Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HOXB5

Gene Name Gene ID Reads Annotation
HOXB5 ENSGALG00000034907 3646 homeobox B5 [Source:NCBI gene;Acc:425096]











Genes with expression patterns similar to HOXB5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HOXB5 ENSGALG00000034907 3646 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homeobox B5 [Source:NCBI gene;Acc:425096]
2. CHAMP1 ENSGALG00000016813 508 1.74 - - 0.913 - - - - - 0.827 - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
3. LRRC71 ENSGALG00000027351 695 1.696 - - 0.907 - - - - - 0.789 - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
4. DCP1B 1306 1.669 - - 0.875 - - - - - 0.794 - decapping mRNA 1B
5. APTX ENSGALG00000001954 692 1.667 - - 0.901 - - - - 0.766 - - aprataxin [Source:NCBI gene;Acc:395173]
6. YBX3 ENSGALG00000031890 819 1.622 - - 0.882 - - - - - 0.740 - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
7. SLC37A3 ENSGALG00000012849 836 1.602 - - 0.894 - - - - - 0.708 - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
8. C18orf8 C18orf8 1512 1.601 - - 0.894 - - - 0.707 - - -
9. ZDHHC7 ENSGALG00000042522 1774 1.584 - - 0.837 - - - - - 0.747 - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
10. RBBP8 ENSGALG00000014982 3255 1.576 - - 0.797 - - - - - 0.779 - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
11. PGS1 ENSGALG00000007181 3187 1.536 - - 0.733 - - - - - 0.803 - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
12. ADNP ENSGALG00000007989 1930 1.463 - - 0.723 - - - - 0.740 - - activity dependent neuroprotector homeobox [Source:HGNC Symbol;Acc:HGNC:15766]
13. AAMP ENSGALG00000011445 2528 1.447 - - 0.723 - - - - - 0.724 - angio associated migratory cell protein [Source:NCBI gene;Acc:769880]
14. MRPS33 ENSGALG00000028879 17966 0.939 - - 0.939 - - - - - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
15. AKT3 ENSGALG00000034081 866 0.935 - - 0.935 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]
16. ZNF385D ENSGALG00000011283 2578 0.93 - - 0.930 - - - - - - - zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]
17. TMEM242 ENSGALG00000013689 377 0.929 - - 0.929 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
18. RALGAPA2 240 0.927 - - 0.927 - - - - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
19. RFK ENSGALG00000033558 1364 0.926 - - 0.926 - - - - - - - riboflavin kinase, transcript variant X3
20. RECQL ENSGALG00000013174 1323 0.925 - - 0.925 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
21. ATF7IP ENSGALG00000011814 1571 0.922 - - 0.922 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
22. AMBRA1 ENSGALG00000008358 2865 0.921 - - 0.921 - - - - - - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
23. STXBP6 ENSGALG00000009847 224 0.921 - - 0.921 - - - - - - - syntaxin binding protein 6 [Source:NCBI gene;Acc:423299]
24. SELM SELM 6366 0.918 - - 0.918 - - - - - - -
25. IFT81 ENSGALG00000003854 2534 0.917 - - 0.917 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
26. LRRC42 ENSGALG00000010743 384 0.916 - - 0.916 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
27. BAG5 ENSGALG00000031062 4498 0.916 - - 0.916 - - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
28. PPME1 ENSGALG00000017312 2634 0.916 - - 0.916 - - - - - - - protein phosphatase methylesterase 1 [Source:NCBI gene;Acc:419058]
29. U4 U4 69 0.915 - - 0.915 - - - - - - -
30. GDPD4 ENSGALG00000000690 824 0.915 - - 0.915 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
31. STAMBP ENSGALG00000042555 1362 0.915 - - 0.915 - - - - - - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
32. RQCD1 RQCD1 110 0.914 - - 0.914 - - - - - - -
33. ENSGALG00000004703 ENSGALG00000004703 112 0.914 - - 0.914 - - - - - - -
34. RAD54L2 ENSGALG00000003243 187 0.913 - - 0.913 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
35. ENSGALG00000008689 ENSGALG00000008689 232 0.913 - - 0.913 - - - - - - -
36. CDC14B ENSGALG00000012627 110 0.913 - - 0.913 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
37. TCTN2 ENSGALG00000023683 3596 0.913 - - 0.913 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
38. GTF2H2 ENSGALG00000002399 2361 0.913 - - 0.913 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
39. MRC2 ENSGALG00000000461 48 0.912 - - 0.912 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
40. F2R ENSGALG00000014983 106 0.912 - - 0.912 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
41. RPS6KB1 ENSGALG00000005198 169 0.912 - - 0.912 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
42. ENSGALG00000028964 ENSGALG00000028964 46 0.912 - - 0.912 - - - - - - -
43. FBXL5 ENSGALG00000014510 245 0.912 - - 0.912 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
44. TDRD6 48 0.912 - - 0.912 - - - - - - - tudor domain containing 6
45. ENSGALG00000002020 ENSGALG00000002020 183 0.912 - - 0.912 - - - - - - -
46. ITGB4 ENSGALG00000002389 44 0.912 - - 0.912 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
47. PTDSS2 ENSGALG00000004300 682 0.911 - - 0.911 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
48. WAPAL WAPAL 625 0.911 - - 0.911 - - - - - - -
49. MAPRE3 ENSGALG00000031726 191 0.911 - - 0.911 - - - - - - - microtubule associated protein RP/EB family member 3 [Source:HGNC Symbol;Acc:HGNC:6892]
50. AKAP10 ENSGALG00000004679 103 0.91 - - 0.910 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
51. ENSGALG00000020103 ENSGALG00000020103 64 0.91 - - 0.910 - - - - - - -
52. OSGIN2 ENSGALG00000042840 83 0.91 - - 0.910 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
53. UEVLD ENSGALG00000006342 164 0.91 - - 0.910 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
54. MED12 ENSGALG00000036322 814 0.91 - - 0.910 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
55. NDUFC2 ENSGALG00000029172 26136 0.909 - - 0.909 - - - - - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
56. NXPE3 ENSGALG00000015344 111 0.909 - - 0.909 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
57. SZT2 ENSGALG00000028561 255 0.909 - - 0.909 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
58. ITM2B ENSGALG00000016996 1112 0.909 - - 0.909 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
59. CLEC16A ENSGALG00000007167 66 0.908 - - 0.908 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
60. DBN1 ENSGALG00000033405 216 0.908 - - 0.908 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
61. L3MBTL3 ENSGALG00000034030 113 0.908 - - 0.908 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
62. ABCE1 ENSGALG00000009961 958 0.908 - - 0.908 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
63. SLC3A1 ENSGALG00000009973 608 0.908 - - 0.908 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
64. SOBP ENSGALG00000043047 147 0.908 - - 0.908 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
65. ATP8B4 ENSGALG00000002326 456 0.908 - - 0.908 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
66. HPS5 ENSGALG00000027716 2466 0.908 - - 0.908 - - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
67. BBS5 ENSGALG00000009846 344 0.907 - - 0.907 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
68. NACAD 679 0.906 - - 0.906 - - - - - - - NAC alpha domain containing, transcript variant X1
69. ABCC3 ENSGALG00000007522 340 0.906 - - 0.906 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
70. TRIM13 ENSGALG00000017011 92 0.905 - - 0.905 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
71. RALGDS ENSGALG00000003412 4478 0.905 - - 0.905 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
72. RAB3IP ENSGALG00000009959 1652 0.905 - - 0.905 - - - - - - - RAB3A interacting protein, transcript variant X1
73. TUBGCP3 ENSGALG00000016836 332 0.903 - - 0.903 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
74. BBX ENSGALG00000015353 1281 0.903 - - 0.903 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
75. ADK ENSGALG00000005057 199 0.902 - - 0.902 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
76. KCTD3 ENSGALG00000009678 335 0.902 - - 0.902 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
77. CEP104 ENSGALG00000000978 1130 0.901 - - 0.901 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
78. PCDH17 ENSGALG00000016941 1006 0.901 - - 0.901 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
79. SMARCAD1 ENSGALG00000037339 149 0.901 - - 0.901 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
80. DUSP19 ENSGALG00000043268 5543 0.9 - - 0.900 - - - - - - - dual specificity phosphatase 19 [Source:HGNC Symbol;Acc:HGNC:18894]
81. SNX14 ENSGALG00000015831 2554 0.9 - - 0.900 - - - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
82. IFT57 ENSGALG00000015356 5540 0.899 - - 0.899 - - - - - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
83. AASDHPPT ENSGALG00000027981 1017 0.899 - - 0.899 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
84. PRUNE PRUNE 452 0.899 - - 0.899 - - - - - - -
85. TUBA4A ENSGALG00000000433 1367 0.899 - - 0.899 - - - - - - - tubulin alpha 4a
86. MLLT3 ENSGALG00000015078 502 0.898 - - 0.898 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
87. CA9 ENSGALG00000021340 1431 0.896 - - 0.896 - - - - - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
88. FAM134C 860 0.896 - - 0.896 - - - - - - - family with sequence similarity 134 member C
89. DAK DAK 13208 0.895 - - 0.895 - - - - - - -
90. PCYOX1 ENSGALG00000013878 2200 0.895 - - 0.895 - - - - - - - prenylcysteine oxidase 1 [Source:HGNC Symbol;Acc:HGNC:20588]
91. GFER ENSGALG00000005579 1367 0.894 - - 0.894 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
92. TAF1B ENSGALG00000016437 2318 0.893 - - 0.893 - - - - - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
93. VPS13D ENSGALG00000034777 2350 0.893 - - 0.893 - - - - - - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
94. POGZ ENSGALG00000036365 4056 0.892 - - 0.892 - - - - - - - pogo transposable element with ZNF domain, transcript variant X2
95. WHSC1 1712 0.891 - - 0.891 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
96. SLK ENSGALG00000008318 2220 0.891 - - 0.891 - - - - - - - STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
97. ATP10D ENSGALG00000014192 94 0.89 - - 0.890 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
98. TTPAL ENSGALG00000004244 2734 0.89 - - 0.890 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
99. PTCD3 ENSGALG00000015773 3059 0.89 - - 0.890 - - - - - - - pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]
100. FBXO45 ENSGALG00000037281 3936 0.889 - - 0.889 - - - - - - - F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]

There are 548 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA