Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HOXB13

Gene Name Gene ID Reads Annotation
HOXB13 ENSGALG00000033154 71 homeobox B13 [Source:HGNC Symbol;Acc:HGNC:5112]











Genes with expression patterns similar to HOXB13

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HOXB13 ENSGALG00000033154 71 4 - - 1.000 - 1.000 1.000 1.000 - - - homeobox B13 [Source:HGNC Symbol;Acc:HGNC:5112]
2. PIK3R4 ENSGALG00000040917 10 1.901 - - - - - 0.901 1.000 - - - phosphoinositide-3-kinase regulatory subunit 4 [Source:HGNC Symbol;Acc:HGNC:8982]
3. GAK ENSGALG00000015352 99 1.643 - - 0.742 - - 0.901 - - - - cyclin G associated kinase [Source:HGNC Symbol;Acc:HGNC:4113]
4. CXADR ENSGALG00000015701 96 1.593 - - 0.886 - - 0.707 - - - - coxsackie virus and adenovirus receptor, transcript variant X2
5. TMEM62 ENSGALG00000009260 1170 1.521 - - - - 0.701 0.820 - - - - transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
6. GRHL3 ENSGALG00000004249 1 1 - - - - - - 1.000 - - - grainyhead like transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:25839]
7. GABARAPL3 GABARAPL3 32 1 - - - - - - 1.000 - - -
8. MIER3 ENSGALG00000014721 57 1 - - - - - - 1.000 - - - MIER family member 3, transcript variant X6
9. STEAP4 ENSGALG00000008997 8 1 - - - - - - 1.000 - - - STEAP4 metalloreductase [Source:HGNC Symbol;Acc:HGNC:21923]
10. SULT1B ENSGALG00000023122 7 1 - - - - - - 1.000 - - - sulfotransferase family, cytosolic, 1B [Source:NCBI gene;Acc:422661]
11. ENSGALG00000007388 ENSGALG00000007388 41 1 - - - - - - 1.000 - - -
12. FAM83H ENSGALG00000033118 50 1 - - - - - - 1.000 - - - family with sequence similarity 83 member H [Source:HGNC Symbol;Acc:HGNC:24797]
13. CNKSR3 ENSGALG00000027159 41 1 - - - - - - 1.000 - - - CNKSR family member 3, transcript variant X2
14. MAP2K1 ENSGALG00000007687 250 1 - - - - - - 1.000 - - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
15. CDH20 ENSGALG00000012906 2 1 - - - - - - 1.000 - - - cadherin 20, type 2 [Source:NCBI gene;Acc:373927]
16. BROX ENSGALG00000009413 15 1 - - - - - - 1.000 - - - BRO1 domain and CAAX motif containing [Source:HGNC Symbol;Acc:HGNC:26512]
17. SNCB ENSGALG00000021542 19 1 - - - - - - 1.000 - - - synuclein beta [Source:NCBI gene;Acc:395391]
18. PTPRD ENSGALG00000015058 37 1 - - - - - - 1.000 - - - protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
19. C2CD3 ENSGALG00000017314 13 1 - - - - - - 1.000 - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
20. TUSC5 15 1 - - - - - - 1.000 - - - tumor suppressor candidate 5
21. DSG2 ENSGALG00000015142 67 1 - - - - - - 1.000 - - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
22. RGS13 ENSGALG00000026810 8 1 - - - - - - 1.000 - - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
23. DMB1 ENSGALG00000000162 7 1 - - - - - - 1.000 - - - major histocompatibility complex, class II, DM beta 1 [Source:NCBI gene;Acc:106182184]
24. DRG11 DRG11 32 1 - - - - - - 1.000 - - -
25. LOC422320 ENSGALG00000007703 6 1 - - - - - - 1.000 - - - ligand of Numb protein X 2-like, transcript variant X1
26. PLCZ1 ENSGALG00000013123 3 1 - - - - - - 1.000 - - - phospholipase C zeta 1 [Source:NCBI gene;Acc:418182]
27. STRADB ENSGALG00000008373 10 1 - - - - - - 1.000 - - - STE20-related kinase adaptor beta [Source:HGNC Symbol;Acc:HGNC:13205]
28. PAPPA ENSGALG00000007079 6 1 - - - - - - 1.000 - - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
29. PFKFB4 ENSGALG00000002099, ENSGALG00000032385 30 1 - - - - - - 1.000 - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:HGNC Symbol;Acc:HGNC:8875]
30. PCDHA11 58 1 - - - - - - 1.000 - - - protocadherin alpha 11
31. ENSGALG00000026418 ENSGALG00000026418 2 1 - - - - - - 1.000 - - -
32. SEMA4D ENSGALG00000010697 10 1 - - - - - - 1.000 - - - semaphorin 4D [Source:NCBI gene;Acc:396331]
33. MYNN ENSGALG00000009409 11 1 - - - - - - 1.000 - - - myoneurin [Source:HGNC Symbol;Acc:HGNC:14955]
34. CLCNKB ENSGALG00000003713 27 1 - - - - - - 1.000 - - - chloride voltage-gated channel Kb, transcript variant X3
35. PI15 ENSGALG00000029264 21 1 - - - - - - 1.000 - - - peptidase inhibitor 15 [Source:NCBI gene;Acc:374241]
36. SLC44A1 ENSGALG00000015439 32 1 - - - - - - 1.000 - - - solute carrier family 44 member 1 [Source:HGNC Symbol;Acc:HGNC:18798]
37. uc_6 uc_6 14 1 - - - - - - 1.000 - - -
38. KIAA1377 KIAA1377 48 1 - - - - - - 1.000 - - -
39. GPD1L2 ENSGALG00000012061 31 0.982 - - 0.982 - - - - - - - glycerol-3-phosphate dehydrogenase 1-like 2
40. GAN ENSGALG00000013437 11 0.982 - - 0.982 - - - - - - - gigaxonin [Source:HGNC Symbol;Acc:HGNC:4137]
41. FHL2 ENSGALG00000016797 11 0.982 - - 0.982 - - - - - - - four and a half LIM domains 2 [Source:HGNC Symbol;Acc:HGNC:3703]
42. TLL2 ENSGALG00000005519 10 0.982 - - 0.982 - - - - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
43. ENSGALG00000026347 ENSGALG00000026347 2 0.982 - - 0.982 - - - - - - -
44. LRP3 ENSGALG00000004853 13 0.982 - - 0.982 - - - - - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
45. CNGA2 ENSGALG00000007282 2 0.982 - - 0.982 - - - - - - - cyclic nucleotide gated channel alpha 2 [Source:HGNC Symbol;Acc:HGNC:2149]
46. CLRN2 ENSGALG00000027453 3 0.982 - - 0.982 - - - - - - - clarin 2 [Source:HGNC Symbol;Acc:HGNC:33939]
47. ZMAT4 ENSGALG00000003470 2 0.982 - - 0.982 - - - - - - - zinc finger matrin-type 4 [Source:HGNC Symbol;Acc:HGNC:25844]
48. SNX8 ENSGALG00000004255 4 0.982 - - 0.982 - - - - - - - sorting nexin 8 [Source:HGNC Symbol;Acc:HGNC:14972]
49. POMGNT2 ENSGALG00000011518 36 0.982 - - 0.982 - - - - - - - protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) [Source:NCBI gene;Acc:428446]
50. LOXHD1 ENSGALG00000037829 3 0.982 - - 0.982 - - - - - - - lipoxygenase homology domains 1 [Source:HGNC Symbol;Acc:HGNC:26521]
51. TNFAIP3 ENSGALG00000013861 11 0.982 - - 0.982 - - - - - - - TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
52. ENSGALG00000009041 ENSGALG00000009041 27 0.982 - - 0.982 - - - - - - -
53. LRRC49 ENSGALG00000004059 29 0.978 - - 0.978 - - - - - - - leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
54. SYCP1 ENSGALG00000002511 13 0.967 - - 0.967 - - - - - - - synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]
55. SLC17A6 ENSGALG00000039254 16 0.966 - - 0.966 - - - - - - - solute carrier family 17 member 6 [Source:NCBI gene;Acc:422971]
56. U4atac U4atac 23 0.959 - - 0.959 - - - - - - -
57. CALR3 ENSGALG00000003914 8 0.951 - - 0.951 - - - - - - - calreticulin 3 [Source:HGNC Symbol;Acc:HGNC:20407]
58. SERAC1 ENSGALG00000013732 24 0.949 - - 0.949 - - - - - - - serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]
59. B4GALNT3 ENSGALG00000012988 12 0.944 - - 0.944 - - - - - - - beta-1,4-N-acetyl-galactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:24137]
60. TRPM1 ENSGALG00000003849 5 0.944 - - 0.944 - - - - - - - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
61. ENSGALG00000001323 ENSGALG00000001323 3 0.944 - - 0.944 - - - - - - -
62. SLC35A3 12 0.944 - - 0.944 - - - - - - - solute carrier family 35 member A3, transcript variant X7
63. TNPO1 ENSGALG00000015014 57 0.94 - - 0.940 - - - - - - - transportin 1 [Source:HGNC Symbol;Acc:HGNC:6401]
64. SNX18 ENSGALG00000014914 7 0.937 - - 0.937 - - - - - - - sorting nexin 18 [Source:HGNC Symbol;Acc:HGNC:19245]
65. GCM2 ENSGALG00000012768 6 0.932 - - 0.932 - - - - - - - glial cells missing homolog 2 [Source:NCBI gene;Acc:428478]
66. DCUN1D3 ENSGALG00000002267 6 0.916 - - 0.916 - - - - - - - defective in cullin neddylation 1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28734]
67. DOCK5 ENSGALG00000000311 51 0.914 - - 0.914 - - - - - - - dedicator of cytokinesis 5, transcript variant X2
68. PLXNB1 23 0.908 - - 0.908 - - - - - - - plexin B1, transcript variant X2
69. TGM4 ENSGALG00000033171 19 0.906 - - 0.906 - - - - - - - transglutaminase 4 [Source:NCBI gene;Acc:420706]
70. UPF3A ENSGALG00000016815 48 0.906 - - 0.906 - - - - - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20332]
71. MCT2L ENSGALG00000007596 127 0.904 - - 0.904 - - - - - - - monocarboxylate transporter 2-like, transcript variant X5
72. DLST ENSGALG00000010286 19 0.903 - - 0.903 - - - - - - - dihydrolipoamide S-succinyltransferase [Source:NCBI gene;Acc:423357]
73. ENSGALG00000021517 ENSGALG00000021517 7 0.901 - - - - - 0.901 - - - -
74. CAPN3 ENSGALG00000009050 3 0.901 - - - - - 0.901 - - - - calpain 3 [Source:NCBI gene;Acc:423233]
75. SMC1B ENSGALG00000014228 19 0.901 - - - - - 0.901 - - - - structural maintenance of chromosomes 1B [Source:HGNC Symbol;Acc:HGNC:11112]
76. TOR3A ENSGALG00000004216 1 0.901 - - - - - 0.901 - - - - torsin family 3 member A [Source:HGNC Symbol;Acc:HGNC:11997]
77. CRYAA ENSGALG00000016199 12 0.901 - - - - - 0.901 - - - - crystallin alpha A [Source:NCBI gene;Acc:418546]
78. ENSGALG00000011449 ENSGALG00000011449 2 0.901 - - - - - 0.901 - - - -
79. EGF ENSGALG00000012155 8 0.901 - - - - - 0.901 - - - - epidermal growth factor [Source:NCBI gene;Acc:408035]
80. LIPML4 ENSGALG00000006302 2 0.901 - - - - - 0.901 - - - - lipase member M-like 4
81. ADAMTS15 ENSGALG00000001407 11 0.901 - - - - - 0.901 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 15 [Source:HGNC Symbol;Acc:HGNC:16305]
82. TMEM63B ENSGALG00000010282 7 0.9 - - 0.900 - - - - - - - transmembrane protein 63B [Source:HGNC Symbol;Acc:HGNC:17735]
83. PPHLN1 ENSGALG00000009547 30 0.898 - - 0.898 - - - - - - - periphilin 1 [Source:NCBI gene;Acc:417792]
84. FEM1B ENSGALG00000028906 4 0.898 - - 0.898 - - - - - - - fem-1 homolog B [Source:NCBI gene;Acc:415559]
85. PBEF1 PBEF1 25 0.895 - - - - - 0.895 - - - -
86. HOXB1 ENSGALG00000013454 9 0.89 - - 0.890 - - - - - - - homeobox B1 [Source:NCBI gene;Acc:395900]
87. CCDC125 ENSGALG00000015572 51 0.89 - - - - - 0.890 - - - - coiled-coil domain containing 125 [Source:HGNC Symbol;Acc:HGNC:28924]
88. MMP23B ENSGALG00000001392 53 0.888 - - 0.888 - - - - - - - matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]
89. EXOC6 ENSGALG00000006763 119 0.887 - - 0.887 - - - - - - - exocyst complex component 6 [Source:NCBI gene;Acc:423807]
90. SLC5A11 ENSGALG00000005933 28 0.883 - - 0.883 - - - - - - - solute carrier family 5 member 11 [Source:HGNC Symbol;Acc:HGNC:23091]
91. TLR15 ENSGALG00000008166 29 0.882 - - - - - 0.882 - - - - Gallus gallus toll-like receptor 15 (TLR15), mRNA. [Source:RefSeq mRNA;Acc:NM_001037835]
92. KCNS3 ENSGALG00000016470 4 0.882 - - - - - 0.882 - - - - potassium voltage-gated channel modifier subfamily S member 3 [Source:HGNC Symbol;Acc:HGNC:6302]
93. SLC12A8 ENSGALG00000012045 39 0.88 - - - - - 0.880 - - - - solute carrier family 12 member 8 [Source:HGNC Symbol;Acc:HGNC:15595]
94. BAP1 ENSGALG00000004366 12 0.88 - - 0.880 - - - - - - - BRCA1 associated protein 1 [Source:NCBI gene;Acc:415944]
95. ENC1 ENSGALG00000014930 10 0.879 - - 0.879 - - - - - - - ectodermal-neural cortex 1 [Source:HGNC Symbol;Acc:HGNC:3345]
96. ADAM17 ENSGALG00000016427 49 0.878 - - 0.878 - - - - - - - ADAM metallopeptidase domain 17 [Source:NCBI gene;Acc:421931]
97. ZMAT1 ZMAT1 12 0.876 - - 0.876 - - - - - - -
98. SLC22A18 ENSGALG00000006454 24 0.875 - - - - - 0.875 - - - - solute carrier family 22 member 18 [Source:HGNC Symbol;Acc:HGNC:10964]
99. ENSGALG00000027164 ENSGALG00000027164 8 0.874 - - - - - 0.874 - - - -
100. ATRN ENSGALG00000016034 16 0.874 - - - - - 0.874 - - - - attractin [Source:HGNC Symbol;Acc:HGNC:885]

There are 155 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA