Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HOXA7

Gene Name Gene ID Reads Annotation
HOXA7 ENSGALG00000026989 6746 homeobox A7 [Source:NCBI gene;Acc:395290]











Genes with expression patterns similar to HOXA7

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HOXA7 ENSGALG00000026989 6746 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homeobox A7 [Source:NCBI gene;Acc:395290]
2. CHGA ENSGALG00000010820 1028 1.747 - - 0.960 - - - - 0.787 - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
3. SZT2 ENSGALG00000028561 255 1.746 - - 0.961 - - - - 0.785 - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
4. LRRC42 ENSGALG00000010743 384 1.745 - - 0.955 - - - - 0.790 - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
5. HNRNPLL ENSGALG00000008504 14719 1.713 - - 0.918 - - - 0.795 - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
6. ELOVL5 ENSGALG00000016314 18163 1.695 - - 0.872 - - - 0.823 - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
7. ZC3H11A ENSGALG00000000541 2712 1.689 - - 0.894 - - - - 0.795 - - zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
8. ST14 ENSGALG00000001331 1655 1.676 - - 0.853 - - - - 0.823 - - suppression of tumorigenicity 14 [Source:HGNC Symbol;Acc:HGNC:11344]
9. REXO2 ENSGALG00000035980 16319 1.667 - - 0.925 - - - 0.742 - - - RNA exonuclease 2 [Source:NCBI gene;Acc:419761]
10. BRF1 ENSGALG00000011705 3406 1.658 - - 0.806 - - - - 0.852 - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
11. ATP6V1E1 ENSGALG00000013036 13497 1.656 - - 0.862 - - - - 0.794 - - ATPase H+ transporting V1 subunit E1 [Source:NCBI gene;Acc:418162]
12. WBP4 ENSGALG00000016949 5858 1.653 - - 0.828 - - - - 0.825 - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
13. BRE 10440 1.651 - - 0.854 - - - 0.797 - - - brain and reproductive organ-expressed (TNFRSF1A modulator), transcript variant X2
14. GDI2 ENSGALG00000008169 67151 1.627 - - 0.814 - - - - - 0.813 - GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
15. SMC4 ENSGALG00000009553 15715 1.62 - - 0.891 - - - 0.729 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
16. UBE2E3 ENSGALG00000020793 9517 1.618 - - 0.913 - - - 0.705 - - - ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
17. CCNI ENSGALG00000011457 3203 1.617 - - 0.777 - - - - 0.840 - - cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
18. WTAP ENSGALG00000011660 10811 1.611 - - 0.847 - - - 0.764 - - - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
19. PDPK1 ENSGALG00000006418 13412 1.602 - - 0.841 - - - 0.761 - - - 3-phosphoinositide dependent protein kinase 1 [Source:NCBI gene;Acc:416588]
20. TIAR TIAR 2471 1.601 - - 0.864 - - - - - - 0.737
21. PAXBP1 ENSGALG00000036833 5573 1.594 - - 0.735 - - - - 0.859 - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
22. SPCS3 ENSGALG00000010839 19106 1.591 - - 0.824 - - - 0.767 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
23. LOC776067 ENSGALG00000016808 9164 1.566 - - - - - - 0.736 0.830 - - E3 SUMO-protein ligase RanBP2-like, transcript variant X50
24. GTF2H5 ENSGALG00000013733 12293 1.554 - - 0.791 - - - 0.763 - - - general transcription factor IIH subunit 5 [Source:NCBI gene;Acc:769754]
25. CNOT2 ENSGALG00000010042 7612 1.553 - - - - - - 0.707 0.846 - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
26. TSPAN6 ENSGALG00000006808 20063 1.55 - - 0.748 - - - 0.802 - - - tetraspanin 6 [Source:NCBI gene;Acc:422262]
27. GSPT1 15580 1.54 - - 0.775 - - - 0.765 - - - G1 to S phase transition 1, transcript variant X1
28. CAMK2G ENSGALG00000005088 5037 1.538 - - - - - - 0.718 0.820 - - calcium/calmodulin dependent protein kinase II gamma [Source:HGNC Symbol;Acc:HGNC:1463]
29. ELAVL4 ENSGALG00000010533 4978 1.525 - - 0.742 - - - - - 0.783 - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
30. IGF2BP3 ENSGALG00000010961 81524 1.522 - - 0.773 - - - 0.749 - - - insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
31. RANGAP1 ENSGALG00000011966 20170 1.511 - - - - - - 0.747 0.764 - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
32. COMMD1 ENSGALG00000008931 12202 1.51 - - - - - - 0.708 0.802 - - copper metabolism domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23024]
33. STX16 ENSGALG00000007541 6458 1.49 - - 0.786 - - - 0.704 - - - syntaxin 16 [Source:NCBI gene;Acc:419315]
34. SBNO1 ENSGALG00000003392 6731 1.483 - - 0.751 - - - 0.732 - - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
35. PDHA1 ENSGALG00000016430 7070 1.478 - - 0.734 - - - 0.744 - - - pyruvate dehydrogenase E1 alpha 1 subunit [Source:NCBI gene;Acc:418610]
36. HCCS ENSGALG00000005571 4939 1.478 - - 0.763 - - - 0.715 - - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
37. CXXC5 ENSGALG00000000884 16351 1.475 - - 0.707 - - - 0.768 - - - CXXC finger protein 5 [Source:HGNC Symbol;Acc:HGNC:26943]
38. TUBB2C TUBB2C 44249 1.462 - - - - - - 0.736 - 0.726 -
39. CDC45 ENSGALG00000001616 8432 1.459 - - 0.754 - - - 0.705 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
40. CENPH ENSGALG00000014788 10601 1.454 - - 0.748 - - - 0.706 - - - centromere protein H [Source:NCBI gene;Acc:395316]
41. ARFIP1 ENSGALG00000041361 7351 1.446 - - 0.719 - - - 0.727 - - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
42. XPO1 ENSGALG00000029476 9526 1.437 - - - - - - 0.709 0.728 - - exportin 1 [Source:NCBI gene;Acc:421192]
43. FARP1 ENSGALG00000016886 13132 1.434 - - 0.713 - - - 0.721 - - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
44. PRUNE PRUNE 452 0.964 - - 0.964 - - - - - - -
45. UEVLD ENSGALG00000006342 164 0.963 - - 0.963 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
46. CENPO ENSGALG00000016609 1699 0.963 - - 0.963 - - - - - - - centromere protein O [Source:NCBI gene;Acc:422014]
47. SMARCAD1 ENSGALG00000037339 149 0.962 - - 0.962 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
48. MRC2 ENSGALG00000000461 48 0.961 - - 0.961 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
49. LRRC71 ENSGALG00000027351 695 0.961 - - 0.961 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
50. ENSGALG00000028964 ENSGALG00000028964 46 0.961 - - 0.961 - - - - - - -
51. TDRD6 48 0.961 - - 0.961 - - - - - - - tudor domain containing 6
52. ITGB4 ENSGALG00000002389 44 0.961 - - 0.961 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
53. RPS6KB1 ENSGALG00000005198 169 0.96 - - 0.960 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
54. FBXL5 ENSGALG00000014510 245 0.96 - - 0.960 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
55. CDC14B ENSGALG00000012627 110 0.96 - - 0.960 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
56. TCTN2 ENSGALG00000023683 3596 0.96 - - 0.960 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
57. GTF2H2 ENSGALG00000002399 2361 0.96 - - 0.960 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
58. NGF ENSGALG00000002556 122 0.959 - - 0.959 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
59. GDPD4 ENSGALG00000000690 824 0.959 - - 0.959 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
60. ENSGALG00000020103 ENSGALG00000020103 64 0.959 - - 0.959 - - - - - - -
61. RQCD1 RQCD1 110 0.959 - - 0.959 - - - - - - -
62. DBN1 ENSGALG00000033405 216 0.958 - - 0.958 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
63. NACAD 679 0.958 - - 0.958 - - - - - - - NAC alpha domain containing, transcript variant X1
64. TTPAL ENSGALG00000004244 2734 0.958 - - 0.958 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
65. F2R ENSGALG00000014983 106 0.958 - - 0.958 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
66. MED12 ENSGALG00000036322 814 0.958 - - 0.958 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
67. ITM2B ENSGALG00000016996 1112 0.958 - - 0.958 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
68. CLEC16A ENSGALG00000007167 66 0.957 - - 0.957 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
69. AKAP10 ENSGALG00000004679 103 0.957 - - 0.957 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
70. CA9 ENSGALG00000021340 1431 0.957 - - 0.957 - - - - - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
71. PTDSS2 ENSGALG00000004300 682 0.957 - - 0.957 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
72. OSGIN2 ENSGALG00000042840 83 0.957 - - 0.957 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
73. NXPE3 ENSGALG00000015344 111 0.957 - - 0.957 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
74. TRIM13 ENSGALG00000017011 92 0.957 - - 0.957 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
75. ENSGALG00000002020 ENSGALG00000002020 183 0.957 - - 0.957 - - - - - - -
76. SLC3A1 ENSGALG00000009973 608 0.957 - - 0.957 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
77. ENSGALG00000004703 ENSGALG00000004703 112 0.957 - - 0.957 - - - - - - -
78. U4 U4 69 0.956 - - 0.956 - - - - - - -
79. L3MBTL3 ENSGALG00000034030 113 0.956 - - 0.956 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
80. TUBGCP3 ENSGALG00000016836 332 0.955 - - 0.955 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
81. CAMSAP1 ENSGALG00000001692 2617 0.955 - - 0.955 - - - - - - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
82. CHAMP1 ENSGALG00000016813 508 0.954 - - 0.954 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
83. ADK ENSGALG00000005057 199 0.954 - - 0.954 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
84. FAM134C 860 0.954 - - 0.954 - - - - - - - family with sequence similarity 134 member C
85. ABCC3 ENSGALG00000007522 340 0.954 - - 0.954 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
86. BBS5 ENSGALG00000009846 344 0.953 - - 0.953 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
87. RAD54L2 ENSGALG00000003243 187 0.953 - - 0.953 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
88. SNX14 ENSGALG00000015831 2554 0.952 - - 0.952 - - - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
89. RFK ENSGALG00000033558 1364 0.951 - - 0.951 - - - - - - - riboflavin kinase, transcript variant X3
90. KCTD3 ENSGALG00000009678 335 0.951 - - 0.951 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
91. IFT81 ENSGALG00000003854 2534 0.95 - - 0.950 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
92. BBX ENSGALG00000015353 1281 0.948 - - 0.948 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
93. ATP10D ENSGALG00000014192 94 0.947 - - 0.947 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
94. APTX ENSGALG00000001954 692 0.947 - - 0.947 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
95. MLLT3 ENSGALG00000015078 502 0.946 - - 0.946 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
96. SLC37A3 ENSGALG00000012849 836 0.946 - - 0.946 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
97. PCYT1B 190 0.945 - - 0.945 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
98. CEP104 ENSGALG00000000978 1130 0.945 - - 0.945 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
99. C18orf8 C18orf8 1512 0.945 - - 0.945 - - - - - - -
100. RRN3 ENSGALG00000041989 3934 0.945 - - 0.945 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]

There are 853 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA