Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HOXD11

Gene Name Gene ID Reads Annotation
HOXD11 ENSGALG00000039629 658 homeobox D11 [Source:NCBI gene;Acc:395328]











Genes with expression patterns similar to HOXD11

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HOXD11 ENSGALG00000039629 658 8 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 - 1.000 homeobox D11 [Source:NCBI gene;Acc:395328]
2. HOXD12 ENSGALG00000009274 637 2.412 0.759 0.865 - - - 0.788 - - - - homeobox D12 [Source:NCBI gene;Acc:396178]
3. ENSGALG00000005445 ENSGALG00000005445 16 2.358 - - - - 0.722 - - 0.716 - 0.920
4. RPUSD2 ENSGALG00000041216 9 1.934 - - - 0.939 - - - - - 0.995 RNA pseudouridylate synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]
5. AP3M1 ENSGALG00000005070 712 1.638 - - - - 0.899 - - - - 0.739 adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
6. PWP2 60 1.602 - - - - - - - 0.818 - 0.784 PWP2, small subunit processome component
7. CD8A ENSGALG00000015900, ENSGALG00000038559 1 1 - - - - 1.000 - - - - - Gallus gallus CD8a molecule (CD8A), mRNA. [Source:RefSeq mRNA;Acc:NM_001048080]
8. TNFRSF8 ENSGALG00000039741 6 1 - - - - 1.000 - - - - - TNF receptor superfamily member 8 [Source:NCBI gene;Acc:395090]
9. ATP6V0E1 10 1 - - - - - - - - - 1.000 ATPase H+ transporting V0 subunit e1
10. PANK3 ENSGALG00000001895 11 1 - - - - 1.000 - - - - - pantothenate kinase 3 [Source:HGNC Symbol;Acc:HGNC:19365]
11. CYP2H1 CYP2H1 363 1 - - - - - - - - - 1.000
12. TRAIL-LIKE ENSGALG00000007240 8 1 - - - - 1.000 - - - - - TNF-related apoptosis inducing ligand-like [Source:NCBI gene;Acc:395283]
13. ENSGALG00000016213 ENSGALG00000016213 33 1 - - - - - - - - - 1.000
14. CREB3 ENSGALG00000002523 23 1 - - - - 1.000 - - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
15. PPM1H ENSGALG00000009805 3 1 - - - - - - - - - 1.000 protein phosphatase, Mg2+/Mn2+ dependent 1H [Source:HGNC Symbol;Acc:HGNC:18583]
16. EXD3 30 1 - - - - 1.000 - - - - - exonuclease 3'-5' domain containing 3, transcript variant X23
17. ENSGALG00000026657 ENSGALG00000026657 4 1 - - - - - - - - - 1.000
18. CHRNA4 ENSGALG00000005801 5 1 - - - - 1.000 - - - - - cholinergic receptor nicotinic alpha 4 subunit [Source:NCBI gene;Acc:395606]
19. AGO2 ENSGALG00000040957 25 1 - - - - - - - - - 1.000 argonaute 2, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3263]
20. RP1L1 12 1 - - - - 1.000 - - - - - retinitis pigmentosa 1 like 1
21. LCAT ENSGALG00000028928 484 0.998 - - - - - - - - - 0.998 lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
22. KYNU ENSGALG00000012418 353 0.995 - - - - - - - - - 0.995 kynureninase, transcript variant X3
23. SLC12A8 ENSGALG00000012045 39 0.989 - - - - - - - - - 0.989 solute carrier family 12 member 8 [Source:HGNC Symbol;Acc:HGNC:15595]
24. WDR72 ENSGALG00000004545 5 0.989 - - - - - - - - - 0.989 WD repeat domain 72 [Source:HGNC Symbol;Acc:HGNC:26790]
25. DLX3 ENSGALG00000040529 37 0.988 - - - - - - - - - 0.988 Gallus gallus distal-less homeobox 3 (DLX3), mRNA. [Source:RefSeq mRNA;Acc:NM_204804]
26. C11H16ORF70 C11H16ORF70 7 0.985 - - - - - - - - - 0.985
27. NEIL3 ENSGALG00000010719 47 0.984 - - - - - - - - - 0.984 nei like DNA glycosylase 3 [Source:HGNC Symbol;Acc:HGNC:24573]
28. AGRP ENSGALG00000002244 27 0.982 - - - - - - - - - 0.982 agouti related neuropeptide [Source:NCBI gene;Acc:427535]
29. WDR41 ENSGALG00000004350 16 0.981 - - - - - - - - - 0.981 WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
30. JAKMIP1 ENSGALG00000015528 11 0.981 - - - - - - - - - 0.981 janus kinase and microtubule interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26460]
31. ADORA2B ENSGALG00000014182 26 0.979 - - - - - - - - - 0.979 adenosine A2b receptor [Source:NCBI gene;Acc:395971]
32. ST6GALNAC3 ENSGALG00000009027 17 0.974 - - - - - - - - - 0.974 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:19343]
33. UROC1 ENSGALG00000006306 75 0.974 - - - - - - - - - 0.974 urocanate hydratase 1 [Source:HGNC Symbol;Acc:HGNC:26444]
34. CNST ENSGALG00000010649 18 0.969 - - - - - - - - - 0.969 consortin, connexin sorting protein [Source:HGNC Symbol;Acc:HGNC:26486]
35. TPP1 52 0.969 - - - - - - - - - 0.969 tripeptidyl peptidase 1
36. ACSS1 ENSGALG00000008632 397 0.968 - - - - - - - - - 0.968 acyl-CoA synthetase short chain family member 1 [Source:HGNC Symbol;Acc:HGNC:16091]
37. ZBTB33 ENSGALG00000008611 15 0.958 - - - - 0.958 - - - - - zinc finger and BTB domain containing 33 [Source:HGNC Symbol;Acc:HGNC:16682]
38. HPD ENSGALG00000004343 244 0.955 - - - - - - - - - 0.955 4-hydroxyphenylpyruvate dioxygenase [Source:NCBI gene;Acc:416852]
39. LOC112532477 ENSGALG00000027520 40 0.95 - - - - - - - - - 0.950 fibrinogen-like protein 1-like protein
40. FAM13A ENSGALG00000010371 19 0.945 - - - - - - - - - 0.945 family with sequence similarity 13 member A [Source:HGNC Symbol;Acc:HGNC:19367]
41. FAM20C ENSGALG00000038768 31 0.941 - - - - 0.941 - - - - - FAM20C, golgi associated secretory pathway kinase [Source:HGNC Symbol;Acc:HGNC:22140]
42. BTBD2 ENSGALG00000001019 510 0.939 - - - 0.939 - - - - - - BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15504]
43. ENSGALG00000027565 ENSGALG00000027565 2 0.939 - - - 0.939 - - - - - -
44. GPR98 GPR98 22 0.939 - - - 0.939 - - - - - -
45. TMEM11 ENSGALG00000004749 206 0.939 - - - 0.939 - - - - - - transmembrane protein 11 [Source:NCBI gene;Acc:427663]
46. ENSGALG00000013912 ENSGALG00000013912 3 0.939 - - - 0.939 - - - - - -
47. LHFPL2 ENSGALG00000004437 500 0.939 - - - 0.939 - - - - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
48. DTX4 ENSGALG00000010835 25 0.939 - - - 0.939 - - - - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
49. CAV3 ENSGALG00000008351 16 0.939 - - - 0.939 - - - - - - caveolin 3 [Source:NCBI gene;Acc:378796]
50. ENSGALG00000006495 ENSGALG00000006495 4 0.939 - - - 0.939 - - - - - -
51. ENSGALG00000023046 ENSGALG00000023046 1 0.939 - - - 0.939 - - - - - -
52. WNT3A ENSGALG00000042657 22 0.939 - - - 0.939 - - - - - - Wnt family member 3A [Source:NCBI gene;Acc:395396]
53. WNT3 ENSGALG00000001079 8 0.939 - - - 0.939 - - - - - - Wnt family member 3 [Source:NCBI gene;Acc:374142]
54. ENSGALG00000027405 ENSGALG00000027405 1 0.939 - - - 0.939 - - - - - -
55. ENSGALG00000016141 ENSGALG00000016141 10 0.939 - - - - - - - - - 0.939
56. ASB7 ENSGALG00000007115 3 0.939 - - - 0.939 - - - - - - ankyrin repeat and SOCS box containing 7 [Source:NCBI gene;Acc:415518]
57. ENSGALG00000012250 ENSGALG00000012250 581 0.939 - - - - - - - - - 0.939
58. PLD5 ENSGALG00000010737 5 0.939 - - - 0.939 - - - - - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
59. LRRC47 7 0.939 - - - 0.939 - - - - - - leucine rich repeat containing 47
60. RAB11FIP5 1 0.939 - - - 0.939 - - - - - - RAB11 family interacting protein 5, transcript variant X1
61. KLHL14 ENSGALG00000036969 3 0.939 - - - 0.939 - - - - - - kelch like family member 14 [Source:NCBI gene;Acc:421100]
62. ENTPD7 ENSGALG00000023691 46 0.934 - - - - - - - - - 0.934 ectonucleoside triphosphate diphosphohydrolase 7 [Source:HGNC Symbol;Acc:HGNC:19745]
63. IL8 ENSGALG00000026098 16 0.931 - - - - 0.931 - - - - - interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
64. GPSM2 ENSGALG00000002090 50 0.93 - - - 0.930 - - - - - - G protein signaling modulator 2 [Source:HGNC Symbol;Acc:HGNC:29501]
65. HGF/SF HGF/SF 345 0.927 - - - - - - - - - 0.927
66. TMEM206 ENSGALG00000009822 80 0.927 - - - - - - - - - 0.927 transmembrane protein 206 [Source:HGNC Symbol;Acc:HGNC:25593]
67. TMEM9 ENSGALG00000000226 635 0.927 - - - - - - - - - 0.927 transmembrane protein 9 [Source:HGNC Symbol;Acc:HGNC:18823]
68. OLIG3 ENSGALG00000013862 51 0.925 - - - 0.925 - - - - - - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
69. DISP3 ENSGALG00000004662 146 0.919 - - - - - - - - - 0.919 dispatched RND transporter family member 3 [Source:NCBI gene;Acc:419497]
70. TNIP2 ENSGALG00000015666 28 0.919 - - - - - - - - - 0.919 TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
71. UIMC1 ENSGALG00000001158 22 0.914 - - - - - - - - - 0.914 ubiquitin interaction motif containing 1 [Source:HGNC Symbol;Acc:HGNC:30298]
72. TBC1D8B ENSGALG00000009040 75 0.914 - - - - - - - - - 0.914 TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
73. SORBS1 ENSGALG00000038722 1 0.91 - - - 0.910 - - - - - - sorbin and SH3 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14565]
74. MMACHC ENSGALG00000010234 77 0.908 - - - - - - - - - 0.908 methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:NCBI gene;Acc:424597]
75. GPC6 ENSGALG00000016900 13 0.905 - - - - - - - - - 0.905 glypican 6 [Source:HGNC Symbol;Acc:HGNC:4454]
76. ENSGALG00000018733 ENSGALG00000018733 175 0.898 - - - - - - - - - 0.898
77. CACNB2 ENSGALG00000008591 53 0.894 - - - - - - - - - 0.894 calcium voltage-gated channel auxiliary subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:1402]
78. SLC6A2 ENSGALG00000003560 108 0.893 - - - - - - - - - 0.893 solute carrier family 6 member 2 [Source:NCBI gene;Acc:395458]
79. LRRC8C ENSGALG00000006170 43 0.888 - - - - - - - - - 0.888 leucine rich repeat containing 8 VRAC subunit C [Source:HGNC Symbol;Acc:HGNC:25075]
80. WNT5B ENSGALG00000012998 35 0.885 - - - - - - - - - 0.885 Wnt family member 5B [Source:NCBI gene;Acc:418154]
81. DEF6 ENSGALG00000002615 1038 0.883 - - - - - - - - - 0.883 DEF6, guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:2760]
82. ZFAND3 ENSGALG00000010134 34 0.874 - - - - - - - - - 0.874 zinc finger AN1-type containing 3 [Source:HGNC Symbol;Acc:HGNC:18019]
83. MAPK1 ENSGALG00000001501 34 0.873 - - - - - - - - - 0.873 mitogen-activated protein kinase 1 [Source:NCBI gene;Acc:373953]
84. TJP3 ENSGALG00000000748 45 0.872 - - - - - - - - - 0.872 tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
85. PLXNB1 23 0.865 - - - 0.865 - - - - - - plexin B1, transcript variant X2
86. COL24A1 ENSGALG00000006864 161 0.864 - - - - - - - - - 0.864 collagen type XXIV alpha 1 chain, transcript variant X4
87. MFSD9 ENSGALG00000016792 40 0.849 - - - - - - - - - 0.849 major facilitator superfamily domain containing 9 [Source:HGNC Symbol;Acc:HGNC:28158]
88. FANCF ENSGALG00000003660 25 0.847 - - - - - - - - - 0.847 FA complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
89. BMF ENSGALG00000014537 64 0.842 - - - - - - - - - 0.842 Bcl2 modifying factor [Source:NCBI gene;Acc:769140]
90. ARV1 ENSGALG00000011155 38 0.841 - - - - - - - - - 0.841 ARV1 homolog, fatty acid homeostasis modulator [Source:HGNC Symbol;Acc:HGNC:29561]
91. RFX4 ENSGALG00000012647 119 0.839 - - - 0.839 - - - - - - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
92. DDX11 49 0.836 - - - - - - - 0.836 - - DEAD/H-box helicase 11, transcript variant X1
93. LMX1B ENSGALG00000040582 34 0.836 - - - - - - - 0.836 - - LIM homeobox transcription factor 1 beta [Source:NCBI gene;Acc:396312]
94. RAB13 RAB13 22 0.836 - - - - - - - 0.836 - -
95. TUB ENSGALG00000005986 85 0.836 - - - - - - - 0.836 - - tubby bipartite transcription factor [Source:HGNC Symbol;Acc:HGNC:12406]
96. ANKFN1 ENSGALG00000003105 15 0.836 - - - - - - - 0.836 - - ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
97. GGMOXR1 GGMOXR1 6734 0.831 - 0.831 - - - - - - - -
98. IL22RA1 ENSGALG00000004221 71 0.83 - - - - - - - - - 0.830 interleukin 22 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:13700]
99. LCOR ENSGALG00000028512 30 0.83 - - - - - - - - - 0.830 ligand dependent nuclear receptor corepressor, transcript variant X16
100. ARHGAP31 ENSGALG00000015077 19 0.827 - - - - - - - - - 0.827 Rho GTPase activating protein 31 [Source:HGNC Symbol;Acc:HGNC:29216]

There are 168 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA