Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HMGXB4

Gene Name Gene ID Reads Annotation
HMGXB4 ENSGALG00000044768 6005 HMG-box containing 4 [Source:HGNC Symbol;Acc:HGNC:5003]











Genes with expression patterns similar to HMGXB4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HMGXB4 ENSGALG00000044768 6005 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 HMG-box containing 4 [Source:HGNC Symbol;Acc:HGNC:5003]
2. SIPA1L1 ENSGALG00000009381 4019 1.571 - - - - - - 0.772 0.799 - - signal induced proliferation associated 1 like 1 [Source:NCBI gene;Acc:423255]
3. GATAD1 ENSGALG00000009399 4067 1.463 - - - - - - 0.745 0.718 - - GATA zinc finger domain containing 1 [Source:NCBI gene;Acc:420551]
4. RFC1 ENSGALG00000014298 6516 1.436 - - 0.714 - - - - 0.722 - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
5. MMGT1 ENSGALG00000027199 5854 0.864 - - - - - - - 0.864 - - membrane magnesium transporter 1 [Source:HGNC Symbol;Acc:HGNC:28100]
6. BRCA2 ENSGALG00000017073 2332 0.854 - - - - - - 0.854 - - - BRCA2, DNA repair associated [Source:NCBI gene;Acc:374139]
7. IFRD1 ENSGALG00000009448 8865 0.844 - - - - - - - 0.844 - - interferon related developmental regulator 1 [Source:NCBI gene;Acc:395226]
8. TBPL1 ENSGALG00000013981 3710 0.812 - - - - - - - 0.812 - - TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
9. FTSJ3 ENSGALG00000032993 8929 0.808 - - - - - - - 0.808 - - FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
10. CEP85L ENSGALG00000014892 8718 0.806 - - 0.806 - - - - - - - centrosomal protein 85 like [Source:HGNC Symbol;Acc:HGNC:21638]
11. TDP2 ENSGALG00000013637 6595 0.804 - - - - - - - 0.804 - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
12. SYS1 ENSGALG00000003929 4487 0.803 - - - - - - - 0.803 - - SYS1, golgi trafficking protein [Source:NCBI gene;Acc:419183]
13. DNMT3A ENSGALG00000041454 9607 0.799 - - - - - - - 0.799 - - DNA methyltransferase 3 alpha [Source:NCBI gene;Acc:421991]
14. SENP6 ENSGALG00000015901 8013 0.799 - - - - - - 0.799 - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
15. THUMPD2 ENSGALG00000009119 1783 0.798 - - - - - - 0.798 - - - THUMP domain containing 2 [Source:HGNC Symbol;Acc:HGNC:14890]
16. KTN1 ENSGALG00000012137 4058 0.797 - - - - - - - 0.797 - - kinectin 1 [Source:NCBI gene;Acc:396335]
17. SLC12A4 ENSGALG00000034179 5674 0.796 - - - - - - - 0.796 - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
18. RBM34 ENSGALG00000029915 5618 0.791 - - 0.791 - - - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
19. MDN1 ENSGALG00000015733 2352 0.788 - - 0.788 - - - - - - - midasin AAA ATPase 1, transcript variant X1
20. NUP93 ENSGALG00000003010 16504 0.787 - - - - - - - 0.787 - - nucleoporin 93 [Source:NCBI gene;Acc:415693]
21. DESI2 ENSGALG00000010678 4590 0.783 - - - - - - - 0.783 - - desumoylating isopeptidase 2 [Source:NCBI gene;Acc:421494]
22. EBNA1BP2 ENSGALG00000009045 17453 0.78 - - - - - - 0.780 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
23. LSM6 ENSGALG00000009985 18582 0.78 - - - - - - 0.780 - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
24. PHF20L1 ENSGALG00000033205 7598 0.78 - - - - - - 0.780 - - - PHD finger protein 20 like 1 [Source:NCBI gene;Acc:420323]
25. PLK1 ENSGALG00000006110 12892 0.779 - - - - - - - 0.779 - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
26. PCM1 ENSGALG00000013602 6347 0.779 - - - - - - - 0.779 - - pericentriolar material 1 [Source:NCBI gene;Acc:395204]
27. MSH2 ENSGALG00000008962 9709 0.779 - - - - - - - 0.779 - - mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]
28. SNX24 ENSGALG00000018874 4482 0.777 - - - - - - - 0.777 - - sorting nexin 24 [Source:NCBI gene;Acc:426798]
29. FAM175A 2036 0.776 - - - - - - 0.776 - - - family with sequence similarity 175 member A, transcript variant X1
30. WDR4 ENSGALG00000016187 1713 0.775 - - - - - - 0.775 - - - Gallus gallus WD repeat domain 4 (WDR4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321598]
31. AP3M2 ENSGALG00000038155 3372 0.774 - - - - - - 0.774 - - - adaptor related protein complex 3 subunit mu 2 [Source:HGNC Symbol;Acc:HGNC:570]
32. GCAT ENSGALG00000012312 7906 0.774 - - - - - - - 0.774 - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
33. RTEL1 ENSGALG00000006123 1317 0.772 - - - - - - - 0.772 - - regulator of telomere elongation helicase 1, transcript variant X6
34. UBE2J2 ENSGALG00000001848 6527 0.772 - - - - - - 0.772 - - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
35. NUP88 ENSGALG00000032280 9847 0.771 - - - - - - 0.771 - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
36. EPHA5 ENSGALG00000011680 906 0.77 - - - - - - 0.770 - - - EPH receptor A5 [Source:NCBI gene;Acc:395997]
37. OTUD1 ENSGALG00000026426 2120 0.77 - - 0.770 - - - - - - - OTU deubiquitinase 1 [Source:HGNC Symbol;Acc:HGNC:27346]
38. CENPO ENSGALG00000016609 1699 0.769 - - - - - - - 0.769 - - centromere protein O [Source:NCBI gene;Acc:422014]
39. NANS ENSGALG00000015320 10552 0.768 - - - - - - - 0.768 - - N-acetylneuraminate synthase [Source:NCBI gene;Acc:427283]
40. ARFIP1 ENSGALG00000041361 7351 0.768 - - - - - - - 0.768 - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
41. CTDSPL2 ENSGALG00000008199 3534 0.767 - - - - - - - 0.767 - - CTD small phosphatase like 2 [Source:NCBI gene;Acc:415574]
42. TM2D2 ENSGALG00000003356 7088 0.766 - - - - - - - 0.766 - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
43. DCPS ENSGALG00000031143 10191 0.766 - - - - - - - 0.766 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
44. AFF2 ENSGALG00000009168 99 0.766 - - 0.766 - - - - - - - AF4/FMR2 family member 2 [Source:HGNC Symbol;Acc:HGNC:3776]
45. TBRG4 ENSGALG00000038102 9269 0.766 - - - - - - - 0.766 - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
46. PDHB ENSGALG00000029576 12254 0.765 - - - - - - 0.765 - - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
47. PFKL ENSGALG00000006543 4361 0.764 - - - - - - - 0.764 - - Gallus gallus phosphofructokinase, liver type (PFKL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318442]
48. INCENP ENSGALG00000007537 16617 0.763 - - - - - - - 0.763 - - inner centromere protein [Source:NCBI gene;Acc:396270]
49. ARL5A ENSGALG00000041099 4592 0.763 - - - - - - - 0.763 - - ADP ribosylation factor like GTPase 5A [Source:HGNC Symbol;Acc:HGNC:696]
50. AZIN1 ENSGALG00000029295 11085 0.762 - - - - - - - 0.762 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
51. GRTP1 ENSGALG00000016828 3145 0.761 - - - - - - 0.761 - - - growth hormone regulated TBC protein 1 [Source:HGNC Symbol;Acc:HGNC:20310]
52. RCN2 ENSGALG00000039284 17848 0.76 - - - - - - - 0.760 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
53. AGO3 ENSGALG00000043711 5086 0.759 - - - - - - - 0.759 - - argonaute 3, RISC catalytic component [Source:NCBI gene;Acc:419628]
54. ZNF217 ZNF217 14511 0.759 - - - - - - - 0.759 - -
55. XBP1 ENSGALG00000005796 14007 0.759 - - - - - - - 0.759 - - X-box binding protein 1 [Source:NCBI gene;Acc:416918]
56. ATG5 ENSGALG00000015387 7752 0.758 - - - - - - 0.758 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
57. ZC3H3 ENSGALG00000043265 1638 0.757 - - - - - - 0.757 - - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
58. RAB40C ENSGALG00000030481 3095 0.757 - - - - - - - 0.757 - - RAB40C, member RAS oncogene family [Source:NCBI gene;Acc:769960]
59. ENSGALG00000001861 ENSGALG00000001861 10150 0.756 - - - - - - - 0.756 - -
60. ATP6V0E2 ENSGALG00000020754 2648 0.756 - - - - - - 0.756 - - - ATPase H+ transporting V0 subunit e2 [Source:NCBI gene;Acc:769770]
61. ERLIN2 ENSGALG00000003092 18251 0.755 - - - - - - - 0.755 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
62. FANCL ENSGALG00000030022 7423 0.755 - - - - - - - 0.755 - - FA complementation group L [Source:NCBI gene;Acc:421202]
63. MED28 ENSGALG00000007138 7686 0.755 - - - - - - 0.755 - - - mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]
64. SLC12A7 ENSGALG00000042396 2183 0.755 - - - - - - 0.755 - - - solute carrier family 12 member 7 [Source:NCBI gene;Acc:420797]
65. FAM18B1 ENSGALG00000001335 5177 0.753 - - - - - - - 0.753 - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
66. HCFC2 ENSGALG00000029616 4525 0.753 - - - - - - 0.753 - - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
67. NDUFS1 ENSGALG00000008606 7898 0.752 - - - - - - 0.752 - - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:NCBI gene;Acc:424102]
68. ELF1 ENSGALG00000016947 2769 0.75 - - - - - - 0.750 - - - E74 like ETS transcription factor 1 [Source:NCBI gene;Acc:418828]
69. ATR ENSGALG00000002663 4626 0.748 - - - - - - - 0.748 - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
70. CTSS ENSGALG00000000775 591 0.748 - - 0.748 - - - - - - - cathepsin S [Source:NCBI gene;Acc:425657]
71. ADSS ENSGALG00000010702 7207 0.748 - - - - - - - 0.748 - - adenylosuccinate synthase [Source:NCBI gene;Acc:428579]
72. SH3KBP1 ENSGALG00000016420 1739 0.747 - - - - - - 0.747 - - - SH3 domain containing kinase binding protein 1 [Source:NCBI gene;Acc:418608]
73. CHMP6 ENSGALG00000026428 18026 0.746 - - - - - - 0.746 - - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
74. GLIPR2 ENSGALG00000028821 5791 0.745 - - - - - - 0.745 - - - GLI pathogenesis related 2, transcript variant X2
75. PGGT1B ENSGALG00000008197 1881 0.744 - - - - - - 0.744 - - - protein geranylgeranyltransferase type I subunit beta [Source:HGNC Symbol;Acc:HGNC:8895]
76. CDK2AP1 ENSGALG00000034919 5469 0.744 - - - - - - - 0.744 - - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
77. NUDT14 ENSGALG00000028940 3795 0.744 - - - - - - 0.744 - - - nudix hydrolase 14 [Source:NCBI gene;Acc:423501]
78. IARS ENSGALG00000004813 12936 0.744 - - - - - - 0.744 - - - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
79. PTPMT1 ENSGALG00000008091 6160 0.743 - - - - - - - 0.743 - - protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:423181]
80. RAP1GDS1 ENSGALG00000012222 10078 0.743 - - - - - - - 0.743 - - rap1 GTPase-GDP dissociation stimulator 1 [Source:NCBI gene;Acc:422701]
81. CPSF3L CPSF3L 3584 0.743 - - - - - - - 0.743 - -
82. KIAA1143 ENSGALG00000035952 6735 0.743 - - - - - - - 0.743 - - KIAA1143 [Source:NCBI gene;Acc:420709]
83. RANGAP1 ENSGALG00000011966 20170 0.743 - - - - - - 0.743 - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
84. C4orf27 C4orf27 16724 0.742 - - - - - - 0.742 - - -
85. NUDCD1 ENSGALG00000040879 2965 0.742 - - 0.742 - - - - - - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
86. PARK2 166 0.741 - - 0.741 - - - - - - - parkin RBR E3 ubiquitin protein ligase
87. PLAA ENSGALG00000001782 5459 0.741 - - - - - - 0.741 - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
88. FADS1 ENSGALG00000007127 5231 0.74 - - - - - - 0.740 - - - fatty acid desaturase 1
89. ARHGAP19 ENSGALG00000007609 3655 0.74 - - - - - - - 0.740 - - Rho GTPase activating protein 19 [Source:NCBI gene;Acc:423846]
90. HEATR3 ENSGALG00000041613 2704 0.739 - - - - - - 0.739 - - - HEAT repeat containing 3 [Source:NCBI gene;Acc:415734]
91. CLTCL1 ENSGALG00000041760 9351 0.739 - - - - - - 0.739 - - - clathrin, heavy chain-like 1, transcript variant X6
92. MOB3A ENSGALG00000031729 9690 0.739 - - - - - - - 0.739 - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
93. KDM3B ENSGALG00000007663 7189 0.739 - - - - - - - 0.739 - - lysine demethylase 3B [Source:HGNC Symbol;Acc:HGNC:1337]
94. HSCB ENSGALG00000005706 12953 0.739 - - - - - - - 0.739 - - HscB mitochondrial iron-sulfur cluster cochaperone [Source:HGNC Symbol;Acc:HGNC:28913]
95. ENSGALG00000012451 ENSGALG00000012451 7912 0.739 - - - - - - - 0.739 - -
96. POLE2 ENSGALG00000012237 9023 0.737 - - - - - - 0.737 - - - DNA polymerase epsilon 2, accessory subunit [Source:NCBI gene;Acc:423567]
97. POLR3E ENSGALG00000007008 4010 0.736 - - - - - - - 0.736 - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
98. PHPT1 ENSGALG00000039061 17343 0.736 - - - - - - - 0.736 - - phosphohistidine phosphatase 1 [Source:NCBI gene;Acc:770750]
99. MKKS ENSGALG00000009013 9301 0.736 - - - - - - - 0.736 - - McKusick-Kaufman syndrome [Source:NCBI gene;Acc:416737]
100. RAD52 ENSGALG00000039171 6989 0.736 - - - - - - 0.736 - - - RAD52 homolog, DNA repair protein [Source:NCBI gene;Acc:418152]

There are 139 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA