Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for HOXA1

Gene Name Gene ID Reads Annotation
HOXA1 ENSGALG00000028095 137 homeobox A1 [Source:HGNC Symbol;Acc:HGNC:5099]











Genes with expression patterns similar to HOXA1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HOXA1 ENSGALG00000028095 137 6 - 1.000 1.000 - 1.000 - 1.000 1.000 - 1.000 homeobox A1 [Source:HGNC Symbol;Acc:HGNC:5099]
2. RAP2A ENSGALG00000016889 26 1.808 - - 0.808 - - - - - - 1.000 RAP2A, member of RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9861]
3. SLC38A7 ENSGALG00000002313 25 1.68 - - 0.774 - - - - 0.906 - - solute carrier family 38 member 7, transcript variant X5
4. GNPTG ENSGALG00000006441 50 1.479 - - 0.701 - - - - 0.778 - - N-acetylglucosamine-1-phosphate transferase gamma subunit [Source:NCBI gene;Acc:416591]
5. GDA ENSGALG00000015141 21 1 - - - - - - - - - 1.000 guanine deaminase [Source:HGNC Symbol;Acc:HGNC:4212]
6. FGF16 ENSGALG00000007806 8 1 - - - - - - - - - 1.000 fibroblast growth factor 16 [Source:NCBI gene;Acc:422330]
7. KCNA4 ENSGALG00000012142 6 1 - - - - - - - - - 1.000 potassium voltage-gated channel subfamily A member 4 [Source:NCBI gene;Acc:395721]
8. IL16 ENSGALG00000006388 3 1 - - - - - - - - - 1.000 interleukin 16 [Source:NCBI gene;Acc:374270]
9. PDCL2 ENSGALG00000013783 9 1 - - - - - - - - - 1.000 phosducin like 2 [Source:HGNC Symbol;Acc:HGNC:29524]
10. OPN4-1 ENSGALG00000041662 10 1 - - - - - - - - - 1.000 photopigment melanopsin-like [Source:NCBI gene;Acc:395334]
11. ENSGALG00000026501 ENSGALG00000026501 39 1 - - - - - - - - - 1.000
12. ENSGALG00000000443 ENSGALG00000000443 2 1 - - - - - - - - - 1.000
13. ENSGALG00000027597 ENSGALG00000027597 13 1 - - - - - - - - - 1.000
14. ABCB1LB ABCB1LB 4 1 - - - - - - - - - 1.000
15. CECR2 ENSGALG00000013034 12 1 - - - - - - - - - 1.000 CECR2, histone acetyl-lysine reader [Source:NCBI gene;Acc:418161]
16. LRRC47 7 1 - - - - - - - - - 1.000 leucine rich repeat containing 47
17. ISM2 ENSGALG00000010468 1 1 - - - - - - - - - 1.000 isthmin 2, transcript variant X2
18. CD40 ENSGALG00000007015 7 1 - - - - - - - - - 1.000 CD40 molecule [Source:NCBI gene;Acc:395385]
19. UPK3A ENSGALG00000014227 7 1 - - - - - - - - - 1.000 uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
20. DDO ENSGALG00000015057 25 1 - - - - - - - - - 1.000 D-aspartate oxidase [Source:HGNC Symbol;Acc:HGNC:2727]
21. TMC3 ENSGALG00000006376 12 1 - - - - - - - - - 1.000 transmembrane channel like 3 [Source:NCBI gene;Acc:415470]
22. VTG1 ENSGALG00000039354 17 1 - - - - - - - - - 1.000 vitellogenin 1 [Source:NCBI gene;Acc:424547]
23. C18H17ORF67 ENSGALG00000024428 10 1 - - - - - - - - - 1.000 chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
24. SNORD61 SNORD61 12 1 - - - - - - - - - 1.000
25. CALML3 ENSGALG00000008424 88 1 - - - - - - - - - 1.000 calmodulin like 3 [Source:NCBI gene;Acc:416692]
26. ENSGALG00000025879 ENSGALG00000025879 3 1 - - - - - - - - - 1.000
27. CLDN15 ENSGALG00000038964 21 1 - - - - - - - - - 1.000 claudin 15, transcript variant X4
28. ENSGALG00000024381 ENSGALG00000024381 9 1 - - - - - - - - - 1.000
29. ENPP3 ENSGALG00000037587 25 1 - - - - - - - - - 1.000 ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
30. CAMK1 ENSGALG00000029912 6 1 - - - - - - - - - 1.000 calcium/calmodulin dependent protein kinase I [Source:HGNC Symbol;Acc:HGNC:1459]
31. DCHS1 ENSGALG00000017334 12 0.992 - - - - - - - - - 0.992 dachsous cadherin-related 1, transcript variant X1
32. PPCDC ENSGALG00000001711 131 0.989 - - - - - - - 0.989 - - phosphopantothenoylcysteine decarboxylase [Source:HGNC Symbol;Acc:HGNC:28107]
33. COL21A1 ENSGALG00000016292 35 0.982 - - 0.982 - - - - - - - collagen type XXI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:17025]
34. MFN2 ENSGALG00000004523 10 0.979 - - - - - - - - - 0.979 mitofusin 2 [Source:HGNC Symbol;Acc:HGNC:16877]
35. ENSGALG00000012518 ENSGALG00000012518 25 0.977 - - 0.977 - - - - - - -
36. WNT6 ENSGALG00000011358 1886 0.974 - - - - - - - - - 0.974 Wnt family member 6 [Source:NCBI gene;Acc:395235]
37. SDR42E2 ENSGALG00000006964 57 0.934 - - - - - - - - - 0.934 short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
38. MTHFSD ENSGALG00000033322 824 0.934 - - - - - - - 0.934 - - methenyltetrahydrofolate synthetase domain containing [Source:HGNC Symbol;Acc:HGNC:25778]
39. CFD ENSGALG00000040832 222 0.933 - - 0.933 - - - - - - - complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
40. SRD5A2 ENSGALG00000010625 23 0.923 - - - - - - - - - 0.923 steroid 5 alpha-reductase 2 [Source:HGNC Symbol;Acc:HGNC:11285]
41. ENSGALG00000008594 ENSGALG00000008594 54 0.921 - - 0.921 - - - - - - -
42. CMTR1 ENSGALG00000010149 12 0.913 - - - - - - - - - 0.913 cap methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:21077]
43. TMEM72 ENSGALG00000026808 5 0.913 - - - - - - - - - 0.913 transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
44. CD320 ENSGALG00000021688 3 0.913 - - - - - - - - - 0.913 CD320 molecule [Source:NCBI gene;Acc:420066]
45. SCN1A ENSGALG00000010943 6 0.913 - - - - - - - - - 0.913 sodium voltage-gated channel alpha subunit 1 [Source:HGNC Symbol;Acc:HGNC:10585]
46. ZDHHC3 ENSGALG00000029266 11 0.907 - - - - - - - 0.907 - - zinc finger DHHC-type containing 3 [Source:HGNC Symbol;Acc:HGNC:18470]
47. ENSGALG00000023190 ENSGALG00000023190 4 0.907 - - - - - - - 0.907 - -
48. VSIG1 ENSGALG00000008290 16 0.907 - - - - - - - 0.907 - - V-set and immunoglobulin domain containing 1 [Source:NCBI gene;Acc:414795]
49. C18orf32 ENSGALG00000042000 114 0.907 - - - - - - - 0.907 - - chromosome 18 open reading frame 32 [Source:HGNC Symbol;Acc:HGNC:31690]
50. THSD7B ENSGALG00000012362 8 0.907 - - - - - - - 0.907 - - thrombospondin type 1 domain containing 7B [Source:HGNC Symbol;Acc:HGNC:29348]
51. TNFRSF9 9 0.907 - - - - - - - 0.907 - - tumor necrosis factor receptor superfamily member 9
52. ENSGALG00000004951 ENSGALG00000004951 18 0.907 - - - - - - - 0.907 - -
53. GUCA1A ENSGALG00000001431 6 0.907 - - - - - - - 0.907 - - guanylate cyclase activator 1A [Source:NCBI gene;Acc:374216]
54. HSD11B1L ENSGALG00000012860 4 0.907 - - - - - - - 0.907 - - hydroxysteroid 11-beta dehydrogenase 1 like [Source:NCBI gene;Acc:408034]
55. FAM181B ENSGALG00000046082 298 0.907 - - - - - - - 0.907 - - family with sequence similarity 181 member B [Source:HGNC Symbol;Acc:HGNC:28512]
56. MST MST 9 0.907 - - - - - - - 0.907 - -
57. ST6GALNAC3 ENSGALG00000009027 17 0.907 - - - - - - - 0.907 - - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:19343]
58. SH3D19 ENSGALG00000010081 52 0.907 - - - - - - - 0.907 - - SH3 domain containing 19 [Source:HGNC Symbol;Acc:HGNC:30418]
59. TMEM62 ENSGALG00000009260 1170 0.904 - - - - - - - 0.904 - - transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
60. TTLL9 ENSGALG00000006460 11 0.904 - - - - - - - 0.904 - - tubulin tyrosine ligase like 9 [Source:HGNC Symbol;Acc:HGNC:16118]
61. ADMP ENSGALG00000037408 24 0.899 - - - - - - - 0.899 - - anti-dorsalizing morphogenetic protein [Source:NCBI gene;Acc:395622]
62. CCDC92 ENSGALG00000003146 40 0.894 - - - - - - - 0.894 - - coiled-coil domain containing 92 [Source:HGNC Symbol;Acc:HGNC:29563]
63. LAMB4 ENSGALG00000007917 54 0.893 - - - - - - - - - 0.893 laminin subunit beta 4 [Source:NCBI gene;Acc:396076]
64. CPLX1 ENSGALG00000015332 55 0.891 - - - - - - - 0.891 - - complexin 1 [Source:HGNC Symbol;Acc:HGNC:2309]
65. RHBG ENSGALG00000013232 233 0.886 - - - - - - - 0.886 - - Rh family B glycoprotein [Source:NCBI gene;Acc:378792]
66. SLC5A11 ENSGALG00000005933 28 0.886 - - - - - - - 0.886 - - solute carrier family 5 member 11 [Source:HGNC Symbol;Acc:HGNC:23091]
67. PLEKHG4 ENSGALG00000023898 65 0.886 - - - - - - - 0.886 - - pleckstrin homology and RhoGEF domain containing G4 [Source:HGNC Symbol;Acc:HGNC:24501]
68. ENSGALG00000023692 ENSGALG00000023692 6 0.885 - - - - - - - 0.885 - -
69. DGKH ENSGALG00000016959 75 0.883 - - 0.883 - - - - - - - diacylglycerol kinase eta [Source:HGNC Symbol;Acc:HGNC:2854]
70. SNAP23 ENSGALG00000009097 36 0.878 - - - - - - 0.878 - - - synaptosome associated protein 23 [Source:NCBI gene;Acc:423235]
71. SPOP ENSGALG00000009939 670 0.876 - - - - - - - 0.876 - - speckle type BTB/POZ protein [Source:HGNC Symbol;Acc:HGNC:11254]
72. SBDS ENSGALG00000027989 112 0.875 - - 0.875 - - - - - - - SBDS, ribosome maturation factor [Source:NCBI gene;Acc:417477]
73. AGPAT2 ENSGALG00000023517 21 0.875 - - - - - - - 0.875 - - 1-acylglycerol-3-phosphate O-acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:325]
74. SLC22A13 ENSGALG00000005934 8 0.871 - - - - - - - - - 0.871 solute carrier family 22 member 13
75. RAX1 RAX1 44 0.87 - - 0.870 - - - - - - -
76. ARID3C ENSGALG00000005839 646 0.865 - - 0.865 - - - - - - - AT-rich interaction domain 3C [Source:HGNC Symbol;Acc:HGNC:21209]
77. NEIL3 ENSGALG00000010719 47 0.864 - - - - - - - 0.864 - - nei like DNA glycosylase 3 [Source:HGNC Symbol;Acc:HGNC:24573]
78. ARSD ENSGALG00000016648 33 0.863 - - - - - - - - - 0.863 arylsulfatase D, transcript variant X1
79. C2orf62 C2orf62 9 0.862 - - - - - - - 0.862 - -
80. NOXRED1 ENSGALG00000042509 27 0.862 - - - - - - - - - 0.862 NADP dependent oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20487]
81. GNAI1 ENSGALG00000008382 195 0.861 - - - - - - - 0.861 - - G protein subunit alpha i1 [Source:NCBI gene;Acc:396368]
82. HLF ENSGALG00000003059 148 0.86 - - - - - - - 0.860 - - HLF, PAR bZIP transcription factor [Source:HGNC Symbol;Acc:HGNC:4977]
83. ENSGALG00000015097 ENSGALG00000015097 93 0.858 - - - - - - - 0.858 - -
84. DGKG ENSGALG00000005721 17 0.85 - - - - 0.850 - - - - - diacylglycerol kinase gamma [Source:HGNC Symbol;Acc:HGNC:2853]
85. ACKR4 ENSGALG00000041491 7 0.85 - - - - 0.850 - - - - - atypical chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1611]
86. LRRC7 ENSGALG00000011284 13 0.85 - - - - 0.850 - - - - - leucine rich repeat containing 7 [Source:HGNC Symbol;Acc:HGNC:18531]
87. KIF26B ENSGALG00000010664 41 0.85 - - - - 0.850 - - - - - kinesin family member 26B [Source:HGNC Symbol;Acc:HGNC:25484]
88. ENSGALG00000011273 ENSGALG00000011273 9 0.85 - - - - 0.850 - - - - -
89. CXorf21 ENSGALG00000016286 4 0.85 - - - - 0.850 - - - - - chromosome X open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:25667]
90. HDAC3 ENSGALG00000002634 130 0.85 - - - - 0.850 - - - - - histone deacetylase 3 [Source:NCBI gene;Acc:395506]
91. AFF1 ENSGALG00000043935 34 0.85 - - - - 0.850 - - - - - AF4/FMR2 family member 1 [Source:HGNC Symbol;Acc:HGNC:7135]
92. ENSGALG00000010336 ENSGALG00000010336 16 0.85 - - - - 0.850 - - - - -
93. C9ORF9 C9ORF9 13 0.85 - - - - 0.850 - - - - -
94. EZH1 ENSGALG00000003068 30 0.85 - - - - 0.850 - - - - - enhancer of zeste 1 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3526]
95. CYTH4 ENSGALG00000012454 12 0.85 - - - - 0.850 - - - - - cytohesin 4 [Source:NCBI gene;Acc:418043]
96. UPK3B 4 0.85 - - - - 0.850 - - - - - uroplakin 3B
97. TRAF3IP3 ENSGALG00000001373 11 0.85 - - - - 0.850 - - - - - TRAF3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:30766]
98. CEP135 ENSGALG00000013776 232 0.847 - - - - - - - 0.847 - - centrosomal protein 135 [Source:HGNC Symbol;Acc:HGNC:29086]
99. SIN3B ENSGALG00000003771 60 0.846 - - - - - - - - - 0.846 SIN3 transcription regulator family member B [Source:HGNC Symbol;Acc:HGNC:19354]
100. CCDC149 ENSGALG00000014391 13 0.843 - - - - - - - - - 0.843 coiled-coil domain containing 149 [Source:HGNC Symbol;Acc:HGNC:25405]

There are 208 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA