Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for HN1

Gene Name Gene ID Reads Annotation
HN1 HN1 34386











Genes with expression patterns similar to HN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HN1 HN1 34386 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. RBMX ENSGALG00000006457 34009 1.661 - - - - 0.760 - 0.901 - - - RNA binding motif protein X-linked [Source:NCBI gene;Acc:422248]
3. NUPL1 NUPL1 8197 1.54 - - 0.758 - - - - 0.782 - -
4. COG7 ENSGALG00000006156 4072 1.512 - - 0.732 - - - - 0.780 - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
5. TMEM167A ENSGALG00000027332 13862 1.498 - - 0.756 - - - 0.742 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
6. SMC4 ENSGALG00000009553 15715 1.495 - - 0.761 - - - 0.734 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
7. NDUFC2 ENSGALG00000029172 26136 1.476 - - 0.755 - - - 0.721 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
8. DHFR ENSGALG00000026757 18478 1.472 - - 0.771 - - - - 0.701 - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
9. FAM98A ENSGALG00000010428 9585 1.448 - - 0.744 - - - 0.704 - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
10. LLPH ENSGALG00000019358 20976 1.437 - - - - 0.715 - 0.722 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
11. PEBP1 ENSGALG00000007403 77502 0.931 - - - - - - 0.931 - - - phosphatidylethanolamine binding protein 1 [Source:NCBI gene;Acc:416990]
12. CIB1 ENSGALG00000008302 13946 0.931 - - - - - - - 0.931 - - calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
13. PSMB3 ENSGALG00000001597 22588 0.923 - - - - - - 0.923 - - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
14. STK4 ENSGALG00000004098 11366 0.908 - - - - - - 0.908 - - - serine/threonine kinase 4 [Source:NCBI gene;Acc:419187]
15. CNOT7 ENSGALG00000013649 23435 0.887 - - - - - - 0.887 - - - CCR4-NOT transcription complex subunit 7 [Source:NCBI gene;Acc:422733]
16. UBR7 ENSGALG00000010842 16488 0.877 - - - - - - 0.877 - - - Gallus gallus ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318461]
17. STX2 ENSGALG00000002536 10438 0.877 - - - - - - 0.877 - - - syntaxin 2 [Source:NCBI gene;Acc:378895]
18. RPS3A ENSGALG00000010077 292185 0.875 - - - - - - 0.875 - - - ribosomal protein S3A [Source:NCBI gene;Acc:422477]
19. PRPF8 ENSGALG00000002943 31189 0.872 - - - - - - 0.872 - - - pre-mRNA processing factor 8 [Source:HGNC Symbol;Acc:HGNC:17340]
20. TRIT1 ENSGALG00000003851 1518 0.861 - - 0.861 - - - - - - - tRNA isopentenyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:20286]
21. UBR5 ENSGALG00000031282 12143 0.86 - - - - - - - 0.860 - - ubiquitin protein ligase E3 component n-recognin 5 [Source:HGNC Symbol;Acc:HGNC:16806]
22. GABPA ENSGALG00000015763 11567 0.857 - - - - - - 0.857 - - - GA binding protein transcription factor subunit alpha [Source:NCBI gene;Acc:418478]
23. RPL12 ENSGALG00000008806 229862 0.856 - - - - - - 0.856 - - - ribosomal protein L12 [Source:NCBI gene;Acc:417264]
24. PSMC2 ENSGALG00000008236 25980 0.855 - - - - - - 0.855 - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
25. NDUFS6 ENSGALG00000013191 15874 0.853 - - - - - - 0.853 - - - NADH:ubiquinone oxidoreductase subunit S6 [Source:HGNC Symbol;Acc:HGNC:7713]
26. RPL36AL ENSGALG00000004952 205590 0.852 - - - - - - 0.852 - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
27. PSMA6 ENSGALG00000010060 26517 0.849 - - - - - - 0.849 - - - proteasome subunit alpha 6 [Source:NCBI gene;Acc:423326]
28. PRMT3 ENSGALG00000003958 14160 0.848 - - - - - - 0.848 - - - protein arginine methyltransferase 3 [Source:NCBI gene;Acc:422975]
29. APTX ENSGALG00000001954 692 0.847 - - 0.847 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
30. TALDO1 ENSGALG00000037195 30673 0.844 - - - - - - 0.844 - - - transaldolase 1 [Source:NCBI gene;Acc:423019]
31. TTPAL ENSGALG00000004244 2734 0.843 - - 0.843 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
32. PRTG ENSGALG00000037336 34665 0.841 - - 0.841 - - - - - - - protogenin [Source:NCBI gene;Acc:415407]
33. DAK DAK 13208 0.839 - - 0.839 - - - - - - -
34. COX7C ENSGALG00000027963 84312 0.831 - - - - - - 0.831 - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
35. GFER ENSGALG00000005579 1367 0.831 - - 0.831 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
36. SOBP ENSGALG00000043047 147 0.83 - - 0.830 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
37. RCC2 ENSGALG00000031684 28067 0.83 - - - - - - 0.830 - - - regulator of chromosome condensation 2 [Source:HGNC Symbol;Acc:HGNC:30297]
38. CHGA ENSGALG00000010820 1028 0.83 - - 0.830 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
39. PEMT ENSGALG00000004875 4094 0.829 - - 0.829 - - - - - - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
40. ENSGALG00000007509 ENSGALG00000007509 18441 0.828 - - - - - - 0.828 - - -
41. TCP1 ENSGALG00000011637 73216 0.827 - - - - - - 0.827 - - - t-complex 1 [Source:NCBI gene;Acc:421586]
42. CUL5 ENSGALG00000017165 2480 0.827 - - 0.827 - - - - - - - cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
43. NDUFB10 ENSGALG00000005465 41984 0.827 - - - - - - 0.827 - - - NADH:ubiquinone oxidoreductase subunit B10 [Source:HGNC Symbol;Acc:HGNC:7696]
44. PTBP1 ENSGALG00000001962 66983 0.825 - - - - - - 0.825 - - - polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:420098]
45. TCTN2 ENSGALG00000023683 3596 0.825 - - 0.825 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
46. LRRC71 ENSGALG00000027351 695 0.825 - - 0.825 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
47. LAP3 ENSGALG00000006334 21076 0.824 - - - - - - 0.824 - - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
48. GDPD4 ENSGALG00000000690 824 0.822 - - 0.822 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
49. AASDHPPT ENSGALG00000027981 1017 0.822 - - 0.822 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
50. SHMT1 ENSGALG00000005046 1430 0.822 - - 0.822 - - - - - - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
51. ATP6V1E1 ENSGALG00000013036 13497 0.822 - - 0.822 - - - - - - - ATPase H+ transporting V1 subunit E1 [Source:NCBI gene;Acc:418162]
52. NACAD 679 0.821 - - 0.821 - - - - - - - NAC alpha domain containing, transcript variant X1
53. RFK ENSGALG00000033558 1364 0.82 - - 0.820 - - - - - - - riboflavin kinase, transcript variant X3
54. ADK ENSGALG00000005057 199 0.82 - - 0.820 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
55. NGF ENSGALG00000002556 122 0.819 - - 0.819 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
56. IFT81 ENSGALG00000003854 2534 0.819 - - 0.819 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
57. UEVLD ENSGALG00000006342 164 0.819 - - 0.819 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
58. OSGIN2 ENSGALG00000042840 83 0.818 - - 0.818 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
59. LPCAT3 ENSGALG00000014570 7919 0.818 - - 0.818 - - - - - - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
60. CEP104 ENSGALG00000000978 1130 0.818 - - 0.818 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
61. ENSGALG00000028964 ENSGALG00000028964 46 0.817 - - 0.817 - - - - - - -
62. PRUNE PRUNE 452 0.817 - - 0.817 - - - - - - -
63. ITM2B ENSGALG00000016996 1112 0.816 - - 0.816 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
64. ITGB4 ENSGALG00000002389 44 0.816 - - 0.816 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
65. SLC37A3 ENSGALG00000012849 836 0.816 - - 0.816 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
66. CDC14B ENSGALG00000012627 110 0.816 - - 0.816 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
67. ENSGALG00000004703 ENSGALG00000004703 112 0.816 - - 0.816 - - - - - - -
68. DBN1 ENSGALG00000033405 216 0.816 - - 0.816 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
69. MRC2 ENSGALG00000000461 48 0.816 - - 0.816 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
70. CHAMP1 ENSGALG00000016813 508 0.816 - - 0.816 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
71. PCYT1B 190 0.816 - - 0.816 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
72. TDRD6 48 0.816 - - 0.816 - - - - - - - tudor domain containing 6
73. SZT2 ENSGALG00000028561 255 0.816 - - 0.816 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
74. MED12 ENSGALG00000036322 814 0.815 - - 0.815 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
75. ENSGALG00000020103 ENSGALG00000020103 64 0.814 - - 0.814 - - - - - - -
76. RAD54L2 ENSGALG00000003243 187 0.814 - - 0.814 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
77. NXPE3 ENSGALG00000015344 111 0.814 - - 0.814 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
78. AKAP10 ENSGALG00000004679 103 0.814 - - 0.814 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
79. RQCD1 RQCD1 110 0.814 - - 0.814 - - - - - - -
80. ACO2 ENSGALG00000011950 30387 0.814 - - - - - - 0.814 - - - aconitase 2 [Source:NCBI gene;Acc:374009]
81. L3MBTL3 ENSGALG00000034030 113 0.813 - - 0.813 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
82. WDR92 ENSGALG00000008760 3934 0.813 - - 0.813 - - - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
83. MINOS1 ENSGALG00000004039 37740 0.813 - - - - - - 0.813 - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
84. ENSGALG00000002020 ENSGALG00000002020 183 0.813 - - 0.813 - - - - - - -
85. CTNS ENSGALG00000004628 1358 0.812 - - 0.812 - - - - - - - cystinosin, lysosomal cystine transporter [Source:HGNC Symbol;Acc:HGNC:2518]
86. COQ3 ENSGALG00000015486 3508 0.812 - - 0.812 - - - - - - - coenzyme Q3, methyltransferase [Source:HGNC Symbol;Acc:HGNC:18175]
87. IQCD ENSGALG00000037307 642 0.811 - - 0.811 - - - - - - - IQ motif containing D, transcript variant X2
88. PTDSS2 ENSGALG00000004300 682 0.811 - - 0.811 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
89. RPS6KB1 ENSGALG00000005198 169 0.811 - - 0.811 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
90. FAM134C 860 0.811 - - 0.811 - - - - - - - family with sequence similarity 134 member C
91. FBXL5 ENSGALG00000014510 245 0.811 - - 0.811 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
92. HMGN1 ENSGALG00000016067 17375 0.811 - - 0.811 - - - - - - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
93. IFT57 ENSGALG00000015356 5540 0.81 - - 0.810 - - - - - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
94. TRIM13 ENSGALG00000017011 92 0.81 - - 0.810 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
95. COPS4 ENSGALG00000011130 21515 0.81 - - - - - - 0.810 - - - COP9 signalosome subunit 4 [Source:NCBI gene;Acc:422594]
96. SLC3A1 ENSGALG00000009973 608 0.809 - - 0.809 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
97. U4 U4 69 0.809 - - 0.809 - - - - - - -
98. PSMB1 ENSGALG00000011174 40689 0.809 - - - - - - 0.809 - - - proteasome subunit beta 1 [Source:NCBI gene;Acc:421551]
99. MLLT3 ENSGALG00000015078 502 0.809 - - 0.809 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
100. DCP1B 1306 0.809 - - 0.809 - - - - - - - decapping mRNA 1B

There are 352 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA