Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HOTAIR

Gene Name Gene ID Reads Annotation
HOTAIR ENSG00000228630 10 HOX transcript antisense RNA [Source:HGNC Symbol;Acc:HGNC:33510]



Genes with expression patterns similar to HOTAIR

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. HOTAIR ENSG00000228630 10 2 1.000 1.000 HOX transcript antisense RNA [Source:HGNC Symbol;Acc:HGNC:33510]
2. LINC01168 ENSG00000240707 1 0.989 - 0.989 long intergenic non-protein coding RNA 1168 [Source:HGNC Symbol;Acc:HGNC:49537]
3. PRSS38 ENSG00000185888 1 0.989 - 0.989 serine protease 38 [Source:HGNC Symbol;Acc:HGNC:29625]
4. FAM72C ENSG00000263513 1 0.989 - 0.989 family with sequence similarity 72 member C [Source:HGNC Symbol;Acc:HGNC:30602]
5. SNORD11B ENSG00000271852 1 0.989 - 0.989 small nucleolar RNA, C/D box 11B [Source:HGNC Symbol;Acc:HGNC:33571]
6. LOC100505811 LOC100505811 1 0.989 - 0.989
7. KRTAP5-2 ENSG00000205867, ENSG00000278489, ENSG00000281533 2 0.989 - 0.989 keratin associated protein 5-2 [Source:HGNC Symbol;Acc:HGNC:23597]
8. VENTXP1 ENSG00000259849 1 0.989 - 0.989 VENT homeobox pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:30900]
9. ATP6V0CP3 ENSG00000213435 1 0.989 - 0.989 ATPase H+ transporting V0 subunit c pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:40001]
10. MTOR-AS1 ENSG00000225602 1 0.989 - 0.989 MTOR antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40242]
11. OPA1-AS1 ENSG00000224855 1 0.989 - 0.989 OPA1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40421]
12. LINC00410 ENSG00000231674 1 0.989 - 0.989 long intergenic non-protein coding RNA 410 [Source:HGNC Symbol;Acc:HGNC:42742]
13. RGPD4-AS1 ENSG00000230651 1 0.989 - 0.989 RGPD4 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:49273]
14. EQTN ENSG00000120160 5 0.989 - 0.989 equatorin [Source:HGNC Symbol;Acc:HGNC:1359]
15. LOC101927926 3 0.989 - 0.989 uncharacterized LOC101927926
16. CLDN20 ENSG00000171217 1 0.989 - 0.989 claudin 20 [Source:HGNC Symbol;Acc:HGNC:2042]
17. LINC01432 ENSG00000234435 1 0.989 - 0.989 long intergenic non-protein coding RNA 1432 [Source:HGNC Symbol;Acc:HGNC:50745]
18. FOLH1B ENSG00000134612 2 0.982 - 0.982 folate hydrolase 1B [Source:HGNC Symbol;Acc:HGNC:13636]
19. TSPEAR-AS2 ENSG00000182912 1 0.981 - 0.981 TSPEAR antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:16428]
20. ESX1 ENSG00000123576 4 0.98 - 0.980 ESX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:14865]
21. ANKRD26P3 ENSG00000237636 2 0.975 - 0.975 ankyrin repeat domain 26 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:39689]
22. PLA2G5 ENSG00000127472 2 0.975 - 0.975 phospholipase A2 group V [Source:HGNC Symbol;Acc:HGNC:9038]
23. LINC00359 3 0.945 - 0.945 long intergenic non-protein coding RNA 359
24. LINC00208 ENSG00000170983 7 0.945 - 0.945 long intergenic non-protein coding RNA 208 [Source:HGNC Symbol;Acc:HGNC:15535]
25. LOC100506142 4 0.931 - 0.931 uncharacterized LOC100506142
26. CCL8 ENSG00000108700 10 0.917 - 0.917 C-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:10635]
27. F9 ENSG00000101981 2 0.898 - 0.898 coagulation factor IX [Source:HGNC Symbol;Acc:HGNC:3551]
28. ABCC6P1 ENSG00000256340 37 0.896 - 0.896 ATP binding cassette subfamily C member 6 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:33352]
29. KCNC4-AS1 3 0.88 - 0.880 KCNC4 antisense RNA 1 (head to head)
30. SLC25A48 ENSG00000145832 19 0.878 0.878 - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
31. IBSP ENSG00000029559 1 0.863 - 0.863 integrin binding sialoprotein [Source:HGNC Symbol;Acc:HGNC:5341]
32. C10orf95 ENSG00000120055 1 0.857 - 0.857 chromosome 10 open reading frame 95 [Source:HGNC Symbol;Acc:HGNC:25880]
33. GCSAML ENSG00000169224 47 0.846 - 0.846 germinal center associated signaling and motility like [Source:HGNC Symbol;Acc:HGNC:29583]
34. Sep-12 Sep-12 20 0.825 0.825 -
35. HTR3A ENSG00000166736 15 0.823 - 0.823 5-hydroxytryptamine receptor 3A [Source:HGNC Symbol;Acc:HGNC:5297]
36. LINC00624 ENSG00000278811 6 0.818 - 0.818 long intergenic non-protein coding RNA 624 [Source:HGNC Symbol;Acc:HGNC:44254]
37. GPR158-AS1 ENSG00000233642 12 0.801 - 0.801 GPR158 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44163]
38. CDK15 ENSG00000138395 37 0.788 0.788 - cyclin dependent kinase 15 [Source:HGNC Symbol;Acc:HGNC:14434]
39. WBP1 ENSG00000239779 13 0.767 0.767 - WW domain binding protein 1 [Source:HGNC Symbol;Acc:HGNC:12737]
40. SNAI3-AS1 ENSG00000260630 25 0.751 0.751 - SNAI3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:28327]
41. CLEC4C ENSG00000198178 7 0.747 0.747 - C-type lectin domain family 4 member C [Source:HGNC Symbol;Acc:HGNC:13258]
42. GSTA7P ENSG00000237674 3 0.747 0.747 - glutathione S-transferase alpha 7, pseudogene [Source:HGNC Symbol;Acc:HGNC:4631]
43. ATP6V1G3 ENSG00000151418, ENSG00000263014 3 0.747 0.747 - ATPase H+ transporting V1 subunit G3 [Source:HGNC Symbol;Acc:HGNC:18265]
44. LOC101928063 5 0.747 0.747 - uncharacterized LOC101928063
45. GPR87 ENSG00000138271 5 0.747 0.747 - G protein-coupled receptor 87 [Source:HGNC Symbol;Acc:HGNC:4538]
46. KRT23 ENSG00000108244, ENSG00000263309 11 0.747 0.747 - keratin 23 [Source:HGNC Symbol;Acc:HGNC:6438]
47. EXOC3L1 ENSG00000179044 12 0.747 0.747 - exocyst complex component 3 like 1 [Source:HGNC Symbol;Acc:HGNC:27540]
48. PRKACG ENSG00000165059 3 0.747 0.747 - protein kinase cAMP-activated catalytic subunit gamma [Source:HGNC Symbol;Acc:HGNC:9382]
49. LOC284080 6 0.747 0.747 - uncharacterized LOC284080
50. RAPGEF4-AS1 ENSG00000228016 4 0.747 0.747 - RAPGEF4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:28081]
51. LOC101927285 3 0.747 0.747 - uncharacterized LOC101927285
52. LOC103091866 3 0.747 0.747 - uncharacterized LOC103091866, transcript variant 5
53. OR4K2 ENSG00000165762 3 0.747 0.747 - olfactory receptor family 4 subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:14728]
54. SVOPL ENSG00000157703 5 0.738 - 0.738 SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
55. LOC101927572 14 0.723 0.723 - uncharacterized LOC101927572
56. LOC101927768 14 0.722 0.722 - uncharacterized LOC101927768
57. LOC286190 LOC286190 11 0.72 0.720 -
58. CYP2A6 ENSG00000255974 13 0.717 - 0.717 cytochrome P450 family 2 subfamily A member 6 [Source:HGNC Symbol;Acc:HGNC:2610]
59. LOC101060542 3 0.715 - 0.715 uncharacterized LOC101060542
60. SCNM1 ENSG00000163156 5 0.712 - 0.712 sodium channel modifier 1 [Source:HGNC Symbol;Acc:HGNC:23136]
61. MKRN9P ENSG00000258128 4 0.704 - 0.704 makorin ring finger protein 9, pseudogene [Source:HGNC Symbol;Acc:HGNC:7116]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA