Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HOXB4

Gene Name Gene ID Reads Annotation
HOXB4 ENSGALG00000000284 16 homeobox B4 [Source:NCBI gene;Acc:396230]











Genes with expression patterns similar to HOXB4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HOXB4 ENSGALG00000000284 16 6 - - 1.000 1.000 1.000 - 1.000 1.000 - 1.000 homeobox B4 [Source:NCBI gene;Acc:396230]
2. ENSGALG00000016732 ENSGALG00000016732 24 1.858 - - - - 0.870 - - 0.988 - -
3. LOC396098 ENSGALG00000015461 3 1.588 - - - - 0.814 - 0.774 - - - B6.1
4. MILR1 ENSGALG00000046212 7 1.575 - - - 0.701 - - - - - 0.874 mast cell immunoglobulin-like receptor 1, transcript variant X3
5. PDE6C ENSGALG00000006626 6 1 - - - - - - 1.000 - - - phosphodiesterase 6C [Source:NCBI gene;Acc:395834]
6. INTU ENSGALG00000010170 78 1 - - - - - - - 1.000 - - inturned planar cell polarity protein [Source:HGNC Symbol;Acc:HGNC:29239]
7. WNT9A ENSGALG00000005401 7 1 - - - - - - 1.000 - - - Wnt family member 9A [Source:NCBI gene;Acc:395829]
8. gga-mir-1652 ENSGALG00000025444 119 1 - - - - - - 1.000 - - - gga-mir-1652 [Source:miRBase;Acc:MI0007384]
9. AMER3 ENSGALG00000041501 5 1 - - - - - - 1.000 - - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
10. FAM120B ENSGALG00000011180 101 1 - - - - - - 1.000 - - - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
11. LPP ENSGALG00000007337 18 1 - - - - - - 1.000 - - - LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene;Acc:429148]
12. DDAH1 ENSGALG00000008663 8 1 - - - - - - 1.000 - - - dimethylarginine dimethylaminohydrolase 1 [Source:NCBI gene;Acc:378898]
13. SYTL2L ENSGALG00000008326 5 1 - - - - - - 1.000 - - - synaptotagmin-like protein 2-like, transcript variant X4
14. SNAPC4 ENSGALG00000044726 36 1 - - - - - - 1.000 - - - small nuclear RNA activating complex polypeptide 4 [Source:HGNC Symbol;Acc:HGNC:11137]
15. RBBP6_1 ENSGALG00000006043 26 1 - - - - - - 1.000 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
16. ENSGALG00000000789 ENSGALG00000000789 24 1 - - - - - - 1.000 - - -
17. ENSGALG00000018374 ENSGALG00000018374 3 1 - - - - - - 1.000 - - -
18. gga-mir-1801 ENSGALG00000025241 13 1 - - - - - - 1.000 - - - gga-mir-1801 [Source:miRBase;Acc:MI0007545]
19. ODF1 ENSGALG00000035199 32 1 - - - - - - 1.000 - - - outer dense fiber of sperm tails 1 [Source:HGNC Symbol;Acc:HGNC:8113]
20. STK31 ENSGALG00000010980 4 1 - - - - - - 1.000 - - - serine/threonine kinase 31 [Source:HGNC Symbol;Acc:HGNC:11407]
21. AGPAT2 ENSGALG00000023517 21 1 - - - - - - 1.000 - - - 1-acylglycerol-3-phosphate O-acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:325]
22. DNAI2 ENSGALG00000004495 45 1 - - - - - - 1.000 - - - dynein axonemal intermediate chain 2
23. DAZL ENSGALG00000011243 34 1 - - - - - - 1.000 - - - deleted in azoospermia like [Source:NCBI gene;Acc:374054]
24. DYL2 ENSGALG00000007147 35 1 - - - - - - - 1.000 - - dynein light chain 2 cytoplasmic
25. INTS3 8 1 - - - - - - 1.000 - - - integrator complex subunit 3, transcript variant X2
26. MBLAC2 ENSGALG00000014649 16 1 - - - - - - 1.000 - - - metallo-beta-lactamase domain containing 2 [Source:NCBI gene;Acc:431565]
27. KRT20 ENSGALG00000019716 11 1 - - - - - - 1.000 - - - keratin 20 [Source:NCBI gene;Acc:420045]
28. CYP39A1 ENSGALG00000016710 16 1 - - - - - - 1.000 - - - cytochrome P450 family 39 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:17449]
29. FAM26D ENSGALG00000014955 1 1 - - - - - - 1.000 - - - family with sequence similarity 26 member D
30. DZIP1L 45 1 - - - - - - - 1.000 - - DAZ interacting zinc finger protein 1 like, transcript variant X1
31. GBP ENSGALG00000026152 38 1 - - - - - - 1.000 - - - Gallus gallus guanylate binding protein (GBP), mRNA. [Source:RefSeq mRNA;Acc:NM_204652]
32. JMJD4 ENSGALG00000005417 10 1 - - - - - - 1.000 - - - jumonji domain containing 4 [Source:NCBI gene;Acc:420400]
33. BROX ENSGALG00000009413 15 0.997 - - - - - - - 0.997 - - BRO1 domain and CAAX motif containing [Source:HGNC Symbol;Acc:HGNC:26512]
34. MAP3K1 ENSGALG00000014718 60 0.997 - - - - - - - 0.997 - - mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
35. ENSGALG00000026351 ENSGALG00000026351 49 0.993 - - - - - - - 0.993 - -
36. NHLRC3 ENSGALG00000017037 6 0.988 - - - - - - - 0.988 - - NHL repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:33751]
37. KCTD15 ENSGALG00000004907 8 0.988 - - - - - - - 0.988 - - potassium channel tetramerization domain containing 15 [Source:HGNC Symbol;Acc:HGNC:23297]
38. ZNF385C ENSGALG00000003403 9 0.988 - - - - - - - 0.988 - - zinc finger protein 385C [Source:HGNC Symbol;Acc:HGNC:33722]
39. ANO9 ENSGALG00000004280 2 0.988 - - - - - - - 0.988 - - anoctamin 9 [Source:HGNC Symbol;Acc:HGNC:20679]
40. ACD ENSGALG00000044706 6 0.988 - - - - - - - 0.988 - - ACD, shelterin complex subunit and telomerase recruitment factor, transcript variant X4
41. C1orf101 C1orf101 1 0.988 - - - - - - - 0.988 - -
42. LRRK1 LRRK1 35 0.988 - - - - - - - 0.988 - -
43. MCMDC2 ENSGALG00000031863 3 0.988 - - - - - - - 0.988 - - minichromosome maintenance domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26368]
44. ENSGALG00000008069 ENSGALG00000008069 2 0.988 - - - - - - - 0.988 - -
45. SIM2 ENSGALG00000016044 5 0.988 - - - - - - - 0.988 - - SIM bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:10883]
46. ETV3 ENSGALG00000000669 7 0.988 - - - - - - - 0.988 - - ETS variant 3 [Source:HGNC Symbol;Acc:HGNC:3492]
47. GRXCR1 ENSGALG00000023032 4 0.988 - - - - - - - 0.988 - - glutaredoxin and cysteine rich domain containing 1 [Source:HGNC Symbol;Acc:HGNC:31673]
48. FBXL20 ENSGALG00000001682 2 0.988 - - - - - - - 0.988 - - F-box and leucine rich repeat protein 20 [Source:HGNC Symbol;Acc:HGNC:24679]
49. PCOLCE2 ENSGALG00000002623 8 0.988 - - - - - - - 0.988 - - procollagen C-endopeptidase enhancer 2 [Source:HGNC Symbol;Acc:HGNC:8739]
50. RANBP3L 19 0.988 - - - - - - - 0.988 - - RAN binding protein 3 like, transcript variant X2
51. NOG ENSGALG00000003114 12 0.988 - - - - - - - 0.988 - - noggin [Source:NCBI gene;Acc:373912]
52. NMU ENSGALG00000020151 29 0.988 - - - - - - - 0.988 - - neuromedin U [Source:NCBI gene;Acc:422748]
53. ARL6 ENSGALG00000019215 11 0.988 - - - - - - - 0.988 - - ADP ribosylation factor like GTPase 6 [Source:NCBI gene;Acc:418433]
54. FAM81A ENSGALG00000004103 8 0.988 - - - - - - - 0.988 - - family with sequence similarity 81 member A [Source:HGNC Symbol;Acc:HGNC:28379]
55. ZIC1 ENSGALG00000040532 6543 0.977 - - - - - - - 0.977 - - Zic family member 1 [Source:NCBI gene;Acc:374103]
56. RBPJL ENSGALG00000003952 131 0.967 - - - - - - - 0.967 - - recombination signal binding protein for immunoglobulin kappa J region like [Source:HGNC Symbol;Acc:HGNC:13761]
57. FLNB ENSGALG00000005678 68 0.955 - - - - - - - 0.955 - - filamin B [Source:NCBI gene;Acc:378913]
58. HTR4 ENSGALG00000001383 2 0.946 - - - - - - - 0.946 - - 5-hydroxytryptamine receptor 4 [Source:HGNC Symbol;Acc:HGNC:5299]
59. RPS6KA3 ENSGALG00000016406 24 0.942 - - - - - - 0.942 - - - ribosomal protein S6 kinase A3 [Source:HGNC Symbol;Acc:HGNC:10432]
60. LARP4B ENSGALG00000006672 57 0.935 - - - - - - - 0.935 - - La ribonucleoprotein domain family member 4B [Source:HGNC Symbol;Acc:HGNC:28987]
61. DNAJC30 150 0.931 - - - - - - - 0.931 - - DnaJ heat shock protein family (Hsp40) member C30, transcript variant X1
62. COL4A3BP ENSGALG00000014952 96 0.914 - - - - - - - 0.914 - - collagen type IV alpha 3 binding protein [Source:HGNC Symbol;Acc:HGNC:2205]
63. PHYKPL ENSGALG00000023920 6 0.908 - - - - - - - 0.908 - - 5-phosphohydroxy-L-lysine phospho-lyase [Source:HGNC Symbol;Acc:HGNC:28249]
64. ENSGALG00000026668 ENSGALG00000026668 34 0.907 - - - - 0.907 - - - - -
65. KANSL1L ENSGALG00000002866 44 0.905 - - - - - - - 0.905 - - KAT8 regulatory NSL complex subunit 1-like, transcript variant X1
66. SERPINB1 ENSGALG00000019555 29 0.887 - - - - - - - 0.887 - - serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311]
67. NFATC3 ENSGALG00000003396 40 0.878 - - - - - - - 0.878 - - nuclear factor of activated T cells 3 [Source:HGNC Symbol;Acc:HGNC:7777]
68. KIAA1958 ENSGALG00000023083 1 0.874 - - - - - - - - - 0.874 KIAA1958 [Source:HGNC Symbol;Acc:HGNC:23427]
69. CABP7 ENSGALG00000040463 1 0.874 - - - - - - - - - 0.874 calcium binding protein 7 [Source:HGNC Symbol;Acc:HGNC:20834]
70. UROS ENSGALG00000013688 10 0.874 - - - - - - - - - 0.874 uroporphyrinogen III synthase [Source:HGNC Symbol;Acc:HGNC:12592]
71. CDCP2 ENSGALG00000010752 4 0.874 - - - - - - - - - 0.874 CUB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:27297]
72. ENSGALG00000025761 ENSGALG00000025761 6 0.874 - - - - - - - - - 0.874
73. PELI2 ENSGALG00000012124 7 0.874 - - - - - - - - - 0.874 pellino E3 ubiquitin protein ligase family member 2 [Source:HGNC Symbol;Acc:HGNC:8828]
74. EMID1 4 0.874 - - - - - - - - - 0.874 EMI domain containing 1, transcript variant X5
75. PRIMA1 ENSGALG00000020392 13 0.874 - - - - - - - - - 0.874 proline rich membrane anchor 1 [Source:NCBI gene;Acc:772317]
76. SLC30A2 ENSGALG00000010375 44 0.874 - - - - - - - - - 0.874 solute carrier family 30 member 2 [Source:HGNC Symbol;Acc:HGNC:11013]
77. gga-mir-196-1 ENSGALG00000018313 2 0.874 - - - - - - - - - 0.874 gga-mir-196-1 [Source:miRBase;Acc:MI0001268]
78. CILP ENSGALG00000007358 20 0.874 - - - - - - - - - 0.874 cartilage intermediate layer protein [Source:HGNC Symbol;Acc:HGNC:1980]
79. CNGA3 ENSGALG00000039826 3 0.874 - - - - - - - - - 0.874 cyclic nucleotide gated channel alpha 3 [Source:NCBI gene;Acc:396144]
80. HINT2 ENSGALG00000027418 10 0.874 - - - - - - - - - 0.874 histidine triad nucleotide binding protein 2 [Source:HGNC Symbol;Acc:HGNC:18344]
81. IL4I1 ENSGALG00000000081 1 0.874 - - - - - - - - - 0.874 interleukin 4 induced 1 [Source:NCBI gene;Acc:417039]
82. ENSGALG00000023526 ENSGALG00000023526 10 0.874 - - - - - - - - - 0.874
83. FRMD6 ENSGALG00000012374 1 0.874 - - - - - - - - - 0.874 FERM domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19839]
84. ENSGALG00000023704 ENSGALG00000023704 2 0.874 - - - - - - - - - 0.874
85. ENSGALG00000027018 ENSGALG00000027018 12 0.874 - - - - - - - - - 0.874
86. ENSGALG00000029114 ENSGALG00000029114 4 0.874 - - - - - - - - - 0.874
87. AMZ1 ENSGALG00000004358 2 0.874 - - - - - - - - - 0.874 archaelysin family metallopeptidase 1
88. ENSGALG00000028531 ENSGALG00000028531 2 0.874 - - - - - - - - - 0.874
89. LRMP ENSGALG00000014011 2 0.874 - - - - - - - - - 0.874 lymphoid restricted membrane protein [Source:HGNC Symbol;Acc:HGNC:6690]
90. SNORA50 SNORA50 9 0.874 - - - - - - - - - 0.874
91. TRPM1 ENSGALG00000003849 5 0.874 - - - - - - - - - 0.874 transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
92. DNM3 ENSGALG00000033244 6 0.869 - - - - - - - 0.869 - - dynamin 3 [Source:HGNC Symbol;Acc:HGNC:29125]
93. TTC39C ENSGALG00000015064 201 0.867 - - - - - - - 0.867 - - tetratricopeptide repeat domain 39C [Source:HGNC Symbol;Acc:HGNC:26595]
94. EFCAB6 ENSGALG00000014188 139 0.861 - - - - - - 0.861 - - - EF-hand calcium binding domain 6, transcript variant X3
95. KCTD18 ENSGALG00000008155 26 0.858 - - - - - - - 0.858 - - potassium channel tetramerization domain containing 18 [Source:HGNC Symbol;Acc:HGNC:26446]
96. ENSGALG00000025727 ENSGALG00000025727 26 0.858 - - - - - - - - - 0.858
97. SERINC3 ENSGALG00000004220 33 0.85 - - - - - - - 0.850 - - serine incorporator 3 [Source:NCBI gene;Acc:419196]
98. ABHD2 ENSGALG00000006689 29 0.848 - - - - - - - 0.848 - - abhydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18717]
99. ST6GAL2 ENSGALG00000016803 24 0.847 - - - - 0.847 - - - - - ST6 beta-galactoside alpha-2,6-sialyltransferase 2 [Source:NCBI gene;Acc:403122]
100. CDK17 ENSGALG00000011456 478 0.844 - - - - - - - 0.844 - - cyclin dependent kinase 17 [Source:HGNC Symbol;Acc:HGNC:8750]

There are 99 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA