Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HMGXB3

Gene Name Gene ID Reads Annotation
HMGXB3 ENSDARG00000077823 2 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]










Genes with expression patterns similar to HMGXB3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. HMGXB3 ENSDARG00000077823 2 4 - - - 1.000 - 1.000 - 1.000 1.000 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
2. FP103003.1_1 FP103003.1_1 6 2 - - - 1.000 - - - - 1.000
3. CCDC18 ENSDARG00000078822 5 2 - - - 1.000 - - - - 1.000 coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
4. CR356223.1 ENSDARG00000093865 1 2 - - - - - 1.000 - - 1.000
5. si:ch211-198e13.3 5 1.927 - - - - - 0.927 - - 1.000 si:ch211-198e13.3, transcript variant X1
6. pigf ENSDARG00000032780 7 1.818 - - - - - 1.000 - 0.818 - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
7. ubb ENSDARG00000093313, ENSDARG00000112953 4 1.818 - - - 0.818 - - - - 1.000 ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]
8. TMPRSS7 5 1.777 - - - - - 0.777 - - 1.000 transmembrane protease, serine 7
9. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 1.744 - - - 0.744 - 1.000 - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
10. chmp6b ENSDARG00000102024 37 1.664 - - - 0.733 - 0.931 - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
11. CT573356.3 CT573356.3 2 1 - - - - - 1.000 - - -
12. SYNPO 2 1 - - - - - - - - 1.000 synaptopodin, transcript variant X2
13. KIAA0319 KIAA0319 2 1 - - - - - - - - 1.000
14. GABRA2 ENSDARG00000113737 5 1 - - - - - - - - 1.000 gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
15. si:dkey-100h21.2 si:dkey-100h21.2 30 1 - - - 1.000 - - - - -
16. zgc:172323 ENSDARG00000053201 1 1 - - - - - - - - 1.000 zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
17. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - - - 1.000
18. slc5a5 ENSDARG00000005392 6 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
19. scn1a 8 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
20. agtr1a ENSDARG00000018616 1 1 - - - - - - - - 1.000 angiotensin II receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070912-546]
21. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
22. zgc:153759 ENSDARG00000068969, ENSDARG00000092381 44 1 - - - - - 1.000 - - - zgc:153759 [Source:ZFIN;Acc:ZDB-GENE-060825-148]
23. si:ch1073-109g21.1 si:ch1073-109g21.1 0 1 - - - - - - - - 1.000
24. si:ch73-343l4.8 ENSDARG00000077975 4 1 - - - 1.000 - - - - - si:ch73-343l4.8 [Source:ZFIN;Acc:ZDB-GENE-090313-159]
25. tecpr1a ENSDARG00000062515 7 1 - - - - - - - - 1.000 tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
26. ARAP1 3 1 - - - - - - - - 1.000 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
27. si:dkey-199k11.5 si:dkey-199k11.5 4 1 - - - - - - - - 1.000
28. uts1 ENSDARG00000014927 35 1 - - - - - 1.000 - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
29. CNGB3 CNGB3 7 1 - - - - - - - - 1.000
30. syt15 ENSDARG00000079926 8 1 - - - - - 1.000 - - - synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
31. OTOS ENSDARG00000108475 180 1 - - - - - 1.000 - - - otospiralin [Source:ZFIN;Acc:ZDB-GENE-120601-1]
32. BX548067.1 ENSDARG00000103045 0 1 - - - - - - - 1.000 - si:dkey-261o4.8 [Source:NCBI gene;Acc:100537246]
33. irak1 ENSDARG00000025949 19 1 - - - - - 1.000 - - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
34. ttc6 ENSDARG00000104125 7 1 - - - - - - - - 1.000 tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
35. large 9 1 - - - 1.000 - - - - - like-glycosyltransferase, transcript variant X1
36. si:ch211-12e13.12 ENSDARG00000094737 1 1 - - - - - - - - 1.000 si:ch211-12e13.12 [Source:ZFIN;Acc:ZDB-GENE-070424-121]
37. SEMA4F ENSDARG00000100308 1 1 - - - - - - - - 1.000 ssemaphorin 4F [Source:HGNC Symbol;Acc:HGNC:10734]
38. mov10b.2 ENSDARG00000056065, ENSDARG00000111814 3 1 - - - - - - - 1.000 - Moloney leukemia virus 10b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060526-371]
39. clec3ba ENSDARG00000076541 3 1 - - - - - - - - 1.000 C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
40. men1_1 ENSDARG00000089456 3 1 - - - 1.000 - - - - - multiple endocrine neoplasia I [Source:ZFIN;Acc:ZDB-GENE-991110-12]
41. moxd1l ENSDARG00000069296, ENSDARG00000115126 2 1 - - - - - - - 1.000 - monooxygenase, DBH-like 1, like [Source:ZFIN;Acc:ZDB-GENE-060126-3]
42. si:ch211-125e6.12 ENSDARG00000092090 3 1 - - - - - 1.000 - - - si:ch211-125e6.12 [Source:ZFIN;Acc:ZDB-GENE-070912-36]
43. CABZ01080434.1 ENSDARG00000102438 4 1 - - - 1.000 - - - - -
44. skila ENSDARG00000023933 2 1 - - - - - - - - 1.000 SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
45. TGFBR2 TGFBR2 2 1 - - - - - 1.000 - - -
46. slc45a3 ENSDARG00000075975 1 1 - - - 1.000 - - - - - solute carrier family 45, member 3 [Source:ZFIN;Acc:ZDB-GENE-070509-3]
47. BX470083.4 ENSDARG00000115059 8 1 - - - 1.000 - - - - -
48. arhgap21a ENSDARG00000104295 1 1 - - - - - - - - 1.000 Rho GTPase activating protein 21a [Source:ZFIN;Acc:ZDB-GENE-090918-5]
49. phox2bb ENSDARG00000091029 2 1 - - - 1.000 - - - - - paired-like homeobox 2bb [Source:ZFIN;Acc:ZDB-GENE-050407-3]
50. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - - - - 1.000 si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
51. NOX4 3 1 - - - - - 1.000 - - - NADPH oxidase 4
52. CABZ01030692.1 CABZ01030692.1 0 1 - - - - - - - - 1.000
53. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - - - - 1.000 tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
54. rhbdd3 ENSDARG00000079816 2 1 - - - - - - - - 1.000 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
55. CU459094.2 ENSDARG00000113503 5 1 - - - - - - - 1.000 - uncharacterized LOC100331538 [Source:NCBI gene;Acc:100331538]
56. BX248582.3 BX248582.3 3 1 - - - 1.000 - - - - -
57. cyp2p9 ENSDARG00000022631 1 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily P, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-040120-2]
58. ZNF384 ZNF384 3 1 - - - 1.000 - - - - -
59. CU467982.1 CU467982.1 12 1 - - - - - - - - 1.000
60. si:dkey-98f17.5 ENSDARG00000068863, ENSDARG00000116489 7 1 - - - - - - - - 1.000 si:dkey-98f17.5 [Source:ZFIN;Acc:ZDB-GENE-060526-354]
61. cdc14aa ENSDARG00000013858 18 1 - - - - - - - - 1.000 cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
62. cyp2n13 ENSDARG00000042953 10 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
63. PITPNM3 ENSDARG00000055255 3 1 - - - - - - - 1.000 - PITPNM family member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9216]
64. LIX1 ENSDARG00000052154 9 1 - - - - - - - - 1.000 limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
65. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - - - - - - 1.000 potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
66. oscp1a ENSDARG00000101222, ENSDARG00000104403 17 1 - - - - - 1.000 - - - organic solute carrier partner 1a [Source:ZFIN;Acc:ZDB-GENE-080204-2]
67. crybb1l2 ENSDARG00000016793 723 1 - - - - - 1.000 - - - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
68. BX004880.2 BX004880.2 83 1 - - - - - 1.000 - - -
69. slc6a4b ENSDARG00000057017 18 1 - - - 1.000 - - - - - solute carrier family 6 (neurotransmitter transporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-060314-2]
70. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - - - - - - - - 1.000
71. CABZ01112210.1 CABZ01112210.1 48 1 - - - - - 1.000 - - -
72. si:ch211-198m1.1 ENSDARG00000093192 0 1 - - - 1.000 - - - - - si:ch211-198m1.1 [Source:ZFIN;Acc:ZDB-GENE-091204-181]
73. DNAJC11 1 1 - - - - - - - - 1.000 DnaJ heat shock protein family (Hsp40) member C11
74. ddrgk1 ENSDARG00000037172 14 1 - - - 1.000 - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
75. si:ch211-197g22.1 si:ch211-197g22.1 1 1 - - - - - - - - 1.000
76. m17 ENSDARG00000035435 28 1 - - - - - 1.000 - - - IL-6 subfamily cytokine M17 [Source:ZFIN;Acc:ZDB-GENE-060526-368]
77. vtg3 ENSDARG00000016448 8 1 - - - - - 1.000 - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
78. si:ch211-170d12.2 si:ch211-170d12.2 1 1 - - - 1.000 - - - - -
79. CR774179.1 ENSDARG00000086969 3 1 - - - - - - - - 1.000
80. si:dkey-270b7.4 si:dkey-270b7.4 11 1 - - - - - - - 1.000 -
81. BX294190.1 BX294190.1 17 1 - - - 1.000 - - - - -
82. vtg4 ENSDARG00000078429, ENSDARG00000116698 0 1 - - - - - - - - 1.000 vitellogenin 4 [Source:ZFIN;Acc:ZDB-GENE-001201-3]
83. il12bb ENSDARG00000054542 6 1 - - - - - 1.000 - - - interleukin 12B, b [Source:ZFIN;Acc:ZDB-GENE-030131-7937]
84. btr29 ENSDARG00000099138 5 1 - - - 1.000 - - - - - bloodthirsty-related gene family, member 29 [Source:ZFIN;Acc:ZDB-GENE-090512-2]
85. BX323854.4 BX323854.4 3 1 - - - - - 1.000 - - -
86. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
87. crp6 ENSDARG00000071457 2 1 - - - 1.000 - - - - - C-reactive protein 6 [Source:ZFIN;Acc:ZDB-GENE-060503-881]
88. si:dkey-40h20.1 ENSDARG00000095252 5 1 - - - 1.000 - - - - - si:dkey-40h20.1 [Source:ZFIN;Acc:ZDB-GENE-091113-44]
89. SRCIN1_1 SRCIN1_1 11 1 - - - 1.000 - - - - -
90. htr5al htr5al 6 1 - - - - - - - - 1.000
91. FAM185A ENSDARG00000019142 3 1 - - - - - - - - 1.000 family with sequence similarity 185, member A [Source:ZFIN;Acc:ZDB-GENE-131121-241]
92. TSPAN1 ENSDARG00000052027 4 1 - - - - - 1.000 - - - tetraspanin 1 [Source:ZFIN;Acc:ZDB-GENE-070502-5]
93. syt6a ENSDARG00000076730 4 1 - - - - - 1.000 - - - synaptotagmin VIa [Source:ZFIN;Acc:ZDB-GENE-090601-2]
94. si:ch211-262i10.2 12 1 - - - 1.000 - - - - - si:ch211-262i10.2
95. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1 - - - 1.000 - - - - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
96. or131-2 ENSDARG00000073812 0 1 - - - - - - - - 1.000 odorant receptor, family H, subfamily 131, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-46]
97. BX546499.1 ENSDARG00000092602 1 1 - - - - - - - - 1.000
98. RBBP6_3 RBBP6_3 34 1 - - - - - - - - 1.000
99. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - - - - 1.000 solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
100. pdk3a ENSDARG00000014527 15 1 - - - - - 1.000 - - - pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]

There are 493 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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