Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HMGXB3

Gene Name Gene ID Reads Annotation
HMGXB3 ENSDARG00000077823 2 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]










Genes with expression patterns similar to HMGXB3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. HMGXB3 ENSDARG00000077823 2 4 - - - 1.000 - 1.000 - 1.000 1.000 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
2. CCDC18 ENSDARG00000078822 5 2 - - - 1.000 - - - - 1.000 coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
3. FP103003.1_1 FP103003.1_1 6 2 - - - 1.000 - - - - 1.000
4. CR356223.1 ENSDARG00000093865 1 2 - - - - - 1.000 - - 1.000
5. si:ch211-198e13.3 5 1.927 - - - - - 0.927 - - 1.000 si:ch211-198e13.3, transcript variant X1
6. ubb ENSDARG00000093313, ENSDARG00000112953 4 1.818 - - - 0.818 - - - - 1.000 ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]
7. pigf ENSDARG00000032780 7 1.818 - - - - - 1.000 - 0.818 - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
8. TMPRSS7 5 1.777 - - - - - 0.777 - - 1.000 transmembrane protease, serine 7
9. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 1.744 - - - 0.744 - 1.000 - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
10. chmp6b ENSDARG00000102024 37 1.664 - - - 0.733 - 0.931 - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
11. m17 ENSDARG00000035435 28 1 - - - - - 1.000 - - - IL-6 subfamily cytokine M17 [Source:ZFIN;Acc:ZDB-GENE-060526-368]
12. CMA1_8 CMA1_8 10 1 - - - - - 1.000 - - -
13. SYNPO 2 1 - - - - - - - - 1.000 synaptopodin, transcript variant X2
14. si:ch73-189n23.1 ENSDARG00000086247 15 1 - - - - - - - 1.000 - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
15. CELA1_2 CELA1_2 2 1 - - - - - 1.000 - - -
16. si:ch211-262i10.2 12 1 - - - 1.000 - - - - - si:ch211-262i10.2
17. CRFA31.2 CRFA31.2 12 1 - - - 1.000 - - - - -
18. si:zfos-979f1.2 ENSDARG00000011652 24 1 - - - - - - - - 1.000 si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
19. CYP27A1_2 CYP27A1_2 5 1 - - - - - - - - 1.000
20. cabp7b ENSDARG00000060846 5 1 - - - 1.000 - - - - - calcium binding protein 7b [Source:ZFIN;Acc:ZDB-GENE-060526-366]
21. phox2bb ENSDARG00000091029 2 1 - - - 1.000 - - - - - paired-like homeobox 2bb [Source:ZFIN;Acc:ZDB-GENE-050407-3]
22. si:dkey-284g18.1 si:dkey-284g18.1 2 1 - - - - - - - 1.000 -
23. si:ch211-145m1.3 3 1 - - - - - - - - 1.000 si:ch211-145m1.3
24. FAM46D FAM46D 0 1 - - - - - - - - 1.000
25. tusc3 ENSDARG00000078854 4 1 - - - - - - - - 1.000 tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
26. ripply2 ENSDARG00000070535 18 1 - - - - - 1.000 - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
27. zglp1 ENSDARG00000067669 6 1 - - - 1.000 - - - - - zinc finger, GATA-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-359]
28. ptx4 ENSDARG00000038072 2 1 - - - - - - - - 1.000 pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
29. cacna1hb ENSDARG00000099708 1 1 - - - - - - - 1.000 - calcium channel, voltage-dependent, T type, alpha 1H subunit b [Source:ZFIN;Acc:ZDB-GENE-090312-128]
30. si:ch211-89o5.3 si:ch211-89o5.3 5 1 - - - - - - - - 1.000
31. DSEL DSEL 1 1 - - - - - - - - 1.000
32. dcp2_1 ENSDARG00000104242 74 1 - - - - - - - - 1.000 decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
33. nr0b2b ENSDARG00000102756 2 1 - - - 1.000 - - - - - nuclear receptor subfamily 0, group B, member 2b [Source:ZFIN;Acc:ZDB-GENE-080403-9]
34. ca5 ca5 1 1 - - - - - - - 1.000 -
35. slc25a19 ENSDARG00000100385 2 1 - - - - - 1.000 - - - solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 [Source:ZFIN;Acc:ZDB-GENE-050417-292]
36. si:dkey-82i20.3 si:dkey-82i20.3 6 1 - - - - - - - - 1.000
37. si:dkeyp-51f11.3 si:dkeyp-51f11.3 0 1 - - - - - - - - 1.000
38. FIG4 ENSDARG00000107912 0 1 - - - - - - - - 1.000 FIG4 phosphoinositide 5-phosphatase [Source:HGNC Symbol;Acc:HGNC:16873]
39. BX321875.5 BX321875.5 1 1 - - - 1.000 - - - - -
40. btr29 ENSDARG00000099138 5 1 - - - 1.000 - - - - - bloodthirsty-related gene family, member 29 [Source:ZFIN;Acc:ZDB-GENE-090512-2]
41. epb41l3b ENSDARG00000019917 9 1 - - - - - - - 1.000 - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
42. MAPKBP1 ENSDARG00000103746 4 1 - - - - - - - 1.000 - mitogen-activated protein kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-120207-1]
43. si:ch211-170d8.5 ENSDARG00000046142 0 1 - - - - - - - - 1.000 si:ch211-170d8.5 [Source:ZFIN;Acc:ZDB-GENE-081105-120]
44. v2rh11 ENSDARG00000115088 1 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h11 [Source:ZFIN;Acc:ZDB-GENE-050419-222]
45. si:ch211-113a14.19_5 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 2 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
46. si:dkey-93m18.5 si:dkey-93m18.5 2 1 - - - - - - - - 1.000
47. SSTR2 SSTR2 12 1 - - - - - - - - 1.000
48. DNAJC11 1 1 - - - - - - - - 1.000 DnaJ heat shock protein family (Hsp40) member C11
49. phc2b ENSDARG00000013224 3 1 - - - - - - - 1.000 - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
50. BX284672.1 BX284672.1 11 1 - - - - - 1.000 - - -
51. POGK POGK 1 1 - - - - - 1.000 - - -
52. gp1bb ENSDARG00000074441 116 1 - - - - - 1.000 - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
53. mbd5 ENSDARG00000059581 1 1 - - - - - - - 1.000 - methyl-CpG binding domain protein 5 [Source:ZFIN;Acc:ZDB-GENE-070209-125]
54. BX323793.3 BX323793.3 7 1 - - - - - 1.000 - - -
55. wisp2 ENSDARG00000077882 3 1 - - - - - - - - 1.000 WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
56. si:dkey-199k11.5 si:dkey-199k11.5 4 1 - - - - - - - - 1.000
57. CR457462.1 CR457462.1 11 1 - - - - - - - - 1.000
58. als2a ENSDARG00000075111 29 1 - - - - - - - 1.000 - amyotrophic lateral sclerosis 2a (juvenile) [Source:ZFIN;Acc:ZDB-GENE-070402-2]
59. si:ch211-215l11.8 si:ch211-215l11.8 0 1 - - - - - - - - 1.000
60. lifra ENSDARG00000098857 11 1 - - - - - - - - 1.000 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
61. ZNF384 ZNF384 3 1 - - - 1.000 - - - - -
62. gba ENSDARG00000076058 1 1 - - - - - - - - 1.000 glucosidase, beta, acid [Source:ZFIN;Acc:ZDB-GENE-100922-270]
63. apba1a ENSDARG00000103848 0 1 - - - - - - - - 1.000 amyloid beta (A4) precursor protein-binding, family A, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-175]
64. CR394568.1 CR394568.1 0 1 - - - - - - - - 1.000
65. si:ch1073-351l9.1 si:ch1073-351l9.1 1 1 - - - - - - - - 1.000
66. si:ch211-12e13.12 ENSDARG00000094737 1 1 - - - - - - - - 1.000 si:ch211-12e13.12 [Source:ZFIN;Acc:ZDB-GENE-070424-121]
67. NAT14 ENSDARG00000115349 21 1 - - - - - 1.000 - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
68. SRCIN1_1 SRCIN1_1 11 1 - - - 1.000 - - - - -
69. BICD1 BICD1 9 1 - - - - - 1.000 - - -
70. TRIM14_8 TRIM14_8 5 1 - - - 1.000 - - - - -
71. PITPNM3 ENSDARG00000055255 3 1 - - - - - - - 1.000 - PITPNM family member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9216]
72. vtg4 ENSDARG00000078429, ENSDARG00000116698 0 1 - - - - - - - - 1.000 vitellogenin 4 [Source:ZFIN;Acc:ZDB-GENE-001201-3]
73. MYO1G ENSDARG00000036104 1 1 - - - - - - - - 1.000 myosin IG [Source:HGNC Symbol;Acc:HGNC:13880]
74. CCDC66 2 1 - - - - - - - - 1.000 coiled-coil domain containing 66
75. si:dkey-220o10.3 si:dkey-220o10.3 0 1 - - - - - - - - 1.000
76. mvb12bb ENSDARG00000079478 9 1 - - - - - - - - 1.000 multivesicular body subunit 12Bb [Source:ZFIN;Acc:ZDB-GENE-080414-2]
77. NMI 3 1 - - - - - 1.000 - - - N-myc (and STAT) interactor
78. si:ch211-197g22.1 si:ch211-197g22.1 1 1 - - - - - - - - 1.000
79. syt6a ENSDARG00000076730 4 1 - - - - - 1.000 - - - synaptotagmin VIa [Source:ZFIN;Acc:ZDB-GENE-090601-2]
80. BX321870.1 ENSDARG00000098519 9 1 - - - - - - - - 1.000
81. si:ch211-198m1.1 ENSDARG00000093192 0 1 - - - 1.000 - - - - - si:ch211-198m1.1 [Source:ZFIN;Acc:ZDB-GENE-091204-181]
82. FAM185A ENSDARG00000019142 3 1 - - - - - - - - 1.000 family with sequence similarity 185, member A [Source:ZFIN;Acc:ZDB-GENE-131121-241]
83. rhobtb2b ENSDARG00000089340 4 1 - - - - - 1.000 - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
84. C5AR1 1 1 - - - 1.000 - - - - - C5a anaphylatoxin chemotactic receptor
85. CABZ01071407.1 CABZ01071407.1 6 1 - - - - - - - 1.000 -
86. ARAP1 3 1 - - - - - - - - 1.000 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
87. s1pr4 ENSDARG00000074851 4 1 - - - 1.000 - - - - - sphingosine-1-phosphate receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050506-8]
88. CNGB3 CNGB3 7 1 - - - - - - - - 1.000
89. or131-2 ENSDARG00000073812 0 1 - - - - - - - - 1.000 odorant receptor, family H, subfamily 131, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-46]
90. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - - - - - - - - 1.000 si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
91. ccdc14 ENSDARG00000098734 3 1 - - - - - 1.000 - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
92. f7i ENSDARG00000075827 4 1 - - - - - - - 1.000 - coagulation factor VIIi [Source:ZFIN;Acc:ZDB-GENE-021206-10]
93. fscn2a ENSDARG00000059574 2 1 - - - 1.000 - - - - - fascin actin-bundling protein 2a, retinal [Source:ZFIN;Acc:ZDB-GENE-110901-1]
94. moxd1l ENSDARG00000069296, ENSDARG00000115126 2 1 - - - - - - - 1.000 - monooxygenase, DBH-like 1, like [Source:ZFIN;Acc:ZDB-GENE-060126-3]
95. crybb1l2 ENSDARG00000016793 723 1 - - - - - 1.000 - - - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
96. ccdc41 ccdc41 97 1 - - - - - 1.000 - - -
97. si:ch211-95j8.3 ENSDARG00000092580 20 1 - - - - - - - 1.000 - si:ch211-95j8.3 [Source:ZFIN;Acc:ZDB-GENE-091204-307]
98. si:ch211-145h19.4 si:ch211-145h19.4 1 1 - - - - - - - - 1.000
99. irf1b ENSDARG00000043249 30 1 - - - - - 1.000 - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
100. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - - - - - - - - 1.000

There are 493 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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