Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for HOXA9

Gene Name Gene ID Reads Annotation
HOXA9 ENSGALG00000028983 9298 homeobox A9 [Source:NCBI gene;Acc:396096]











Genes with expression patterns similar to HOXA9

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HOXA9 ENSGALG00000028983 9298 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homeobox A9 [Source:NCBI gene;Acc:396096]
2. CSTF2 ENSGALG00000006760 8820 2.224 - - - - - - 0.710 0.715 - 0.799 cleavage stimulation factor subunit 2 [Source:NCBI gene;Acc:422258]
3. UBE3C ENSGALG00000006461 57 1.782 - - 0.914 - - - - - - 0.868 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
4. C3ORF64 C3ORF64 49 1.739 - - 0.914 - 0.825 - - - - -
5. ENTHD2 684 1.715 - - - - 0.845 - - - - 0.870 ENTH domain containing 2, transcript variant X1
6. TRMT44 ENSGALG00000015594 1490 1.686 - - 0.843 - - - - - - 0.843 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
7. COL12A1 ENSGALG00000015908 1300 1.615 - - 0.734 - - - - - - 0.881 collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
8. DTX2 ENSGALG00000001905 1475 1.614 - - 0.743 - - - - - - 0.871 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
9. MRPL15 ENSGALG00000041086 16820 1.599 - - - - - - 0.790 - - 0.809 mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
10. INTS12 ENSGALG00000010575 2976 1.577 - - - - - - 0.781 - - 0.796 integrator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:25067]
11. METTL23 ENSGALG00000001790 7906 1.568 - - - - - - 0.753 0.815 - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
12. FBXL17 ENSGALG00000000276 2443 1.568 - - - - - - 0.766 - - 0.802 F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
13. USP14 ENSGALG00000014920 18778 1.56 - - - - - - - 0.736 - 0.824 ubiquitin specific peptidase 14 [Source:HGNC Symbol;Acc:HGNC:12612]
14. IP6K2 ENSGALG00000005701 12539 1.56 - - - - - - 0.807 - - 0.753 inositol hexakisphosphate kinase 2 [Source:NCBI gene;Acc:416010]
15. NLRP1L ENSGALG00000023546 3195 1.557 - - - - - - 0.707 - - 0.850 NLR family, pyrin domain containing 1-like, transcript variant X8
16. KLHDC4 ENSGALG00000037315 9828 1.552 - - - - - - 0.746 0.806 - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
17. UBE2V1 ENSGALG00000008015 17947 1.541 - - - - - - 0.794 0.747 - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
18. SUDS3 ENSGALG00000007393 8322 1.541 - - - - - - 0.783 - - 0.758 SDS3 homolog, SIN3A corepressor complex component [Source:NCBI gene;Acc:427713]
19. RAB24 ENSGALG00000002984 6264 1.531 - - 0.793 - - - 0.738 - - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
20. MED17 ENSGALG00000017218 5821 1.527 - - - - - - 0.719 - - 0.808 mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
21. LRP11 ENSGALG00000019987 3341 1.524 - - 0.705 - - - - - - 0.819 LDL receptor related protein 11 [Source:HGNC Symbol;Acc:HGNC:16936]
22. BIRC6 ENSGALG00000010541 7999 1.517 - - - - - - 0.743 0.774 - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
23. SIRT6 ENSGALG00000001245 3716 1.51 - - - - - - 0.757 - - 0.753 sirtuin 6 [Source:NCBI gene;Acc:428332]
24. MLST8 ENSGALG00000005878 8116 1.505 - - - - - - 0.706 - - 0.799 MTOR associated protein, LST8 homolog [Source:HGNC Symbol;Acc:HGNC:24825]
25. ZC3H13 ENSGALG00000016984 21043 1.504 - - - - - - 0.796 0.708 - - zinc finger CCCH-type containing 13 [Source:HGNC Symbol;Acc:HGNC:20368]
26. EHD3 ENSGALG00000009086 14407 1.499 - - - - - - 0.736 - - 0.763 EH domain containing 3 [Source:NCBI gene;Acc:421306]
27. EIF2S1 ENSGALG00000009565 63906 1.495 - 0.746 - - - - 0.749 - - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
28. PLRG1 ENSGALG00000009257 8613 1.49 - - - - - - 0.704 0.786 - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
29. SCCPDH ENSGALG00000010641 8624 1.477 - - - - - - 0.728 0.749 - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
30. SOS1 ENSGALG00000039450 3941 1.468 - - - - - - 0.727 - - 0.741 SOS Ras/Rac guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:11187]
31. CXXC5 ENSGALG00000000884 16351 1.463 - - - - - - 0.719 0.744 - - CXXC finger protein 5 [Source:HGNC Symbol;Acc:HGNC:26943]
32. TET1 ENSGALG00000031604 13002 1.463 - - - - - - 0.702 - - 0.761 tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
33. RBM48 ENSGALG00000009467 1096 1.461 - - - - - - 0.722 - - 0.739 RNA binding motif protein 48 [Source:NCBI gene;Acc:420555]
34. MOSPD2 ENSGALG00000016568 1765 1.456 - - 0.704 - - - 0.752 - - - motile sperm domain containing 2 [Source:NCBI gene;Acc:418627]
35. GABARAPL2 ENSGALG00000003208 9195 1.45 - - - - - - 0.739 - - 0.711 GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
36. TOR1AIP1 ENSGALG00000029238 5843 1.447 - - - - - - 0.721 - - 0.726 torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
37. DM5L ENSGALG00000003022 1 1 - - - 1.000 - - - - - - dimethylaniline monooxygenase [N-oxide-forming] 5-like
38. ENSGALG00000010883 ENSGALG00000010883 10 1 - - - 1.000 - - - - - -
39. MILR1 ENSGALG00000046212 7 1 - - - - 1.000 - - - - - mast cell immunoglobulin-like receptor 1, transcript variant X3
40. ENSGALG00000026580 ENSGALG00000026580 4 1 - - - 1.000 - - - - - -
41. C1orf228 3 1 - - - 1.000 - - - - - - chromosome 1 open reading frame 228, transcript variant X5
42. ENSGALG00000025865 ENSGALG00000025865 1 1 - - - 1.000 - - - - - -
43. VLDL VLDL 13 1 - - - - 1.000 - - - - -
44. DISP2 ENSGALG00000031266 5 1 - - - 1.000 - - - - - - dispatched RND transporter family member 2 [Source:HGNC Symbol;Acc:HGNC:19712]
45. gga-mir-10b ENSGALG00000018331 147 1 - - - 1.000 - - - - - - gga-mir-10b [Source:miRBase;Acc:MI0001216]
46. TECPR1 ENSGALG00000003507 20 1 - - - - 1.000 - - - - - tectonin beta-propeller repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:22214]
47. KCNU1 ENSGALG00000045668 2 1 - - - 1.000 - - - - - - potassium calcium-activated channel subfamily U member 1 [Source:HGNC Symbol;Acc:HGNC:18867]
48. SNX21 ENSGALG00000006836 5 1 - - - - 1.000 - - - - - sorting nexin family member 21 [Source:HGNC Symbol;Acc:HGNC:16154]
49. SIX4 ENSGALG00000017389 10 1 - - - - 1.000 - - - - - SIX homeobox 4 [Source:HGNC Symbol;Acc:HGNC:10890]
50. ENSGALG00000007498 ENSGALG00000007498 2 1 - - - 1.000 - - - - - -
51. TAB3 ENSGALG00000016284 40 1 - - - - 1.000 - - - - - TGF-beta activated kinase 1 (MAP3K7) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30681]
52. C2orf50 ENSGALG00000046449 17 1 - - - - 1.000 - - - - - chromosome 2 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26324]
53. SLC22A7 ENSGALG00000001661 9 1 - - - - 1.000 - - - - - solute carrier family 22 member 7 [Source:NCBI gene;Acc:416712]
54. snosnR60 snosnR60 3 1 - - - 1.000 - - - - - -
55. RC3H2 ENSGALG00000001253 18 1 - - - - 1.000 - - - - - ring finger and CCCH-type domains 2 [Source:HGNC Symbol;Acc:HGNC:21461]
56. TMEM132D ENSGALG00000002671 12 1 - - - - 1.000 - - - - - transmembrane protein 132D, transcript variant X6
57. MYLK3 ENSGALG00000004334 13 1 - - - - 1.000 - - - - - myosin light chain kinase 3 [Source:HGNC Symbol;Acc:HGNC:29826]
58. DCDC2B ENSGALG00000046649 3 1 - - - 1.000 - - - - - - doublecortin domain containing 2B [Source:HGNC Symbol;Acc:HGNC:32576]
59. IKBIP ENSGALG00000026284 31 0.997 - - 0.997 - - - - - - - IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
60. SPTSSBL ENSGALG00000026131 70 0.995 - - 0.995 - - - - - - - serine palmitoyltransferase small subunit B-like, transcript variant X6
61. ANKRD42 8 0.995 - - 0.995 - - - - - - - ankyrin repeat domain 42
62. LHX6 ENSGALG00000001347 7 0.995 - - 0.995 - - - - - - - LIM homeobox 6 [Source:HGNC Symbol;Acc:HGNC:21735]
63. ENSGALG00000000407 ENSGALG00000000407 32 0.994 - - 0.994 - - - - - - -
64. YDJC ENSGALG00000029198 14 0.994 - - 0.994 - - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:HGNC Symbol;Acc:HGNC:27158]
65. PLAG1 ENSGALG00000015407 17 0.993 - - 0.993 - - - - - - - PLAG1 zinc finger [Source:NCBI gene;Acc:429484]
66. ENSGALG00000026975 ENSGALG00000026975 8 0.992 - - 0.992 - - - - - - -
67. LRRC56 ENSGALG00000041955 16 0.992 - - 0.992 - - - - - - - leucine rich repeat containing 56 [Source:HGNC Symbol;Acc:HGNC:25430]
68. PSMD4 ENSGALG00000028505 16 0.991 - - 0.991 - - - - - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
69. ENSGALG00000022155 ENSGALG00000022155 80 0.991 - - - - 0.991 - - - - -
70. ENSGALG00000013318 ENSGALG00000013318 8 0.986 - - - - 0.986 - - - - -
71. DNAH7 ENSGALG00000007841 32 0.986 - - 0.986 - - - - - - - dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
72. TAPBPL ENSGALG00000014428 39 0.985 - - - - 0.985 - - - - - TAP binding protein like [Source:NCBI gene;Acc:426340]
73. SATB2 ENSGALG00000008135 347 0.985 - - 0.985 - - - - - - - SATB homeobox 2 [Source:NCBI gene;Acc:424063]
74. TMEM230 ENSGALG00000036876 55 0.983 - - 0.983 - - - - - - - transmembrane protein 230 [Source:NCBI gene;Acc:419518]
75. ENSGALG00000029120 ENSGALG00000029120 73 0.979 - - 0.979 - - - - - - -
76. K123 ENSGALG00000041978 16 0.977 - - - - 0.977 - - - - - K123 protein [Source:NCBI gene;Acc:395873]
77. MMP9 ENSGALG00000006992 78 0.971 - - 0.971 - - - - - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
78. FNDC7 ENSGALG00000001983 24 0.971 - - 0.971 - - - - - - - fibronectin type III domain containing 7 [Source:HGNC Symbol;Acc:HGNC:26668]
79. ENSGALG00000022901 ENSGALG00000022901 19 0.97 - - - 0.970 - - - - - -
80. TFRC 31 0.968 - - - 0.968 - - - - - - transferrin receptor, transcript variant X1
81. ENSGALG00000021882 ENSGALG00000021882 63 0.965 - - 0.965 - - - - - - -
82. ENSGALG00000006278 ENSGALG00000006278 202 0.964 - - 0.964 - - - - - - -
83. PRKCZ ENSGALG00000001270 12 0.962 - - 0.962 - - - - - - - protein kinase C zeta [Source:HGNC Symbol;Acc:HGNC:9412]
84. MOG ENSGALG00000022875 9 0.961 - - - 0.961 - - - - - - myelin oligodendrocyte glycoprotein, transcript variant X50
85. ST3GAL5 ENSGALG00000033260 19 0.961 - - - - 0.961 - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:NCBI gene;Acc:407775]
86. TSPAN18 ENSGALG00000036901 14 0.958 - - 0.958 - - - - - - - tetraspanin 18 [Source:NCBI gene;Acc:395586]
87. CYP3A4 ENSGALG00000004436 75 0.957 - - 0.957 - - - - - - - Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
88. TMEM156 ENSGALG00000024490 9 0.956 - - - - 0.956 - - - - - transmembrane protein 156, transcript variant X5
89. SLCO4C1 ENSGALG00000026768 30 0.954 - - 0.954 - - - - - - - solute carrier organic anion transporter family member 4C1, transcript variant X4
90. ENSGALG00000028328 ENSGALG00000028328 23 0.953 - - - - 0.953 - - - - -
91. XYLT1 ENSGALG00000006757 169 0.952 - - 0.952 - - - - - - - xylosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15516]
92. SAMSN1 ENSGALG00000040926 88 0.952 - - 0.952 - - - - - - - SAM domain, SH3 domain and nuclear localization signals 1 [Source:NCBI gene;Acc:418470]
93. ZBTB21 ENSGALG00000016147 13 0.952 - - 0.952 - - - - - - - zinc finger and BTB domain containing 21 [Source:HGNC Symbol;Acc:HGNC:13083]
94. B3GNTL1 ENSGALG00000001433 22 0.951 - - 0.951 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
95. HECW1 ENSGALG00000037193 24 0.95 - - - - 0.950 - - - - - HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:22195]
96. ENSGALG00000000346 ENSGALG00000000346 130 0.947 - - - - 0.947 - - - - -
97. SUSD4 ENSGALG00000009388 48 0.942 - - 0.942 - - - - - - - sushi domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25470]
98. DSG2 ENSGALG00000015142 67 0.942 - - 0.942 - - - - - - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
99. TMEM52B ENSGALG00000034698 169 0.942 - - - - 0.942 - - - - - transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
100. REEP2 ENSGALG00000017365 338 0.941 - - 0.941 - - - - - - - receptor accessory protein 2 [Source:HGNC Symbol;Acc:HGNC:17975]

There are 925 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA