Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HOMER3_1

Gene Name Gene ID Reads Annotation
HOMER3_1 ENSGALG00000003058, ENSGALG00000003074 1364 homer scaffolding protein 3, transcript variant X4











Genes with expression patterns similar to HOMER3_1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HOMER3_1 ENSGALG00000003058, ENSGALG00000003074 1364 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 homer scaffolding protein 3, transcript variant X4
2. GLE1 ENSGALG00000004738 6483 1.468 - - - - - - 0.759 0.709 - - GLE1, RNA export mediator [Source:HGNC Symbol;Acc:HGNC:4315]
3. SRSF1 ENSGALG00000005525 4376 1.426 - - - - - - 0.716 0.710 - - serine and arginine rich splicing factor 1 [Source:NCBI gene;Acc:772264]
4. NDST2 ENSGALG00000005107 4224 0.844 - - - - - - - 0.844 - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
5. INTS6L ENSGALG00000006157 2303 0.828 - - - - - - - 0.828 - - integrator complex subunit 6 like, transcript variant X6
6. SEMA4B ENSGALG00000008297 11202 0.812 - - - - - - - 0.812 - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
7. RSRC1 ENSGALG00000009669 5829 0.809 - - - - - - - 0.809 - - arginine and serine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:24152]
8. SAT1 ENSGALG00000016348 8469 0.805 - - - - - - - 0.805 - - spermidine/spermine N1-acetyltransferase 1 [Source:NCBI gene;Acc:374006]
9. MFN1 ENSGALG00000041873 4170 0.797 - - - - - - 0.797 - - - mitofusin 1 [Source:NCBI gene;Acc:424973]
10. SRSF5 ENSGALG00000009421 8502 0.796 - - - - - - - 0.796 - - serine and arginine rich splicing factor 5 [Source:NCBI gene;Acc:423258]
11. PCF11 ENSGALG00000017249 4714 0.795 - - - - - - - 0.795 - - PCF11 cleavage and polyadenylation factor subunit, transcript variant X4
12. TBC1D15 ENSGALG00000010190 4417 0.793 - - - - - - - 0.793 - - TBC1 domain family member 15 [Source:NCBI gene;Acc:417857]
13. BCAS3 ENSGALG00000005295 2595 0.792 - - - - - - 0.792 - - - BCAS3, microtubule associated cell migration factor [Source:HGNC Symbol;Acc:HGNC:14347]
14. RANBP9 ENSGALG00000012696 4871 0.792 - - - - - - - 0.792 - - RAN binding protein 9 [Source:HGNC Symbol;Acc:HGNC:13727]
15. MPRIP ENSGALG00000004798 6700 0.791 - - - - - - - 0.791 - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
16. NDUFS5 ENSGALG00000003625 27698 0.791 - - - - - - - 0.791 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
17. COL18A1 ENSGALG00000038311 11934 0.789 - - - - - - - 0.789 - - collagen type XVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2195]
18. MAK16 ENSGALG00000001663 7455 0.787 - - - - - - 0.787 - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
19. LRP12 ENSGALG00000033630 2534 0.787 - - - - - - - 0.787 - - LDL receptor related protein 12 [Source:HGNC Symbol;Acc:HGNC:31708]
20. LPAR4 ENSGALG00000004121 2543 0.786 - - - - - - - 0.786 - - lysophosphatidic acid receptor 4 [Source:NCBI gene;Acc:422149]
21. DCAF17 ENSGALG00000037327 1069 0.78 - - - - - - - 0.780 - - DDB1 and CUL4 associated factor 17 [Source:HGNC Symbol;Acc:HGNC:25784]
22. C4orf27 C4orf27 16724 0.774 - - - - - - - 0.774 - -
23. RUFY2 1442 0.771 - - - - - - - 0.771 - - RUN and FYVE domain containing 2, transcript variant X1
24. PEX14 ENSGALG00000002836 947 0.769 - - - - - - - 0.769 - - peroxisomal biogenesis factor 14 [Source:HGNC Symbol;Acc:HGNC:8856]
25. NARG2 NARG2 2294 0.768 - - - - - - 0.768 - - -
26. CCNG2 ENSGALG00000010347 9122 0.767 - - - - - - - 0.767 - - cyclin G2 [Source:HGNC Symbol;Acc:HGNC:1593]
27. ANKZF1 ENSGALG00000011332 2247 0.765 - - - - - - - 0.765 - - ankyrin repeat and zinc finger domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25527]
28. PTPA ENSGALG00000036965 2366 0.765 - - - - - - - 0.765 - - protein phosphatase 2 phosphatase activator [Source:NCBI gene;Acc:426329]
29. AVL9 ENSGALG00000041568 1558 0.764 - - - - - - - 0.764 - - AVL9 cell migration associated [Source:HGNC Symbol;Acc:HGNC:28994]
30. TRMT5 ENSGALG00000011904 1857 0.762 - - - - - - - 0.762 - - tRNA methyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:23141]
31. RALGAPA1 ENSGALG00000010088 6005 0.761 - - - - - - - 0.761 - - Ral GTPase activating protein catalytic alpha subunit 1 [Source:NCBI gene;Acc:423327]
32. METTL21A ENSGALG00000008493 3188 0.76 - - - - - - - 0.760 - - methyltransferase like 21A [Source:NCBI gene;Acc:424094]
33. TTYH3 ENSGALG00000004310 7422 0.76 - - - - - - - 0.760 - - tweety family member 3 [Source:HGNC Symbol;Acc:HGNC:22222]
34. ATPAF1 ENSGALG00000010444 3677 0.76 - - - - - - 0.760 - - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
35. PMS1 ENSGALG00000034011 2031 0.759 - - - - - - - 0.759 - - PMS1 homolog 1, mismatch repair system component [Source:NCBI gene;Acc:423980]
36. IFNGR2 ENSGALG00000032660 2634 0.759 - - - - - - - 0.759 - - interferon gamma receptor 2 [Source:NCBI gene;Acc:418502]
37. MIB1 ENSGALG00000014974 3583 0.759 - - - - - - - 0.759 - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
38. ARL13B ENSGALG00000015412 2968 0.759 - - - - - - - 0.759 - - ADP ribosylation factor like GTPase 13B [Source:HGNC Symbol;Acc:HGNC:25419]
39. SETD3 ENSGALG00000034802 4125 0.757 - - - - - - 0.757 - - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
40. APITD1 APITD1 11830 0.757 - - - - - - - 0.757 - -
41. GLI2 ENSGALG00000011630 3347 0.756 - - - - - - - 0.756 - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
42. NUP214 ENSGALG00000041111 4902 0.756 - - - - - - - 0.756 - - nucleoporin 214 [Source:HGNC Symbol;Acc:HGNC:8064]
43. ENSGALG00000028938 ENSGALG00000028938 18616 0.756 - - - - - - - 0.756 - -
44. CRIP1 ENSGALG00000002771 4270 0.755 - - - - - - 0.755 - - - cysteine rich protein 1 [Source:NCBI gene;Acc:101747696]
45. ACAD11 ENSGALG00000035949 5483 0.755 - - - - - - - 0.755 - - acyl-CoA dehydrogenase family member 11 [Source:NCBI gene;Acc:420689]
46. C12H3ORF37 C12H3ORF37 6362 0.755 - - - - - - - 0.755 - -
47. SECISBP2 ENSGALG00000010694 6990 0.755 - - - - - - 0.755 - - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
48. ZADH2 ENSGALG00000022882 11790 0.755 - - - - - - - 0.755 - - zinc binding alcohol dehydrogenase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28697]
49. TFDP2 ENSGALG00000025759 13407 0.751 - - - - - - - 0.751 - - transcription factor Dp-2 [Source:NCBI gene;Acc:424780]
50. FGF12 ENSGALG00000036971 2631 0.751 - - - - - - - 0.751 - - fibroblast growth factor 12 [Source:NCBI gene;Acc:395704]
51. BLCAP ENSGALG00000027126 12200 0.75 - - - - - - 0.750 - - - BLCAP, apoptosis inducing factor [Source:NCBI gene;Acc:100857695]
52. TSEN54 3192 0.749 - - - - - - 0.749 - - - tRNA splicing endonuclease subunit 54, transcript variant X2
53. EXOSC10 ENSGALG00000003086 3223 0.748 - - - - - - - 0.748 - - exosome component 10 [Source:NCBI gene;Acc:419454]
54. NEK3 ENSGALG00000017024 696 0.747 - - - - - - 0.747 - - - NIMA related kinase 3 [Source:HGNC Symbol;Acc:HGNC:7746]
55. SNRNP27 ENSGALG00000013883 22212 0.747 - - - - - - 0.747 - - - small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]
56. R3HDM1 ENSGALG00000012246 6580 0.746 - - - - - - - 0.746 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
57. DNMT3B ENSGALG00000041461 12959 0.745 - - - - - - - 0.745 - - DNA methyltransferase 3 beta [Source:NCBI gene;Acc:419287]
58. LTV1 ENSGALG00000013765 2917 0.745 - - - - - - 0.745 - - - LTV1 ribosome biogenesis factor
59. FBXO21 ENSGALG00000008201 2608 0.743 - - - - - - - 0.743 - - F-box protein 21 [Source:HGNC Symbol;Acc:HGNC:13592]
60. PSME4 ENSGALG00000008163 544 0.743 - - - - - - - 0.743 - - proteasome activator subunit 4 [Source:NCBI gene;Acc:421218]
61. PAPSS1 ENSGALG00000010542 5631 0.743 - - - - - - - 0.743 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
62. PTTG1 17936 0.743 - - - - - - 0.743 - - - pituitary tumor-transforming 1, transcript variant X1
63. SPDL1 ENSGALG00000001942 4403 0.742 - - - - - - 0.742 - - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
64. MRPL40 ENSGALG00000001587 20893 0.742 - - - - - - 0.742 - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
65. CNOT11 ENSGALG00000039563 11251 0.741 - - - - - - - 0.741 - - CCR4-NOT transcription complex subunit 11
66. NDUFC2 ENSGALG00000029172 26136 0.741 - - - - - - 0.741 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
67. KLHL21 ENSGALG00000035211 6145 0.74 - - - - - - 0.740 - - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
68. PEMT ENSGALG00000004875 4094 0.74 - - - - - - - 0.740 - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
69. TMED3 ENSGALG00000008272 2838 0.739 - - - - - - - 0.739 - - transmembrane p24 trafficking protein 3 [Source:NCBI gene;Acc:415580]
70. DHX38 ENSGALG00000000787 6913 0.735 - - - - - - 0.735 - - - DEAH-box helicase 38 [Source:NCBI gene;Acc:415875]
71. TMEM43 ENSGALG00000006345 2284 0.734 - - - - - - - 0.734 - - transmembrane protein 43
72. HOXB-7 HOXB-7 2066 0.734 - - - - - - 0.734 - - -
73. Sep-09 Sep-09 4723 0.734 - - - - - - - 0.734 - -
74. NIPA2 ENSGALG00000016737 3792 0.734 - - - - - - - 0.734 - - NIPA magnesium transporter 2 [Source:NCBI gene;Acc:418680]
75. DDX10 ENSGALG00000017156 5657 0.733 - - - - - - - 0.733 - - DEAD-box helicase 10 [Source:NCBI gene;Acc:418965]
76. TFDP1 ENSGALG00000016823 17019 0.733 - - - - - - 0.733 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
77. NCDN ENSGALG00000002408 6180 0.732 - - - - - - 0.732 - - - neurochondrin [Source:NCBI gene;Acc:419633]
78. TSEN15 ENSGALG00000004782 2520 0.732 - - - - - - 0.732 - - - tRNA splicing endonuclease subunit 15 [Source:HGNC Symbol;Acc:HGNC:16791]
79. DDX42 ENSGALG00000000581 8780 0.731 - - - - - - - 0.731 - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
80. SNX5 ENSGALG00000008691 2108 0.731 - - - - - - 0.731 - - - sorting nexin 5 [Source:NCBI gene;Acc:416718]
81. GSK3B ENSGALG00000014977 7950 0.731 - - - - - - - 0.731 - - glycogen synthase kinase 3 beta [Source:HGNC Symbol;Acc:HGNC:4617]
82. SALL4 ENSGALG00000041365 6760 0.731 - - - - - - 0.731 - - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
83. DMD ENSGALG00000016281 5657 0.73 - - - - - - 0.730 - - - dystrophin [Source:NCBI gene;Acc:396236]
84. KIAA1609 KIAA1609 1749 0.73 - - - - - - - 0.730 - -
85. RTCB ENSGALG00000012611 14360 0.73 - - - - - - 0.730 - - - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:HGNC Symbol;Acc:HGNC:26935]
86. C2orf44 C2orf44 2869 0.729 - - - - - - - 0.729 - -
87. RARRES2 ENSGALG00000042642 3043 0.729 - - - - - - - 0.729 - - retinoic acid receptor responder (tazarotene induced) 2 [Source:NCBI gene;Acc:420366]
88. NDE1 ENSGALG00000032590 3277 0.729 - - - - - - 0.729 - - - nudE neurodevelopment protein 1 [Source:NCBI gene;Acc:416597]
89. HMG20A ENSGALG00000041641 5818 0.728 - - - - - - - 0.728 - - high mobility group 20A [Source:NCBI gene;Acc:415346]
90. KLHDC3 ENSGALG00000008536 1961 0.728 - - - - - - 0.728 - - - kelch domain containing 3 [Source:HGNC Symbol;Acc:HGNC:20704]
91. ANXA1 ENSGALG00000015148 13804 0.728 - - - - - - - 0.728 - - annexin A1 [Source:NCBI gene;Acc:404271]
92. ANAPC1 ENSGALG00000008254 2519 0.726 - - - - - - 0.726 - - - anaphase promoting complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19988]
93. TAF7 4725 0.725 - - - - - - 0.725 - - - TATA-box binding protein associated factor 7, transcript variant X1
94. ZZZ3 ENSGALG00000008988 3132 0.725 - - - - - - 0.725 - - - zinc finger ZZ-type containing 3, transcript variant X5
95. CHTF8 ENSGALG00000000632 7230 0.724 - - - - - - 0.724 - - - chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
96. PSMD2 ENSGALG00000006294 6805 0.724 - - - - - - - 0.724 - - proteasome 26S subunit, non-ATPase 2 [Source:NCBI gene;Acc:425294]
97. ENSGALG00000001398 ENSGALG00000001398 3248 0.723 - - - - - - - 0.723 - -
98. SF3B4 ENSGALG00000013352 2054 0.723 - - - - - - - 0.723 - - splicing factor 3b subunit 4 [Source:HGNC Symbol;Acc:HGNC:10771]
99. SETDB2 ENSGALG00000017006 1353 0.723 - - - - - - - 0.723 - - SET domain bifurcated 2 [Source:HGNC Symbol;Acc:HGNC:20263]
100. UBE2E1 ENSGALG00000011286 5483 0.723 - - - - - - - 0.723 - - ubiquitin conjugating enzyme E2 E1 [Source:HGNC Symbol;Acc:HGNC:12477]

There are 87 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA