Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HNRNPU

Gene Name Gene ID Reads Annotation
HNRNPU ENSGALG00000010671 56560 heterogeneous nuclear ribonucleoprotein U [Source:HGNC Symbol;Acc:HGNC:5048]











Genes with expression patterns similar to HNRNPU

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HNRNPU ENSGALG00000010671 56560 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 heterogeneous nuclear ribonucleoprotein U [Source:HGNC Symbol;Acc:HGNC:5048]
2. WLS ENSGALG00000011238 20969 1.616 - - - - 0.706 - 0.910 - - - wntless Wnt ligand secretion mediator [Source:NCBI gene;Acc:424707]
3. GDPD4 ENSGALG00000000690 824 1.474 - - 0.715 - - - 0.759 - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
4. UBE2N ENSGALG00000030515 32059 0.966 - - - - - - 0.966 - - - ubiquitin conjugating enzyme E2 N [Source:NCBI gene;Acc:417898]
5. ARGLU1 ENSGALG00000016855 25633 0.937 - - - - - - 0.937 - - - arginine and glutamate rich 1 [Source:NCBI gene;Acc:418765]
6. PRDX1 ENSGALG00000010243 151918 0.935 - - - - - - 0.935 - - - peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
7. ST13 ENSGALG00000012007 25670 0.932 - - - - - - 0.932 - - - ST13, Hsp70 interacting protein [Source:NCBI gene;Acc:418003]
8. RPS25 ENSGALG00000007699 156127 0.928 - - - - - - 0.928 - - - ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
9. CKAP4 ENSGALG00000012659 36398 0.927 - - - - - - 0.927 - - - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
10. TRA2A ENSGALG00000010973 37101 0.924 - - - - - - 0.924 - - - transformer 2 alpha homolog [Source:NCBI gene;Acc:420618]
11. BRIX1 ENSGALG00000003373 27878 0.922 - - - - - - 0.922 - - - BRX1, biogenesis of ribosomes [Source:NCBI gene;Acc:427433]
12. CCT5 ENSGALG00000013041 56190 0.912 - - - - - - 0.912 - - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
13. HDLBP ENSGALG00000005823 24636 0.911 - - - - - - 0.911 - - - high density lipoprotein binding protein [Source:NCBI gene;Acc:395984]
14. BUB3 ENSGALG00000009681 36055 0.899 - - - - - - 0.899 - - - BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
15. ENSGALG00000000360 ENSGALG00000000360 15320 0.897 - - - - - - 0.897 - - -
16. PELI1 ENSGALG00000008837 11561 0.892 - - - - - - 0.892 - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
17. TPI1 ENSGALG00000014526 43273 0.891 - - - - - - 0.891 - - - triosephosphate isomerase 1 [Source:NCBI gene;Acc:396435]
18. TBL1X ENSGALG00000040006 28597 0.89 - - - - - - 0.890 - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
19. SNRPB2 28675 0.889 - - - - - - 0.889 - - - small nuclear ribonucleoprotein polypeptide B2
20. ENSGALG00000013825 ENSGALG00000013825 16473 0.881 - - - - - - 0.881 - - -
21. MRPS26 ENSGALG00000014118 27422 0.88 - - - - - - 0.880 - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
22. ZDHHC6 ENSGALG00000008870 16575 0.879 - - - - - - 0.879 - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
23. SEC61G ENSGALG00000037863 83362 0.872 - - - - - - 0.872 - - - Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
24. NDUFA11 ENSGALG00000021692 75804 0.871 - - - - - - 0.871 - - - NADH:ubiquinone oxidoreductase subunit A11
25. RPF1 ENSGALG00000008796 9809 0.864 - - - - - - 0.864 - - - ribosome production factor 1 homolog
26. EZH2 ENSGALG00000043399 15881 0.855 - - - - - - 0.855 - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]
27. MOB4 ENSGALG00000008128 10322 0.854 - - - - - - 0.854 - - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
28. ACTR6 ENSGALG00000040976 31271 0.854 - - - - - - 0.854 - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
29. CDC5L ENSGALG00000016704 22893 0.853 - - - - - - 0.853 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
30. ABRACL ENSGALG00000013826 19445 0.849 - - - - - - 0.849 - - - ABRA C-terminal like [Source:NCBI gene;Acc:770205]
31. CNBP 42704 0.848 - - - - - - 0.848 - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
32. MRPS15 ENSGALG00000044433 15356 0.846 - - - - - - 0.846 - - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
33. MRPS36 ENSGALG00000014789 7584 0.841 - - - - - - 0.841 - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
34. PPP3CB ENSGALG00000005243 8794 0.838 - - - - - - 0.838 - - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
35. RNF13 ENSGALG00000010411 8749 0.838 - - - - - - 0.838 - - - ring finger protein 13 [Source:NCBI gene;Acc:396303]
36. EXOSC7 ENSGALG00000030084 8654 0.836 - - - - - - 0.836 - - - exosome component 7 [Source:NCBI gene;Acc:420704]
37. BTF3 ENSGALG00000013512 33962 0.831 - - - - - - 0.831 - - - basic transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:1125]
38. RPL29 ENSGALG00000026978 271790 0.831 - - - - - - 0.831 - - - ribosomal protein L29 [Source:NCBI gene;Acc:770249]
39. ANLN 10479 0.827 - - - - - - 0.827 - - - anillin actin binding protein, transcript variant X2
40. CHPKCI CHPKCI 36217 0.824 - - - - - - 0.824 - - -
41. MRPS34 ENSGALG00000001792 14262 0.823 - - - - - - 0.823 - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
42. TRIB2 ENSGALG00000016457 17641 0.822 - - - - - - 0.822 - - - tribbles pseudokinase 2 [Source:NCBI gene;Acc:378919]
43. SERBP1 ENSGALG00000011229 30489 0.821 - - - - - - 0.821 - - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
44. MYBL2 ENSGALG00000003503 15875 0.819 - - - - - - 0.819 - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
45. NOB1 ENSGALG00000000693 15442 0.818 - - - - - - 0.818 - - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]
46. COMMD8 ENSGALG00000026279 13509 0.817 - - - - - - 0.817 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
47. PSMD13 ENSGALG00000043684 14720 0.816 - - - - - - 0.816 - - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
48. MCTS1 ENSGALG00000008517 27514 0.815 - - - - 0.815 - - - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
49. USO1 ENSGALG00000010878 9506 0.814 - - - - - - 0.814 - - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
50. CCAR1 ENSGALG00000004108 13219 0.814 - - - - - - 0.814 - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
51. POLB ENSGALG00000040828 7462 0.813 - - - - - - 0.813 - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
52. CTNNBL1 ENSGALG00000006817 6765 0.812 - - - - - - 0.812 - - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
53. EPHA3 ENSGALG00000015403 9811 0.809 - - - - - - 0.809 - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
54. FHL3 ENSGALG00000035187 9753 0.808 - - - - - - 0.808 - - - four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]
55. POLR2C ENSGALG00000001168 10703 0.806 - - - - - - 0.806 - - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
56. FGD5 ENSGALG00000008546 4031 0.805 - - - - - - 0.805 - - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
57. SLC9A3R2 ENSGALG00000005608 4220 0.802 - - 0.802 - - - - - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
58. DHFR ENSGALG00000026757 18478 0.802 - - 0.802 - - - - - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
59. LOC424109 ENSGALG00000008738 3932 0.801 - - - - - - 0.801 - - - alpha-aspartyl dipeptidase
60. APITD1 APITD1 11830 0.8 - - - - - - 0.800 - - -
61. GALNTL4 GALNTL4 3548 0.8 - - - - - - 0.800 - - -
62. TTF1 4214 0.798 - - - - - - 0.798 - - - transcription termination factor 1
63. SPINT1 ENSGALG00000008469 5735 0.796 - - - - - - 0.796 - - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
64. GCAT ENSGALG00000012312 7906 0.796 - - - - - - 0.796 - - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
65. RAD18 ENSGALG00000008368 7214 0.794 - - 0.794 - - - - - - - RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
66. GLT8D1 ENSGALG00000001642 4232 0.794 - - - - - - 0.794 - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
67. DDX18 ENSGALG00000012147 12463 0.793 - - - - - - 0.793 - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
68. CCDC90B ENSGALG00000037072 5088 0.793 - - - - - - 0.793 - - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
69. ADIPOR2 ENSGALG00000035533 6523 0.791 - - 0.791 - - - - - - - adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
70. MMADHC ENSGALG00000012473 9026 0.79 - - - - - - 0.790 - - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
71. C6H10ORF32 C6H10ORF32 7694 0.79 - - - - - - 0.790 - - -
72. gga-mir-1723 ENSGALG00000025386 6662 0.788 - - - - - - 0.788 - - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
73. DIS3 ENSGALG00000016930 3696 0.788 - - - - - - 0.788 - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
74. MED1 ENSGALG00000001708 9556 0.786 - - - - - - 0.786 - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
75. HDHD2 ENSGALG00000034801 6373 0.786 - - 0.786 - - - - - - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
76. PRKG1 ENSGALG00000003805 4654 0.785 - - - - - - 0.785 - - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
77. ENSGALG00000006730 ENSGALG00000006730 3695 0.781 - - - - - - 0.781 - - -
78. SHMT1 ENSGALG00000005046 1430 0.775 - - 0.775 - - - - - - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
79. COX6A1 ENSGALG00000007205 72629 0.773 - - - - 0.773 - - - - - cytochrome c oxidase subunit 6A1 [Source:NCBI gene;Acc:416978]
80. FAT1 ENSGALG00000013579 6030 0.773 - - 0.773 - - - - - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
81. TP53INP1 ENSGALG00000041353 6890 0.772 - - - - - - 0.772 - - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
82. ZNF276 ENSGALG00000000513 2410 0.771 - - - - - - 0.771 - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
83. IPO7 ENSGALG00000005807 46316 0.77 - - 0.770 - - - - - - - importin 7 [Source:HGNC Symbol;Acc:HGNC:9852]
84. VDAC3 ENSGALG00000041463 21595 0.77 - - - - - - 0.770 - - - voltage dependent anion channel 3, transcript variant X9
85. STAG2 ENSGALG00000008482 13629 0.77 - - - - - - 0.770 - - - stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
86. ATPAF2 ENSGALG00000004926 3393 0.77 - - - - - - 0.770 - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802]
87. SH3RF3 ENSGALG00000016810 2169 0.769 - - - - - - 0.769 - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
88. LOC425795 ENSGALG00000027696 2357 0.768 - - - - - - 0.768 - - - ectoderm-neural cortex protein 1-like, transcript variant X1
89. ENSGALG00000028938 ENSGALG00000028938 18616 0.768 - - - - 0.768 - - - - -
90. CHL1 ENSGALG00000037856 1565 0.768 - - - - - - 0.768 - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
91. SNAPIN ENSGALG00000026796 11155 0.767 - - - - - - 0.767 - - - SNAP associated protein [Source:HGNC Symbol;Acc:HGNC:17145]
92. CRAC1A CRAC1A 5265 0.766 - - - - - - 0.766 - - -
93. MAN2B2 ENSGALG00000015537 2267 0.766 - - 0.766 - - - - - - - mannosidase alpha class 2B member 2 [Source:HGNC Symbol;Acc:HGNC:29623]
94. SAAL1 ENSGALG00000026111 8340 0.766 - - - - 0.766 - - - - - serum amyloid A like 1
95. SENP6 ENSGALG00000015901 8013 0.766 - - 0.766 - - - - - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
96. LOC407092 ENSGALG00000013809 10706 0.765 - - - - - - 0.765 - - - AD012Z, transcript variant X5
97. SAV1 ENSGALG00000012341 3313 0.764 - - - - - - 0.764 - - - salvador family WW domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:17795]
98. RPUSD4 ENSGALG00000024326 3788 0.764 - - - - - - 0.764 - - - RNA pseudouridylate synthase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25898]
99. ENSGALG00000022570 ENSGALG00000022570 90374 0.764 - - - - - 0.764 - - - -
100. DNAJC10 ENSGALG00000008862 3114 0.764 - - - - - - 0.764 - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:HGNC Symbol;Acc:HGNC:24637]

There are 92 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA