Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HOMER3

Gene Name Gene ID Reads Annotation
HOMER3 ENSGALG00000003058, ENSGALG00000003074 1571 homer scaffolding protein 3, transcript variant X4











Genes with expression patterns similar to HOMER3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HOMER3 ENSGALG00000003058, ENSGALG00000003074 1571 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 homer scaffolding protein 3, transcript variant X4
2. RTDR1 RTDR1 104 1.553 - - 0.702 - 0.851 - - - - -
3. FOXRED2 ENSGALG00000012530 36 1 - - - - - 1.000 - - - - FAD dependent oxidoreductase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26264]
4. TFF2 ENSGALG00000016165 1 1 - - - - - 1.000 - - - - trefoil factor 2 [Source:HGNC Symbol;Acc:HGNC:11756]
5. LRRC8A ENSGALG00000004573 2 1 - - - - - 1.000 - - - - leucine rich repeat containing 8 VRAC subunit A [Source:HGNC Symbol;Acc:HGNC:19027]
6. PLA2G6 ENSGALG00000012281 2 1 - - - - - 1.000 - - - - phospholipase A2 group VI [Source:NCBI gene;Acc:418028]
7. BSND ENSGALG00000043998 11 1 - - - - - 1.000 - - - - barttin CLCNK type accessory beta subunit [Source:HGNC Symbol;Acc:HGNC:16512]
8. RNP ENSGALG00000028991 10 1 - - - - - 1.000 - - - - renal natriuretic peptide [Source:NCBI gene;Acc:100526659]
9. PKHD1 ENSGALG00000042136 8 1 - - - - - 1.000 - - - - PKHD1, fibrocystin/polyductin [Source:HGNC Symbol;Acc:HGNC:9016]
10. ENSGALG00000026365 ENSGALG00000026365 1 1 - - - - - 1.000 - - - -
11. ENSGALG00000027467 ENSGALG00000027467 1 1 - - - - - 1.000 - - - -
12. ALPL ENSGALG00000023542 6 1 - - - - - 1.000 - - - - alkaline phosphatase, liver/bone/kidney [Source:NCBI gene;Acc:396317]
13. ENSGALG00000009777 ENSGALG00000009777 3 1 - - - - - 1.000 - - - -
14. HPRTL ENSGALG00000005361 31 1 - - - - - 1.000 - - - - hypoxanthine-guanine phosphoribosyltransferase-like, transcript variant X1
15. PPP1R3E ENSGALG00000003492, ENSGALG00000041047 376 1 - - - - - 1.000 - - - - protein phosphatase 1 regulatory subunit 3E [Source:HGNC Symbol;Acc:HGNC:14943]
16. HINT2 ENSGALG00000027418 10 1 - - - - - 1.000 - - - - histidine triad nucleotide binding protein 2 [Source:HGNC Symbol;Acc:HGNC:18344]
17. ITPRIP ENSGALG00000025780 4 1 - - - - - - - - - 1.000 inositol 1,4,5-trisphosphate receptor interacting protein [Source:HGNC Symbol;Acc:HGNC:29370]
18. MYH13 4 1 - - - - - 1.000 - - - - myosin, heavy chain 13, skeletal muscle
19. NANOG ENSGALG00000027772 89 1 - - - - - 1.000 - - - - Nanog homeobox [Source:NCBI gene;Acc:100272166]
20. TLR7 ENSGALG00000016590 6 1 - - - - - 1.000 - - - - toll like receptor 7 [Source:NCBI gene;Acc:418638]
21. KBTBD11 ENSGALG00000022887 168 1 - - - - - 1.000 - - - - kelch repeat and BTB domain containing 11 [Source:HGNC Symbol;Acc:HGNC:29104]
22. SRMS ENSGALG00000005852 174 1 - - - - - 1.000 - - - - src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites [Source:HGNC Symbol;Acc:HGNC:11298]
23. FNDC7 ENSGALG00000001983 24 1 - - - - - 1.000 - - - - fibronectin type III domain containing 7 [Source:HGNC Symbol;Acc:HGNC:26668]
24. SOHYE2L ENSGALG00000007118 1 1 - - - - - 1.000 - - - - sodium/hydrogen exchanger 2-like
25. ANO3 ENSGALG00000013311 16 1 - - - - - 1.000 - - - - anoctamin 3 [Source:NCBI gene;Acc:422968]
26. IKBKE ENSGALG00000013356 1 1 - - - - - 1.000 - - - - inhibitor of nuclear factor kappa B kinase subunit epsilon [Source:HGNC Symbol;Acc:HGNC:14552]
27. TANC2 26 1 - - - - - 1.000 - - - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, transcript variant X14
28. FAM73B FAM73B 2 1 - - - - - 1.000 - - - -
29. GZMM ENSGALG00000015192 8 1 - - - - - 1.000 - - - - granzyme M
30. SYPL1 ENSGALG00000029006 126 1 - - - - - 1.000 - - - - synaptophysin like 1 [Source:NCBI gene;Acc:417708]
31. MAL ENSGALG00000008552 4 1 - - - - - 1.000 - - - - mal, T cell differentiation protein [Source:NCBI gene;Acc:416707]
32. FAM43B ENSGALG00000026367 2 1 - - - - - 1.000 - - - - family with sequence similarity 43 member B [Source:HGNC Symbol;Acc:HGNC:31791]
33. HSD11B1L ENSGALG00000012860 4 1 - - - - - 1.000 - - - - hydroxysteroid 11-beta dehydrogenase 1 like [Source:NCBI gene;Acc:408034]
34. ABI3 ENSGALG00000044071 2 1 - - - - - - - - - 1.000 ABI family member 3 [Source:HGNC Symbol;Acc:HGNC:29859]
35. SLC4A5 ENSGALG00000032146 3 1 - - - - - 1.000 - - - - solute carrier family 4 member 5 [Source:HGNC Symbol;Acc:HGNC:18168]
36. ENSGALG00000023424 ENSGALG00000023424 1 1 - - - - - 1.000 - - - -
37. IL10R2 IL10R2 72 1 - - - - - 1.000 - - - -
38. COL7A1 6 0.992 - - - - - 0.992 - - - - collagen, type VII, alpha 1, transcript variant X7
39. CPN2 ENSGALG00000045776 18 0.986 - - - - - 0.986 - - - - carboxypeptidase N subunit 2
40. EPB42 ENSGALG00000021230 20 0.97 - - - - - 0.970 - - - - Gallus gallus erythrocyte membrane protein band 4.2 (EPB42), mRNA. [Source:RefSeq mRNA;Acc:NM_001321559]
41. OTOG ENSGALG00000006208 17 0.957 - - - - - 0.957 - - - - otogelin [Source:HGNC Symbol;Acc:HGNC:8516]
42. ENSGALG00000013985 ENSGALG00000013985 11 0.946 - - - - - - - - - 0.946
43. ENSGALG00000005097 ENSGALG00000005097 85 0.94 - - - - - 0.940 - - - -
44. C1QTNF9 ENSGALG00000017117 7 0.939 - - - - - 0.939 - - - - C1q and tumor necrosis factor related protein 9, transcript variant X2
45. PYROXD2 ENSGALG00000007014 14 0.937 - - - - - 0.937 - - - - pyridine nucleotide-disulphide oxidoreductase domain 2 [Source:HGNC Symbol;Acc:HGNC:23517]
46. ENSGALG00000004703 ENSGALG00000004703 112 0.931 - - - - - 0.931 - - - -
47. NPPA ENSGALG00000004574 226 0.925 - - - - - 0.925 - - - - natriuretic peptide A [Source:NCBI gene;Acc:395765]
48. PIGZ ENSGALG00000026294 99 0.918 - - - - - 0.918 - - - - phosphatidylinositol glycan anchor biosynthesis class Z, transcript variant X2
49. ENSGALG00000021344 ENSGALG00000021344 50 0.914 - - - - - - - 0.914 - -
50. ZFP64 ENSGALG00000038858 177 0.912 - - - - - - - - - 0.912 ZFP64 zinc finger protein [Source:NCBI gene;Acc:419342]
51. PNKD ENSGALG00000022166 595 0.912 - - - - - - - 0.912 - - PNKD, MBL domain containing [Source:HGNC Symbol;Acc:HGNC:9153]
52. LOC415324 ENSGALG00000002097 17 0.907 - - - - - - - 0.907 - - epididymal protein-like, transcript variant X16
53. ENSGALG00000013318 ENSGALG00000013318 8 0.907 - - - - - - - 0.907 - -
54. MCAM ENSGALG00000030027 26 0.905 - - - - 0.905 - - - - - melanoma cell adhesion molecule [Source:NCBI gene;Acc:448832]
55. CYR61 ENSGALG00000008661 43 0.9 - - - - 0.900 - - - - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
56. TDRD12 ENSGALG00000004704 19 0.896 - - - - 0.896 - - - - - tudor domain containing 12, transcript variant X3
57. GRB10 ENSGALG00000013100 37 0.895 - - - - - 0.895 - - - - growth factor receptor bound protein 10 [Source:NCBI gene;Acc:420948]
58. GRIN1 ENSGALG00000008898 18 0.894 - - - - 0.894 - - - - - glutamate ionotropic receptor NMDA type subunit 1 [Source:NCBI gene;Acc:404296]
59. TCF4 TCF4 29 0.894 - - - - - 0.894 - - - -
60. IRG1 IRG1 21 0.893 - - - - 0.893 - - - - -
61. C10orf67 15 0.893 - - - - 0.893 - - - - - chromosome 10 open reading frame 67, transcript variant X2
62. ADAM33 ENSGALG00000030602 7 0.892 - - - - - 0.892 - - - - ADAM metallopeptidase domain 33 [Source:NCBI gene;Acc:422948]
63. DMGDH ENSGALG00000004491 15 0.892 - - - - - 0.892 - - - - dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
64. SH3D19 ENSGALG00000010081 52 0.892 - - - - - 0.892 - - - - SH3 domain containing 19 [Source:HGNC Symbol;Acc:HGNC:30418]
65. CRTAM ENSGALG00000006527 6 0.892 - - - - - 0.892 - - - - cytotoxic and regulatory T cell molecule [Source:NCBI gene;Acc:395342]
66. TJP3 ENSGALG00000000748 45 0.891 - - - - 0.891 - - - - - tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
67. DMRTB1 ENSGALG00000029023 35 0.887 - - 0.887 - - - - - - - DMRT like family B with proline rich C-terminal 1 [Source:NCBI gene;Acc:429107]
68. TMCC1 ENSGALG00000008487 65 0.884 - - - - 0.884 - - - - - transmembrane and coiled-coil domain family 1 [Source:HGNC Symbol;Acc:HGNC:29116]
69. SIN3B ENSGALG00000003771 60 0.881 - - - - - 0.881 - - - - SIN3 transcription regulator family member B [Source:HGNC Symbol;Acc:HGNC:19354]
70. ENSGALG00000025953 ENSGALG00000025953 65 0.881 - - - - 0.881 - - - - -
71. PHC2 62 0.881 - - - - 0.881 - - - - - polyhomeotic homolog 2
72. STS ENSGALG00000016622 11 0.878 - - 0.878 - - - - - - - steroid sulfatase [Source:HGNC Symbol;Acc:HGNC:11425]
73. FRK ENSGALG00000014979 65 0.876 - - - - - 0.876 - - - - fyn related Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3955]
74. WASF3 ENSGALG00000017103 50 0.873 - - - - - 0.873 - - - - WAS protein family member 3 [Source:HGNC Symbol;Acc:HGNC:12734]
75. LMTK2 ENSGALG00000003479 46 0.872 - - - - 0.872 - - - - - lemur tyrosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:17880]
76. GRIN3B ENSGALG00000026241 177 0.871 - - - - - 0.871 - - - - glutamate ionotropic receptor NMDA type subunit 3B [Source:HGNC Symbol;Acc:HGNC:16768]
77. CCDC39 ENSGALG00000021855 23 0.871 - - - - 0.871 - - - - - coiled-coil domain containing 39
78. SDCCAG3 1208 0.87 - - - - 0.870 - - - - - serologically defined colon cancer antigen 3
79. ERN2 ENSGALG00000027592 186 0.869 - - - - 0.869 - - - - - endoplasmic reticulum to nucleus signaling 2 [Source:NCBI gene;Acc:771230]
80. FAM208B 24 0.865 - - - - 0.865 - - - - - family with sequence similarity 208 member B, transcript variant X3
81. SYT10 ENSGALG00000012911 17 0.864 - - - - 0.864 - - - - - synaptotagmin 10 [Source:HGNC Symbol;Acc:HGNC:19266]
82. LIN7A ENSGALG00000010939 8 0.857 - - - - - 0.857 - - - - lin-7 homolog A, crumbs cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:17787]
83. MBTD1 ENSGALG00000002954 254 0.856 - - - - - - - 0.856 - - mbt domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19866]
84. LRP1B ENSGALG00000012407 125 0.853 - - - - 0.853 - - - - - LDL receptor related protein 1B [Source:HGNC Symbol;Acc:HGNC:6693]
85. LARP4B ENSGALG00000006672 57 0.849 - - - - 0.849 - - - - - La ribonucleoprotein domain family member 4B [Source:HGNC Symbol;Acc:HGNC:28987]
86. NFXL1 ENSGALG00000014138 36 0.849 - - - - - 0.849 - - - - nuclear transcription factor, X-box binding like 1 [Source:HGNC Symbol;Acc:HGNC:18726]
87. CCDC180 109 0.847 - - - - 0.847 - - - - - coiled-coil domain containing 180
88. TMEM164 ENSGALG00000008076 734 0.847 - - - - 0.847 - - - - - transmembrane protein 164 [Source:NCBI gene;Acc:422344]
89. HMHA1 HMHA1 929 0.846 - - - - - 0.846 - - - -
90. SDR42E1 ENSGALG00000005456 586 0.845 - - - - 0.845 - - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:HGNC Symbol;Acc:HGNC:29834]
91. PRRG4 ENSGALG00000012032 96 0.845 - - - - 0.845 - - - - - proline rich and Gla domain 4 [Source:NCBI gene;Acc:421600]
92. MAP2K1 ENSGALG00000007687 250 0.841 - - 0.841 - - - - - - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
93. SIRT5 ENSGALG00000012692 3196 0.841 - - - - 0.841 - - - - - sirtuin 5 [Source:NCBI gene;Acc:420834]
94. ENSGALG00000024018 ENSGALG00000024018 37 0.841 - - - - 0.841 - - - - -
95. MARVELD3 ENSGALG00000012886 155 0.841 - - - - 0.841 - - - - - MARVEL domain containing 3
96. NEFL ENSGALG00000000314 4883 0.839 - - - - - - - 0.839 - - neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
97. SLCO2A1 ENSGALG00000006471 18 0.838 - - 0.838 - - - - - - - solute carrier organic anion transporter family member 2A1 [Source:NCBI gene;Acc:424862]
98. MAP3K21 ENSGALG00000011008 54 0.837 - - - - 0.837 - - - - - mitogen-activated protein kinase kinase kinase 21 [Source:HGNC Symbol;Acc:HGNC:29798]
99. GUF1 ENSGALG00000014217 211 0.834 - - - - 0.834 - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
100. AANAT ENSGALG00000001955 23 0.83 - - - - 0.830 - - - - - aralkylamine N-acetyltransferase [Source:NCBI gene;Acc:396066]

There are 189 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA