Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for HOTAIRM1_1

Gene Name Gene ID Reads Annotation
HOTAIRM1_1 HOTAIRM1_1 1512







Genes with expression patterns similar to HOTAIRM1_1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. HOTAIRM1_1 HOTAIRM1_1 1512 6 1.000 1.000 1.000 1.000 1.000 1.000
2. Usp36 ENSMUSG00000033909 2464 0.909 - 0.909 - - - - ubiquitin specific peptidase 36 [Source:MGI Symbol;Acc:MGI:1919594]
3. Cxxc4 ENSMUSG00000044365 723 0.906 - 0.906 - - - - CXXC finger 4 [Source:MGI Symbol;Acc:MGI:2442112]
4. Cep192 ENSMUSG00000024542 1349 0.906 - 0.906 - - - - centrosomal protein 192 [Source:MGI Symbol;Acc:MGI:1918049]
5. Gm25735 ENSMUSG00000092905 617 0.905 - 0.905 - - - - predicted gene, 25735 [Source:MGI Symbol;Acc:MGI:5455512]
6. Csrp2bp 1398 0.904 - 0.904 - - - - cysteine and glycine-rich protein 2 binding protein, transcript variant 1
7. Syne4 ENSMUSG00000019737 724 0.901 - 0.901 - - - - spectrin repeat containing, nuclear envelope family member 4 [Source:MGI Symbol;Acc:MGI:2141950]
8. Gm26782 ENSMUSG00000097431 428 0.901 - 0.901 - - - - predicted gene, 26782 [Source:MGI Symbol;Acc:MGI:5477276]
9. Bckdha ENSMUSG00000060376 653 0.901 - 0.901 - - - - branched chain ketoacid dehydrogenase E1, alpha polypeptide [Source:MGI Symbol;Acc:MGI:107701]
10. Ing2 ENSMUSG00000063049 913 0.9 - 0.900 - - - - inhibitor of growth family, member 2 [Source:MGI Symbol;Acc:MGI:1916510]
11. Tnfrsf1a ENSMUSG00000030341 711 0.9 - 0.900 - - - - tumor necrosis factor receptor superfamily, member 1a [Source:MGI Symbol;Acc:MGI:1314884]
12. Fbxo25 ENSMUSG00000038365 940 0.899 - 0.899 - - - - F-box protein 25 [Source:MGI Symbol;Acc:MGI:1914072]
13. Klhl6 ENSMUSG00000043008 952 0.898 - 0.898 - - - - kelch-like 6 [Source:MGI Symbol;Acc:MGI:2686922]
14. Eed ENSMUSG00000030619 1900 0.898 - 0.898 - - - - embryonic ectoderm development [Source:MGI Symbol;Acc:MGI:95286]
15. Nradd ENSMUSG00000032491 668 0.897 - 0.897 - - - - neurotrophin receptor associated death domain [Source:MGI Symbol;Acc:MGI:1914419]
16. Gmppa ENSMUSG00000033021 462 0.896 - 0.896 - - - - GDP-mannose pyrophosphorylase A [Source:MGI Symbol;Acc:MGI:1916330]
17. Gatad2b ENSMUSG00000042390 1312 0.896 - 0.896 - - - - GATA zinc finger domain containing 2B [Source:MGI Symbol;Acc:MGI:2443225]
18. Twf2 ENSMUSG00000023277 849 0.896 - 0.896 - - - - twinfilin actin binding protein 2 [Source:MGI Symbol;Acc:MGI:1346078]
19. Hist1h3c ENSMUSG00000069310 508 0.895 - 0.895 - - - - histone cluster 1, H3c [Source:MGI Symbol;Acc:MGI:2448320]
20. Tmem186 ENSMUSG00000043140 711 0.895 - 0.895 - - - - transmembrane protein 186 [Source:MGI Symbol;Acc:MGI:1913940]
21. Cetn4 ENSMUSG00000045031 377 0.895 - 0.895 - - - - centrin 4 [Source:MGI Symbol;Acc:MGI:2677454]
22. Rhbdf1 ENSMUSG00000020282 1113 0.894 - 0.894 - - - - rhomboid 5 homolog 1 [Source:MGI Symbol;Acc:MGI:104328]
23. Sh3glb2 ENSMUSG00000026860 1046 0.894 - 0.894 - - - - SH3-domain GRB2-like endophilin B2 [Source:MGI Symbol;Acc:MGI:2385131]
24. Gm10713 Gm10713 1480 0.894 - 0.894 - - - -
25. Ppp4r4 ENSMUSG00000021209 242 0.894 - 0.894 - - - - protein phosphatase 4, regulatory subunit 4 [Source:MGI Symbol;Acc:MGI:1921771]
26. Car8 ENSMUSG00000041261 286 0.894 - 0.894 - - - - carbonic anhydrase 8 [Source:MGI Symbol;Acc:MGI:88253]
27. Man2a1 ENSMUSG00000024085 1658 0.894 - 0.894 - - - - mannosidase 2, alpha 1 [Source:MGI Symbol;Acc:MGI:104669]
28. Btbd9 ENSMUSG00000062202 1289 0.894 - 0.894 - - - - BTB (POZ) domain containing 9 [Source:MGI Symbol;Acc:MGI:1916625]
29. Mcc ENSMUSG00000071856 4024 0.894 - 0.894 - - - - mutated in colorectal cancers [Source:MGI Symbol;Acc:MGI:96930]
30. Zfp71-rs1 Zfp71-rs1 629 0.894 - 0.894 - - - -
31. Gm26981 ENSMUSG00000098041 717 0.894 - 0.894 - - - - predicted gene, 26981 [Source:MGI Symbol;Acc:MGI:5504096]
32. Suclg2 ENSMUSG00000061838 465 0.894 - 0.894 - - - - succinate-Coenzyme A ligase, GDP-forming, beta subunit [Source:MGI Symbol;Acc:MGI:1306824]
33. Kcnk5 ENSMUSG00000023243 191 0.893 - 0.893 - - - - potassium channel, subfamily K, member 5 [Source:MGI Symbol;Acc:MGI:1336175]
34. Larp7 ENSMUSG00000027968 2270 0.893 - 0.893 - - - - La ribonucleoprotein domain family, member 7 [Source:MGI Symbol;Acc:MGI:107634]
35. Decr2 ENSMUSG00000036775 1047 0.893 - 0.893 - - - - 2-4-dienoyl-Coenzyme A reductase 2, peroxisomal [Source:MGI Symbol;Acc:MGI:1347059]
36. Lonp2 ENSMUSG00000047866 1312 0.892 - 0.892 - - - - lon peptidase 2, peroxisomal [Source:MGI Symbol;Acc:MGI:1914137]
37. Frk ENSMUSG00000019779 639 0.892 - 0.892 - - - - fyn-related kinase [Source:MGI Symbol;Acc:MGI:103265]
38. Trim8 ENSMUSG00000025034 1494 0.892 - 0.892 - - - - tripartite motif-containing 8 [Source:MGI Symbol;Acc:MGI:1933302]
39. Tmem126b ENSMUSG00000030614 743 0.892 - 0.892 - - - - transmembrane protein 126B [Source:MGI Symbol;Acc:MGI:1915722]
40. Tmem135 ENSMUSG00000039428 946 0.891 - 0.891 - - - - transmembrane protein 135 [Source:MGI Symbol;Acc:MGI:1920009]
41. Dync2h1 ENSMUSG00000047193 880 0.89 - 0.890 - - - - dynein cytoplasmic 2 heavy chain 1 [Source:MGI Symbol;Acc:MGI:107736]
42. Apoo ENSMUSG00000079508 815 0.89 - 0.890 - - - - apolipoprotein O [Source:MGI Symbol;Acc:MGI:1915566]
43. Cars2 ENSMUSG00000056228 492 0.89 - 0.890 - - - - cysteinyl-tRNA synthetase 2 (mitochondrial)(putative) [Source:MGI Symbol;Acc:MGI:1919191]
44. Extl1 ENSMUSG00000028838 63 0.889 - 0.889 - - - - exostoses (multiple)-like 1 [Source:MGI Symbol;Acc:MGI:1888742]
45. Pabpc4l ENSMUSG00000090919 1259 0.889 - 0.889 - - - - poly(A) binding protein, cytoplasmic 4-like [Source:MGI Symbol;Acc:MGI:3643087]
46. Gm12942 332 0.889 - 0.889 - - - - predicted gene 12942
47. Zfp369 ENSMUSG00000021514 1130 0.889 - 0.889 - - - - zinc finger protein 369 [Source:MGI Symbol;Acc:MGI:2176229]
48. Zbtb12 ENSMUSG00000049823 373 0.888 - 0.888 - - - - zinc finger and BTB domain containing 12 [Source:MGI Symbol;Acc:MGI:88133]
49. Zfp865 ENSMUSG00000074405 1223 0.888 - 0.888 - - - - zinc finger protein 865 [Source:MGI Symbol;Acc:MGI:2442656]
50. Rpl27-ps2 ENSMUSG00000082171 89 0.887 - 0.887 - - - - ribosomal protein L27, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3649792]
51. 4632419I22Rik 4632419I22Rik 1839 0.887 - 0.887 - - - -
52. Pom121 ENSMUSG00000053293 574 0.887 - 0.887 - - - - nuclear pore membrane protein 121 [Source:MGI Symbol;Acc:MGI:2137624]
53. Pla2g15 ENSMUSG00000031903 321 0.887 - 0.887 - - - - phospholipase A2, group XV [Source:MGI Symbol;Acc:MGI:2178076]
54. Rab11fip5 ENSMUSG00000051343 496 0.887 - 0.887 - - - - RAB11 family interacting protein 5 (class I) [Source:MGI Symbol;Acc:MGI:1098586]
55. Cyp27a1 ENSMUSG00000026170 153 0.887 - 0.887 - - - - cytochrome P450, family 27, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:88594]
56. Plekhm1 ENSMUSG00000034247 251 0.886 - 0.886 - - - - pleckstrin homology domain containing, family M (with RUN domain) member 1 [Source:MGI Symbol;Acc:MGI:2443207]
57. Pik3r2 ENSMUSG00000031834, ENSMUSG00000111826 1072 0.886 - 0.886 - - - - phosphoinositide-3-kinase regulatory subunit 2 [Source:MGI Symbol;Acc:MGI:1098772]
58. Ptges3l ENSMUSG00000097487 146 0.886 - 0.886 - - - - prostaglandin E synthase 3 like [Source:MGI Symbol;Acc:MGI:1916146]
59. Gm25734 Gm25734 104 0.886 - 0.886 - - - -
60. Tmem26 ENSMUSG00000060044 379 0.885 - 0.885 - - - - transmembrane protein 26 [Source:MGI Symbol;Acc:MGI:2143537]
61. Smpd3 ENSMUSG00000031906 194 0.885 - 0.885 - - - - sphingomyelin phosphodiesterase 3, neutral [Source:MGI Symbol;Acc:MGI:1927578]
62. Atg3 ENSMUSG00000022663 1323 0.885 - 0.885 - - - - autophagy related 3 [Source:MGI Symbol;Acc:MGI:1915091]
63. Gm7327 ENSMUSG00000050900 249 0.885 - 0.885 - - - - predicted gene 7327 [Source:MGI Symbol;Acc:MGI:3646274]
64. Slc38a3 ENSMUSG00000010064 147 0.885 - 0.885 - - - - solute carrier family 38, member 3 [Source:MGI Symbol;Acc:MGI:1923507]
65. Ap2a1 ENSMUSG00000060279 108 0.885 - 0.885 - - - - adaptor-related protein complex 2, alpha 1 subunit [Source:MGI Symbol;Acc:MGI:101921]
66. Smim4 ENSMUSG00000058351 454 0.885 - 0.885 - - - - small integral membrane protein 4 [Source:MGI Symbol;Acc:MGI:1913737]
67. Mrpl44 ENSMUSG00000026248 1593 0.884 - 0.884 - - - - mitochondrial ribosomal protein L44 [Source:MGI Symbol;Acc:MGI:1916413]
68. 2610035D17Rik ENSMUSG00000087259 651 0.884 - 0.884 - - - - RIKEN cDNA 2610035D17 gene [Source:MGI Symbol;Acc:MGI:1919636]
69. Usp35 ENSMUSG00000035713 112 0.884 - 0.884 - - - - ubiquitin specific peptidase 35 [Source:MGI Symbol;Acc:MGI:2685339]
70. Pdpr ENSMUSG00000033624 123 0.884 - 0.884 - - - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:MGI Symbol;Acc:MGI:2442188]
71. AK129341 AK129341 204 0.884 - 0.884 - - - -
72. Hsdl2 ENSMUSG00000028383 1294 0.883 - 0.883 - - - - hydroxysteroid dehydrogenase like 2 [Source:MGI Symbol;Acc:MGI:1919729]
73. Dhx34 ENSMUSG00000006019 240 0.882 - 0.882 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:MGI Symbol;Acc:MGI:1918973]
74. 0610009B22Rik ENSMUSG00000007777 752 0.882 - 0.882 - - - - RIKEN cDNA 0610009B22 gene [Source:MGI Symbol;Acc:MGI:1913300]
75. Cd302 ENSMUSG00000060703 214 0.882 - 0.882 - - - - CD302 antigen [Source:MGI Symbol;Acc:MGI:1913455]
76. Cops8 ENSMUSG00000034432 3968 0.881 - 0.881 - - - - COP9 signalosome subunit 8 [Source:MGI Symbol;Acc:MGI:1915363]
77. Zfp157 ENSMUSG00000036898 1185 0.881 - 0.881 - - - - zinc finger protein 157 [Source:MGI Symbol;Acc:MGI:1919404]
78. Uvrag ENSMUSG00000035354 908 0.88 - 0.880 - - - - UV radiation resistance associated gene [Source:MGI Symbol;Acc:MGI:1925860]
79. Rbm12b1 ENSMUSG00000046667 331 0.88 - 0.880 - - - - RNA binding motif protein 12 B1 [Source:MGI Symbol;Acc:MGI:1919647]
80. Rad51ap1 ENSMUSG00000030346 1698 0.88 - 0.880 - - - - RAD51 associated protein 1 [Source:MGI Symbol;Acc:MGI:1098224]
81. Inadl 509 0.88 - 0.880 - - - - InaD-like (Drosophila), transcript variant X9
82. Tmcc1 ENSMUSG00000030126 2753 0.88 - 0.880 - - - - transmembrane and coiled coil domains 1 [Source:MGI Symbol;Acc:MGI:2442368]
83. Gm5776 ENSMUSG00000099647 589 0.88 - 0.880 - - - - predicted gene 5776 [Source:MGI Symbol;Acc:MGI:3647650]
84. Mrps18a ENSMUSG00000023967 955 0.879 - 0.879 - - - - mitochondrial ribosomal protein S18A [Source:MGI Symbol;Acc:MGI:1915815]
85. 9930021J03Rik ENSMUSG00000046138 2964 0.879 - 0.879 - - - - RIKEN cDNA 9930021J03 gene [Source:MGI Symbol;Acc:MGI:2444398]
86. Ndufb4 ENSMUSG00000022820 1605 0.879 - 0.879 - - - - NADH:ubiquinone oxidoreductase subunit B4 [Source:MGI Symbol;Acc:MGI:1915444]
87. 2210408I21Rik ENSMUSG00000071252 189 0.878 - 0.878 - - - - RIKEN cDNA 2210408I21 gene [Source:MGI Symbol;Acc:MGI:1919621]
88. Lnp 1121 0.878 - 0.878 - - - - limb and neural patterns, transcript variant X4
89. Ift88 ENSMUSG00000040040 557 0.878 - 0.878 - - - - intraflagellar transport 88 [Source:MGI Symbol;Acc:MGI:98715]
90. Osbpl2 ENSMUSG00000039050 960 0.878 - 0.878 - - - - oxysterol binding protein-like 2 [Source:MGI Symbol;Acc:MGI:2442832]
91. Gm4944 968 0.877 - 0.877 - - - - predicted gene 4944
92. Harbi1 ENSMUSG00000027243 348 0.877 - 0.877 - - - - harbinger transposase derived 1 [Source:MGI Symbol;Acc:MGI:2443194]
93. Coa6 ENSMUSG00000051671 731 0.877 - 0.877 - - - - cytochrome c oxidase assembly factor 6 [Source:MGI Symbol;Acc:MGI:1915142]
94. Plekhg2 ENSMUSG00000037552 2138 0.876 - 0.876 - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 2 [Source:MGI Symbol;Acc:MGI:2141874]
95. Mical2 ENSMUSG00000038244 295 0.876 - 0.876 - - - - microtubule associated monooxygenase, calponin and LIM domain containing 2 [Source:MGI Symbol;Acc:MGI:2444947]
96. Prkag1 ENSMUSG00000067713 1318 0.876 - 0.876 - - - - protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:MGI Symbol;Acc:MGI:108411]
97. Zfp707 ENSMUSG00000034429 447 0.875 - 0.875 - - - - zinc finger protein 707 [Source:MGI Symbol;Acc:MGI:1916270]
98. Zfx ENSMUSG00000079509 2261 0.875 - 0.875 - - - - zinc finger protein X-linked [Source:MGI Symbol;Acc:MGI:99211]
99. Bri3bp ENSMUSG00000037905 6269 0.875 - 0.875 - - - - Bri3 binding protein [Source:MGI Symbol;Acc:MGI:1924059]
100. Zfp11 ENSMUSG00000051034 218 0.875 - 0.875 - - - - zinc finger protein 11 [Source:MGI Symbol;Acc:MGI:99156]

There are 239 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA