:424404]
79. CD44 ENSGALG00000039080 100 0.783 - 0.783 - - - - - - - - CD44 molecule (Indian blood group) [Source:NCBI gene;Acc:395666]
80. GRIA4 ENSGALG00000038995 29 0.781 - - 0.781 - - - - - - - glutamate ionotropic receptor AMPA type subunit 4 [Source:NCBI gene;Acc:396137]
81. CPN2 ENSGALG00000045776 18 0.781 - - 0.781 - - - - - - - carboxypeptidase N subunit 2
82. FAM102A ENSGALG00000005074 11 0.781 - - - - - - - 0.781 - - family with sequence similarity 102 member A [Source:NCBI gene;Acc:417228]
83. CNKSR3 ENSGALG00000027159 41 0.781 - - - - - - - 0.781 - - CNKSR family member 3, transcript variant X2
84. PRDM16 ENSGALG00000036728 934 0.777 - - - - - - - 0.777 - - PR/SET domain 16 [Source:HGNC Symbol;Acc:HGNC:14000]
85. GREM1 ENSGALG00000009724 70 0.767 - - - - - - - 0.767 - - gremlin 1, DAN family BMP antagonist [Source:NCBI gene;Acc:395826]
86. CYTL1 ENSGALG00000015015 4438 0.767 - - - - - 0.767 - - - - cytokine like 1 [Source:HGNC Symbol;Acc:HGNC:24435]
87. EVX1 ENSGALG00000037310 1974 0.765 - 0.765 - - - - - - - - even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]
88. GREB1 ENSGALG00000016455 12794 0.765 - 0.765 - - - - - - - - growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
89. WNT6 ENSGALG00000011358 1886 0.76 - 0.760 - - - - - - - - Wnt family member 6 [Source:NCBI gene;Acc:395235]
90. NRBP2 ENSGALG00000029760 1902 0.76 - - - - - 0.760 - - - - nuclear receptor binding protein 2 [Source:HGNC Symbol;Acc:HGNC:19339]
91. EDC4 ENSGALG00000040875 44 0.757 - - - - 0.757 - - - - - enhancer of mRNA decapping 4 [Source:HGNC Symbol;Acc:HGNC:17157]
92. DKK-1 DKK-1 146 0.757 - 0.757 - - - - - - - -
93. SCARA3 ENSGALG00000026651 2559 0.756 - - - - - - - 0.756 - - scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
94. TGFB2 ENSGALG00000009612 10223 0.755 - - - - - 0.755 - - - - transforming growth factor beta 2 [Source:NCBI gene;Acc:421352]
95. EPHX1L ENSGALG00000010303 16 0.753 - - - - 0.753 - - - - - epoxide hydrolase 1-like
96. MDGA2 ENSGALG00000012228 174 0.75 - - - - - - - 0.750 - - MAM domain containing glycosylphosphatidylinositol anchor 2 [Source:HGNC Symbol;Acc:HGNC:19835]
97. HMGXB3 ENSGALG00000005770 119 0.748 - - - - 0.748 - - - - - HMG-box containing 3 [Source:HGNC Symbol;Acc:HGNC:28982]
98. WT1 ENSGALG00000012115 3935 0.747 - - - - - - 0.747 - - - Wilms tumor 1 [Source:NCBI gene;Acc:101747322]
99. ENSGALG00000001138 ENSGALG00000001138 21 0.744 - - - - - 0.744 - - - -
100. BMP7 ENSGALG00000007668 6645 0.74 - 0.740 - - - - - - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]

There are 68 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA