Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for HOXA2

Gene Name Gene ID Reads Annotation
HOXA2 ENSGALG00000040521 1054 homeobox A2 [Source:NCBI gene;Acc:396055]











Genes with expression patterns similar to HOXA2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HOXA2 ENSGALG00000040521 1054 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homeobox A2 [Source:NCBI gene;Acc:396055]
2. MLH1 ENSGALG00000039169 19 1.54 - - - - - 0.783 - - - 0.757 mutL homolog 1 [Source:HGNC Symbol;Acc:HGNC:7127]
3. TRPC1 ENSGALG00000002639 296 0.891 - - - - - 0.891 - - - - transient receptor potential cation channel subfamily C member 1 [Source:NCBI gene;Acc:424776]
4. MLXIP ENSGALG00000004397 125 0.849 - - - - - 0.849 - - - - MLX interacting protein [Source:HGNC Symbol;Acc:HGNC:17055]
5. SPATA6 ENSGALG00000010502 16 0.824 - - - - - 0.824 - - - - spermatogenesis associated 6 [Source:HGNC Symbol;Acc:HGNC:18309]
6. SASH1 ENSGALG00000012342 28 0.807 - - - - - - - - - 0.807 SAM and SH3 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19182]
7. DOK6 ENSGALG00000013753 2 0.802 - - - - - 0.802 - - - - docking protein 6 [Source:HGNC Symbol;Acc:HGNC:28301]
8. MAGI2 1111 0.8 - - - - - 0.800 - - - - membrane associated guanylate kinase, WW and PDZ domain containing 2, transcript variant X12
9. ST3GAL4 ENSGALG00000029747 184 0.788 - - - - - 0.788 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:10864]
10. CARD8 ENSGALG00000007698 45 0.787 - - - - - 0.787 - - - - caspase recruitment domain family, member 8
11. PARD6A ENSGALG00000001214 9 0.786 - - - - - 0.786 - - - - par-6 family cell polarity regulator alpha [Source:HGNC Symbol;Acc:HGNC:15943]
12. GZF1_1 ENSGALG00000008350 92 0.784 - - - - - 0.784 - - - - GDNF inducible zinc finger protein 1 [Source:HGNC Symbol;Acc:HGNC:15808]
13. SPOCK2 9 0.784 - - - - - 0.784 - - - - SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2, transcript variant X2
14. TMEM52B ENSGALG00000034698 169 0.784 - - - - - 0.784 - - - - transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
15. CDH20 ENSGALG00000012906 2 0.783 - - - - - 0.783 - - - - cadherin 20, type 2 [Source:NCBI gene;Acc:373927]
16. TPPP3 ENSGALG00000002103 1 0.783 - - - - - 0.783 - - - - tubulin polymerization promoting protein family member 3 [Source:HGNC Symbol;Acc:HGNC:24162]
17. ERN1 ENSGALG00000003476 4 0.783 - - - - - 0.783 - - - - endoplasmic reticulum to nucleus signaling 1 [Source:NCBI gene;Acc:417414]
18. ENSGALG00000028322 ENSGALG00000028322 19 0.783 - - - - - 0.783 - - - -
19. LRP3 ENSGALG00000004853 13 0.783 - - - - - 0.783 - - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
20. ENSGALG00000027815 ENSGALG00000027815 15 0.783 - - - - - 0.783 - - - -
21. CDXB CDXB 143 0.783 - - - - - 0.783 - - - -
22. LMO3 ENSGALG00000036358 1 0.783 - - - - - 0.783 - - - - LIM domain only 3 [Source:HGNC Symbol;Acc:HGNC:6643]
23. SLC6A11 ENSGALG00000004879 16 0.783 - - - - - 0.783 - - - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
24. RHPN1 ENSGALG00000034337 3 0.783 - - - - - 0.783 - - - - rhophilin Rho GTPase binding protein 1 [Source:HGNC Symbol;Acc:HGNC:19973]
25. MYNN ENSGALG00000009409 11 0.783 - - - - - 0.783 - - - - myoneurin [Source:HGNC Symbol;Acc:HGNC:14955]
26. IPP ENSGALG00000010287 2 0.783 - - - - - 0.783 - - - - intracisternal A particle-promoted polypeptide [Source:HGNC Symbol;Acc:HGNC:6108]
27. GIF ENSGALG00000031546 2 0.783 - - - - - 0.783 - - - - gastric intrinsic factor [Source:HGNC Symbol;Acc:HGNC:4268]
28. MYO18B ENSGALG00000045218 7 0.783 - - - - - 0.783 - - - - myosin XVIIIB [Source:HGNC Symbol;Acc:HGNC:18150]
29. C9orf171 C9orf171 35 0.783 - - - - - 0.783 - - - -
30. ENSGALG00000025714 ENSGALG00000025714 6 0.783 - - - - - 0.783 - - - -
31. BPIFC BPIFC 1 0.783 - - - - - 0.783 - - - -
32. ENSGALG00000028571 ENSGALG00000028571 1 0.783 - - - - - 0.783 - - - -
33. ENSGALG00000019221 ENSGALG00000019221 9 0.783 - - - - - 0.783 - - - -
34. PSCA ENSGALG00000045875 5 0.783 - - - - - 0.783 - - - - prostate stem cell antigen [Source:HGNC Symbol;Acc:HGNC:9500]
35. GPR139 ENSGALG00000027146 39 0.783 - - - - - - - - - 0.783 Gallus gallus G protein-coupled receptor 139 (GPR139), mRNA. [Source:RefSeq mRNA;Acc:NM_001321735]
36. SV2C ENSGALG00000014967 7 0.777 - - - - - 0.777 - - - - synaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:HGNC:30670]
37. ENSGALG00000007420 ENSGALG00000007420 7 0.772 - - - - - 0.772 - - - -
38. FAR1 ENSGALG00000005353 12 0.771 - - - - - 0.771 - - - - fatty acyl-CoA reductase 1 [Source:NCBI gene;Acc:423028]
39. GABPB2 ENSGALG00000026734 7 0.759 - - - - - 0.759 - - - - GA binding protein transcription factor subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:28441]
40. SOX2 ENSGALG00000043460 6 0.759 - - - - - 0.759 - - - - SRY-box 2 [Source:NCBI gene;Acc:396105]
41. ASXL1 ENSGALG00000006612 273 0.754 - - - - - 0.754 - - - - ASXL transcriptional regulator 1 [Source:HGNC Symbol;Acc:HGNC:18318]
42. DARS2 ENSGALG00000023749 2386 0.754 - - - - - - 0.754 - - - aspartyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25538]
43. CBFA2T2 ENSGALG00000003096 61 0.75 - - - - - 0.750 - - - - CBFA2/RUNX1 translocation partner 2 [Source:NCBI gene;Acc:419155]
44. GAREML GAREML 8 0.749 - - - - - 0.749 - - - -
45. LOC769139 ENSGALG00000026754 753 0.749 - - - - - 0.749 - - - - feather keratin 1-like, transcript variant X2
46. GDPD1 ENSGALG00000005103 91 0.748 - - - - - 0.748 - - - - glycerophosphodiester phosphodiesterase domain containing 1 [Source:NCBI gene;Acc:417631]
47. UBXN6 ENSGALG00000001146 122 0.745 - - - - - 0.745 - - - - UBX domain protein 6 [Source:HGNC Symbol;Acc:HGNC:14928]
48. ENSGALG00000001346 ENSGALG00000001346 233 0.745 - - - - - 0.745 - - - -
49. ADAMTS2 ENSGALG00000032974 141 0.744 - - - - - 0.744 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
50. FBXO18 35 0.742 - - - - - 0.742 - - - - F-box protein, helicase, 18, transcript variant X4
51. RASL11A ENSGALG00000017099 379 0.741 - - - - - 0.741 - - - - RAS like family 11 member A [Source:HGNC Symbol;Acc:HGNC:23802]
52. FAM181B ENSGALG00000046082 298 0.741 - - - - - 0.741 - - - - family with sequence similarity 181 member B [Source:HGNC Symbol;Acc:HGNC:28512]
53. HTR2C ENSGALG00000005853 90 0.74 - - - - - 0.740 - - - - Gallus gallus 5-hydroxytryptamine receptor 2C (HTR2C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318421]
54. ECEL1 ENSGALG00000030420 670 0.74 - - - - - 0.740 - - - - endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]
55. TCAIM ENSGALG00000011498 30 0.736 - - - - - 0.736 - - - - T-cell activation inhibitor, mitochondrial [Source:NCBI gene;Acc:420670]
56. SLC29A1 ENSGALG00000010182 1522 0.734 - - - - - 0.734 - - - - solute carrier family 29 member 1 (Augustine blood group) [Source:HGNC Symbol;Acc:HGNC:11003]
57. IGSF9 ENSGALG00000031193 16 0.734 - - - - - - - - - 0.734 immunoglobulin superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:18132]
58. BRINP2 ENSGALG00000004448 26 0.734 - - - - - 0.734 - - - - BMP/retinoic acid inducible neural specific 2 [Source:HGNC Symbol;Acc:HGNC:13746]
59. ABR ENSGALG00000004364 2802 0.733 - - - - - - - 0.733 - - ABR, RhoGEF and GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:81]
60. FOXP4 ENSGALG00000033497 13 0.731 - - - - - - - - - 0.731 forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
61. MED13L ENSGALG00000008238 27 0.73 - - - - - 0.730 - - - - mediator complex subunit 13 like [Source:HGNC Symbol;Acc:HGNC:22962]
62. CNGA3 ENSGALG00000039826 3 0.729 - - - - - - - - - 0.729 cyclic nucleotide gated channel alpha 3 [Source:NCBI gene;Acc:396144]
63. CILP ENSGALG00000007358 20 0.729 - - - - - - - - - 0.729 cartilage intermediate layer protein [Source:HGNC Symbol;Acc:HGNC:1980]
64. gga-mir-196-1 ENSGALG00000018313 2 0.729 - - - - - - - - - 0.729 gga-mir-196-1 [Source:miRBase;Acc:MI0001268]
65. SLC30A2 ENSGALG00000010375 44 0.729 - - - - - - - - - 0.729 solute carrier family 30 member 2 [Source:HGNC Symbol;Acc:HGNC:11013]
66. PRIMA1 ENSGALG00000020392 13 0.729 - - - - - - - - - 0.729 proline rich membrane anchor 1 [Source:NCBI gene;Acc:772317]
67. EMID1 4 0.729 - - - - - - - - - 0.729 EMI domain containing 1, transcript variant X5
68. PELI2 ENSGALG00000012124 7 0.729 - - - - - - - - - 0.729 pellino E3 ubiquitin protein ligase family member 2 [Source:HGNC Symbol;Acc:HGNC:8828]
69. ENSGALG00000025761 ENSGALG00000025761 6 0.729 - - - - - - - - - 0.729
70. CDCP2 ENSGALG00000010752 4 0.729 - - - - - - - - - 0.729 CUB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:27297]
71. UROS ENSGALG00000013688 10 0.729 - - - - - - - - - 0.729 uroporphyrinogen III synthase [Source:HGNC Symbol;Acc:HGNC:12592]
72. KIAA1958 ENSGALG00000023083 1 0.729 - - - - - - - - - 0.729 KIAA1958 [Source:HGNC Symbol;Acc:HGNC:23427]
73. CABP7 ENSGALG00000040463 1 0.729 - - - - - - - - - 0.729 calcium binding protein 7 [Source:HGNC Symbol;Acc:HGNC:20834]
74. ENSGALG00000029114 ENSGALG00000029114 4 0.729 - - - - - - - - - 0.729
75. ENSGALG00000027018 ENSGALG00000027018 12 0.729 - - - - - - - - - 0.729
76. ENSGALG00000023704 ENSGALG00000023704 2 0.729 - - - - - - - - - 0.729
77. FRMD6 ENSGALG00000012374 1 0.729 - - - - - - - - - 0.729 FERM domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19839]
78. ENSGALG00000023526 ENSGALG00000023526 10 0.729 - - - - - - - - - 0.729
79. IL4I1 ENSGALG00000000081 1 0.729 - - - - - - - - - 0.729 interleukin 4 induced 1 [Source:NCBI gene;Acc:417039]
80. HINT2 ENSGALG00000027418 10 0.729 - - - - - - - - - 0.729 histidine triad nucleotide binding protein 2 [Source:HGNC Symbol;Acc:HGNC:18344]
81. MILR1 ENSGALG00000046212 7 0.729 - - - - - - - - - 0.729 mast cell immunoglobulin-like receptor 1, transcript variant X3
82. LRMP ENSGALG00000014011 2 0.729 - - - - - - - - - 0.729 lymphoid restricted membrane protein [Source:HGNC Symbol;Acc:HGNC:6690]
83. AMZ1 ENSGALG00000004358 2 0.729 - - - - - - - - - 0.729 archaelysin family metallopeptidase 1
84. ENSGALG00000028531 ENSGALG00000028531 2 0.729 - - - - - - - - - 0.729
85. TRPM1 ENSGALG00000003849 5 0.729 - - - - - - - - - 0.729 transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
86. SNORA50 SNORA50 9 0.729 - - - - - - - - - 0.729
87. H2B-V H2B-V 24 0.727 - - - - - 0.727 - - - -
88. CLN5 ENSGALG00000016917 386 0.724 - - - - - 0.724 - - - - CLN5, intracellular trafficking protein [Source:NCBI gene;Acc:101752092]
89. ALKBH5 ENSGALG00000043693 350 0.723 - - - - - 0.723 - - - - Gallus gallus alkB homolog 5, RNA demethylase (ALKBH5), mRNA. [Source:RefSeq mRNA;Acc:NM_001257201]
90. C6H10ORF46 C6H10ORF46 1107 0.723 - - - - - - - 0.723 - -
91. C19H17ORF85 C19H17ORF85 2538 0.722 - - - - - - - 0.722 - -
92. ABCB5 ENSGALG00000010901 60 0.722 - - - - - 0.722 - - - - ATP binding cassette subfamily B member 5, transcript variant X1
93. PRLL ENSGALG00000009603 30 0.722 - - - - - 0.722 - - - - prolactin-like protein [Source:NCBI gene;Acc:417800]
94. HOXD3 ENSGALG00000023420 2117 0.721 - - - - - 0.721 - - - - homeobox D3 [Source:HGNC Symbol;Acc:HGNC:5137]
95. KIF18A ENSGALG00000012160 2612 0.721 - - - - - - - 0.721 - - kinesin family member 18A [Source:NCBI gene;Acc:421607]
96. ENSGALG00000023852 ENSGALG00000023852 31 0.715 - - - - - 0.715 - - - -
97. FMNL2 ENSGALG00000012525 78 0.715 - - - - - 0.715 - - - - formin like 2 [Source:HGNC Symbol;Acc:HGNC:18267]
98. CRHR1 ENSGALG00000000371 94 0.715 - - - - - - - - - 0.715 corticotropin releasing hormone receptor 1 [Source:NCBI gene;Acc:374218]
99. SLC35F4 ENSGALG00000012094 30 0.714 - - - - - - - - - 0.714 solute carrier family 35 member F4 [Source:HGNC Symbol;Acc:HGNC:19845]
100. HMGCS1 ENSGALG00000014862 2846 0.714 - - - - - - - 0.714 - - 3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:NCBI gene;Acc:396379]

There are 14 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA