Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for HOXB2

Gene Name Gene ID Reads Annotation
HOXB2 ENSGALG00000025774 5280 homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]











Genes with expression patterns similar to HOXB2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HOXB2 ENSGALG00000025774 5280 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
2. TUBB2B ENSGALG00000012821 41535 1.623 - - - - - - 0.890 - - 0.733 tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
3. FZD3 ENSGALG00000042308 3356 1.515 - - - - - 0.753 - - - 0.762 frizzled class receptor 3 [Source:NCBI gene;Acc:395572]
4. CKB ENSGALG00000011511 2100 1.501 - - - - - 0.800 - - - 0.701 creatine kinase B [Source:NCBI gene;Acc:396248]
5. DCLK2 ENSGALG00000032386 2253 1.471 - - - - - 0.747 - - - 0.724 doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
6. NDUFS5 ENSGALG00000003625 27698 0.999 - - - - - - 0.999 - - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
7. SSR2 ENSGALG00000000764 32190 0.999 - - - - - - 0.999 - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
8. NUP153 ENSGALG00000012720 8079 0.999 - - - - - - 0.999 - - - nucleoporin 153 [Source:HGNC Symbol;Acc:HGNC:8062]
9. MEX3A ENSGALG00000014016 3692 0.999 - - - - - - 0.999 - - - mex-3 RNA binding family member A [Source:HGNC Symbol;Acc:HGNC:33482]
10. ACVR1 ENSGALG00000037301 6448 0.998 - - - - - - 0.998 - - - activin A receptor type 1 [Source:NCBI gene;Acc:395246]
11. AMFR ENSGALG00000003107 6560 0.997 - - - - - - 0.997 - - - autocrine motility factor receptor [Source:HGNC Symbol;Acc:HGNC:463]
12. IFT57 ENSGALG00000015356 5540 0.997 - - - - - - 0.997 - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
13. NUP188 ENSGALG00000043394 9288 0.997 - - - - - - 0.997 - - - nucleoporin 188 [Source:NCBI gene;Acc:417198]
14. TCF21 ENSGALG00000029024 8252 0.997 - - - - - - 0.997 - - - transcription factor 21 [Source:NCBI gene;Acc:421697]
15. MSH6 ENSGALG00000008957 6396 0.997 - - - - - - 0.997 - - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
16. ANAPC2 ENSGALG00000008625 8822 0.997 - - - - - - 0.997 - - - anaphase promoting complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:19989]
17. RNF126 ENSGALG00000042948 4724 0.997 - - - - - - 0.997 - - - ring finger protein 126 [Source:NCBI gene;Acc:420085]
18. EMC1 ENSGALG00000003969 6876 0.997 - - - - - - 0.997 - - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
19. FBXL21 ENSGALG00000006327 2910 0.997 - - - - - - 0.997 - - - F-box and leucine rich repeat protein 21 [Source:NCBI gene;Acc:416306]
20. HIBCH ENSGALG00000043307 11990 0.997 - - - - - - 0.997 - - - 3-hydroxyisobutyryl-CoA hydrolase [Source:NCBI gene;Acc:423979]
21. KDM4B ENSGALG00000034592 6711 0.997 - - - - - - 0.997 - - - lysine demethylase 4B, transcript variant X8
22. MIPEP ENSGALG00000017118 8666 0.997 - - - - - - 0.997 - - - mitochondrial intermediate peptidase [Source:HGNC Symbol;Acc:HGNC:7104]
23. NUP133 ENSGALG00000011091 3804 0.997 - - - - - - 0.997 - - - nucleoporin 133 [Source:HGNC Symbol;Acc:HGNC:18016]
24. SPAG1 ENSGALG00000033254 1370 0.997 - - - - - - 0.997 - - - sperm associated antigen 1 [Source:HGNC Symbol;Acc:HGNC:11212]
25. ZNF384 ENSGALG00000032599 2369 0.997 - - - - - - 0.997 - - - zinc finger protein 384 [Source:NCBI gene;Acc:770350]
26. MAMDC2 ENSGALG00000015115 1512 0.997 - - - - - - 0.997 - - - MAM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23673]
27. ZNF367 ENSGALG00000012629 3215 0.997 - - - - - - 0.997 - - - zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]
28. NTPCR ENSGALG00000011015 8652 0.997 - - - - - - 0.997 - - - nucleoside-triphosphatase, cancer-related [Source:NCBI gene;Acc:428588]
29. SP4 ENSGALG00000039454 5597 0.997 - - - - - - 0.997 - - - Sp4 transcription factor [Source:HGNC Symbol;Acc:HGNC:11209]
30. RWDD3 ENSGALG00000038421 10909 0.996 - - - - - - 0.996 - - - RWD domain containing 3 [Source:NCBI gene;Acc:424481]
31. FAM174A ENSGALG00000026203 8369 0.996 - - - - - - 0.996 - - - family with sequence similarity 174 member A [Source:HGNC Symbol;Acc:HGNC:24943]
32. AP1G1 12403 0.996 - - - - - - 0.996 - - - adaptor related protein complex 1 gamma 1 subunit, transcript variant X2
33. SLC12A4 ENSGALG00000034179 5674 0.996 - - - - - - 0.996 - - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
34. PRIM2 ENSGALG00000016278 5160 0.995 - - - - - - 0.995 - - - DNA primase subunit 2 [Source:NCBI gene;Acc:421878]
35. USP9X ENSGALG00000016236 9419 0.995 - - - - - - 0.995 - - - ubiquitin specific peptidase 9, X-linked, transcript variant X3
36. PSMD14 ENSGALG00000011128 13335 0.995 - - - - - - 0.995 - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
37. CDH3 5050 0.995 - - - - - - 0.995 - - - cadherin 3
38. SMARCD2 ENSGALG00000029304 11867 0.995 - - - - - - 0.995 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]
39. OAZ2 ENSGALG00000036288 13213 0.995 - - - - - - 0.995 - - - Gallus gallus ornithine decarboxylase antizyme 2 (OAZ2), mRNA. [Source:RefSeq mRNA;Acc:NM_001142862]
40. RBPMS_1 ENSGALG00000010291 16146 0.994 - - - - - - 0.994 - - - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
41. NANS ENSGALG00000015320 10552 0.994 - - - - - - 0.994 - - - N-acetylneuraminate synthase [Source:NCBI gene;Acc:427283]
42. BTBD1 ENSGALG00000006020 14157 0.993 - - - - - - 0.993 - - - BTB domain containing 1 [Source:NCBI gene;Acc:415461]
43. SPC25 ENSGALG00000010900 14238 0.993 - - - - - - 0.993 - - - SPC25, NDC80 kinetochore complex component [Source:NCBI gene;Acc:424172]
44. MRPL21 ENSGALG00000004362 20796 0.991 - - - - - - 0.991 - - - mitochondrial ribosomal protein L21 [Source:NCBI gene;Acc:423000]
45. HOXA4 ENSGALG00000022622 22327 0.989 - - - - - - 0.989 - - - homeobox A4 [Source:NCBI gene;Acc:395307]
46. THG1L ENSGALG00000003722 7497 0.988 - - - - - - 0.988 - - - tRNA-histidine guanylyltransferase 1 like [Source:NCBI gene;Acc:416242]
47. ZC3H15 ENSGALG00000041857 19808 0.986 - - - - - - 0.986 - - - zinc finger CCCH-type containing 15 [Source:NCBI gene;Acc:423992]
48. NDUFB5 ENSGALG00000009076 32963 0.984 - - - - - - 0.984 - - - NADH:ubiquinone oxidoreductase subunit B5 [Source:NCBI gene;Acc:424978]
49. AKAP12 ENSGALG00000036240 64617 0.979 - - - - - - 0.979 - - - A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
50. EIF3A ENSGALG00000009328 39982 0.977 - - - - - - 0.977 - - - eukaryotic translation initiation factor 3 subunit A [Source:HGNC Symbol;Acc:HGNC:3271]
51. ERLIN2 ENSGALG00000003092 18251 0.976 - - - - - - 0.976 - - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
52. PPP2CA ENSGALG00000006462 26306 0.969 - - - - - - 0.969 - - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
53. COX6A1 ENSGALG00000007205 72629 0.953 - - - - - - 0.953 - - - cytochrome c oxidase subunit 6A1 [Source:NCBI gene;Acc:416978]
54. ZBTB16 ENSGALG00000038540 5544 0.881 - - - - - 0.881 - - - - Gallus gallus zinc finger and BTB domain containing 32 (ZBTB32), mRNA. [Source:RefSeq mRNA;Acc:NM_001321488]
55. ZNF207 ENSGALG00000003454 47086 0.856 - - - - - - 0.856 - - - zinc finger protein 207 [Source:HGNC Symbol;Acc:HGNC:12998]
56. MARCKSL1 ENSGALG00000032335 88728 0.851 - - - - - 0.851 - - - - MARCKS like 1 [Source:NCBI gene;Acc:770764]
57. ALDOC ENSGALG00000026077 106910 0.846 - - - - - 0.846 - - - - aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
58. NEFL ENSGALG00000000314 4883 0.829 - - - - - 0.829 - - - - neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
59. OPTC ENSGALG00000003554 3698 0.826 - - - - - 0.826 - - - - opticin [Source:NCBI gene;Acc:395130]
60. CSPG5 ENSGALG00000032184 991 0.822 - - - - - 0.822 - - - - chondroitin sulfate proteoglycan 5 [Source:NCBI gene;Acc:395466]
61. COL14A1 ENSGALG00000037675 2652 0.808 - - - - - 0.808 - - - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
62. NEFM ENSGALG00000000317 6992 0.805 - - - - - 0.805 - - - - neurofilament medium [Source:NCBI gene;Acc:396206]
63. IFI27L2 1365 0.802 - - 0.802 - - - - - - - interferon, alpha-inducible protein 27-like 2, transcript variant X4
64. CRABP-I ENSGALG00000003193 67258 0.799 - - - - - 0.799 - - - - cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
65. LFNG ENSGALG00000038515 5178 0.798 - - - - - 0.798 - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
66. RPL10A ENSGALG00000002644 166422 0.797 - - - - - - 0.797 - - - ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
67. SDF4 ENSGALG00000001872 6382 0.792 - - - - - - - 0.792 - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
68. CNDP2 ENSGALG00000019514 19531 0.791 - - - - - - 0.791 - - - carnosine dipeptidase 2 [Source:NCBI gene;Acc:421013]
69. GRM4 ENSGALG00000002840 2250 0.788 - - - - - 0.788 - - - - glutamate receptor, metabotropic 4, transcript variant X2
70. ENSGALG00000022967 ENSGALG00000022967 240 0.787 - - - - - 0.787 - - - -
71. JOSD1 ENSGALG00000041766 1445 0.782 - - - - - - - 0.782 - - Josephin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28953]
72. CERCAM ENSGALG00000004986 5158 0.781 - - - - - 0.781 - - - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
73. FABP7 ENSGALG00000038933 6780 0.774 - - - - - 0.774 - - - - fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
74. SLC35F1 ENSGALG00000029011 14728 0.771 - - - - - 0.771 - - - - solute carrier family 35 member F1 [Source:HGNC Symbol;Acc:HGNC:21483]
75. WSCD2 ENSGALG00000004849 477 0.767 - - - - - 0.767 - - - - WSC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29117]
76. TRIM37 ENSGALG00000005084 4036 0.767 - - 0.767 - - - - - - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
77. MSRA ENSGALG00000028032 2607 0.764 - - 0.764 - - - - - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
78. IVD ENSGALG00000040267 5820 0.762 - - 0.762 - - - - - - - isovaleryl-CoA dehydrogenase [Source:NCBI gene;Acc:423011]
79. ISCU ENSGALG00000004869 6852 0.762 - - 0.762 - - - - - - - iron-sulfur cluster assembly enzyme [Source:HGNC Symbol;Acc:HGNC:29882]
80. SLU7 ENSGALG00000034414 5386 0.761 - - 0.761 - - - - - - - SLU7 homolog, splicing factor [Source:NCBI gene;Acc:416157]
81. ZIC1 ENSGALG00000040532 6543 0.759 - - - - - 0.759 - - - - Zic family member 1 [Source:NCBI gene;Acc:374103]
82. SETBP1 ENSGALG00000036775 6448 0.759 - - - - - 0.759 - - - - SET binding protein 1 [Source:HGNC Symbol;Acc:HGNC:15573]
83. HES5 ENSGALG00000001141 6514 0.757 - - - - - 0.757 - - - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
84. CIDEC ENSGALG00000026945 718 0.757 - - 0.757 - - - - - - - cell death inducing DFFA like effector c [Source:NCBI gene;Acc:100859733]
85. XPC ENSGALG00000006357 2484 0.755 - - - 0.755 - - - - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
86. KIAA0196 KIAA0196 4011 0.754 - - 0.754 - - - - - - -
87. DLL1 ENSGALG00000011182 1613 0.754 - - - - - 0.754 - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
88. WDR11 ENSGALG00000035013 3393 0.754 - - 0.754 - - - - - - - WD repeat domain 11 [Source:HGNC Symbol;Acc:HGNC:13831]
89. GNS ENSGALG00000009856 3045 0.752 - - 0.752 - - - - - - - glucosamine (N-acetyl)-6-sulfatase [Source:NCBI gene;Acc:417829]
90. Sep-02 Sep-02 206 0.75 - - 0.750 - - - - - - -
91. STRA6 ENSGALG00000001449 8248 0.749 - - - - - - - 0.749 - - stimulated by retinoic acid 6 [Source:NCBI gene;Acc:415301]
92. RFX4 ENSGALG00000012647 119 0.747 - - - - - - - - - 0.747 regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
93. VPS8 ENSGALG00000006704 5419 0.746 - - - - - - - 0.746 - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
94. NSG1 ENSGALG00000015010 5829 0.746 - - - - - 0.746 - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
95. LDHB ENSGALG00000035836 169726 0.745 - - - - - 0.745 - - - - lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
96. LMO4 ENSGALG00000006252 3686 0.745 - - 0.745 - - - - - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
97. TMEM38B ENSGALG00000027472 2465 0.745 - - 0.745 - - - - - - - transmembrane protein 38B [Source:HGNC Symbol;Acc:HGNC:25535]
98. IBTK ENSGALG00000015864 3154 0.743 - - 0.743 - - - - - - - inhibitor of Bruton tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:17853]
99. PLSCR1 ENSGALG00000006805 1220 0.742 - - - - - - - 0.742 - - phospholipid scramblase 1 [Source:HGNC Symbol;Acc:HGNC:9092]
100. ENTPD5 ENSGALG00000010202 69 0.742 - - 0.742 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]

There are 130 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA