Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HMGXB3

Gene Name Gene ID Reads Annotation
HMGXB3 ENSDARG00000077823 2 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]










Genes with expression patterns similar to HMGXB3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. HMGXB3 ENSDARG00000077823 2 4 - - - 1.000 - 1.000 - 1.000 1.000 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
2. CCDC18 ENSDARG00000078822 5 2 - - - 1.000 - - - - 1.000 coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
3. CR356223.1 ENSDARG00000093865 1 2 - - - - - 1.000 - - 1.000
4. FP103003.1_1 FP103003.1_1 6 2 - - - 1.000 - - - - 1.000
5. si:ch211-198e13.3 5 1.927 - - - - - 0.927 - - 1.000 si:ch211-198e13.3, transcript variant X1
6. pigf ENSDARG00000032780 7 1.818 - - - - - 1.000 - 0.818 - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
7. ubb ENSDARG00000093313, ENSDARG00000112953 4 1.818 - - - 0.818 - - - - 1.000 ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]
8. TMPRSS7 5 1.777 - - - - - 0.777 - - 1.000 transmembrane protease, serine 7
9. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 1.744 - - - 0.744 - 1.000 - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
10. chmp6b ENSDARG00000102024 37 1.664 - - - 0.733 - 0.931 - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
11. themis ENSDARG00000010619 5 1 - - - - - 1.000 - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
12. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - - - - - - - - 1.000 si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
13. C5AR1 1 1 - - - 1.000 - - - - - C5a anaphylatoxin chemotactic receptor
14. or115-12 ENSDARG00000044748 2 1 - - - - - 1.000 - - - odorant receptor, family F, subfamily 115, member 12 [Source:ZFIN;Acc:ZDB-GENE-070806-13]
15. C1QTNF6 C1QTNF6 2 1 - - - - - 1.000 - - -
16. si:dkey-165b20.3 ENSDARG00000099544 6 1 - - - - - - - 1.000 - si:dkey-165b20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-172]
17. Metazoa_SRP Metazoa_SRP 1 1 - - - - - - - - 1.000
18. CRFA31.2 CRFA31.2 12 1 - - - 1.000 - - - - -
19. FNDC3A ENSDARG00000105503 11 1 - - - - - 1.000 - - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
20. CABZ01071407.1 CABZ01071407.1 6 1 - - - - - - - 1.000 -
21. si:dkey-78a14.5 14 1 - - - 1.000 - - - - - si:dkey-78a14.5, transcript variant X2
22. CU302316.1 ENSDARG00000109600 2 1 - - - - - - - - 1.000
23. CABZ01074669.1 CABZ01074669.1 12 1 - - - - - - - - 1.000
24. CR848836.1 ENSDARG00000097508 1 1 - - - 1.000 - - - - -
25. CR394568.1 CR394568.1 0 1 - - - - - - - - 1.000
26. SSTR2 SSTR2 12 1 - - - - - - - - 1.000
27. C12H16orf93 C12H16orf93 1 1 - - - - - 1.000 - - -
28. tusc3 ENSDARG00000078854 4 1 - - - - - - - - 1.000 tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
29. si:ch211-117l17.4 ENSDARG00000103534 24 1 - - - - - 1.000 - - - si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
30. FAM196A 82 1 - - - - - 1.000 - - - family with sequence similarity 196 member A
31. CT030048.2 CT030048.2 3 1 - - - - - - - - 1.000
32. olfcg2 ENSDARG00000101083 8 1 - - - - - 1.000 - - - olfactory receptor C family, g2 [Source:ZFIN;Acc:ZDB-GENE-060503-253]
33. NINJ1 ENSDARG00000103663 43 1 - - - - - 1.000 - - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
34. ZC2HC1C ENSDARG00000070526 14 1 - - - - - 1.000 - - - zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
35. MEI1 MEI1 2 1 - - - - - - - - 1.000
36. GPT GPT 2 1 - - - - - - - - 1.000
37. mbd5 ENSDARG00000059581 1 1 - - - - - - - 1.000 - methyl-CpG binding domain protein 5 [Source:ZFIN;Acc:ZDB-GENE-070209-125]
38. BX321870.1 ENSDARG00000098519 9 1 - - - - - - - - 1.000
39. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
40. si:ch211-214p13.7 1 1 - - - - - - - - 1.000 si:ch211-214p13.7
41. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - - - - - - - - 1.000
42. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - - - - 1.000 chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
43. tbl2 ENSDARG00000043357 125 1 - - - - - 1.000 - - - transducin (beta)-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9012]
44. PRTFDC1 ENSDARG00000011683 11 1 - - - - - 1.000 - - - phosphoribosyl transferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-980526-324]
45. TRIM35_7 TRIM35_7 22 1 - - - 1.000 - - - - -
46. si:ch73-177h5.2 ENSDARG00000020812 0 1 - - - - - - - - 1.000 si:ch73-177h5.2 [Source:ZFIN;Acc:ZDB-GENE-081104-247]
47. FIG4 ENSDARG00000107912 0 1 - - - - - - - - 1.000 FIG4 phosphoinositide 5-phosphatase [Source:HGNC Symbol;Acc:HGNC:16873]
48. MLXIPL ENSDARG00000089107, ENSDARG00000104054 5 1 - - - - - - - 1.000 - MLX interacting protein like [Source:ZFIN;Acc:ZDB-GENE-100922-66]
49. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - - - - - 1.000
50. si:ch211-113a14.19_5 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 2 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
51. BX321875.5 BX321875.5 1 1 - - - 1.000 - - - - -
52. thbs4a ENSDARG00000102777 625 1 - - - - - 1.000 - - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
53. TMEM121_1 TMEM121_1 22 1 - - - - - 1.000 - - -
54. trpm5 ENSDARG00000059792 3 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily M, member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-736]
55. si:ch73-27e22.3 ENSDARG00000077263 10 1 - - - - - - - - 1.000 si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
56. si:dkey-101d6.4 si:dkey-101d6.4 6 1 - - - 1.000 - - - - -
57. si:ch211-89o5.3 si:ch211-89o5.3 5 1 - - - - - - - - 1.000
58. DSEL DSEL 1 1 - - - - - - - - 1.000
59. BX323793.3 BX323793.3 7 1 - - - - - 1.000 - - -
60. TDRD6 ENSDARG00000070052 1 1 - - - - - - - - 1.000 tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
61. si:dkeyp-82h4.3 ENSDARG00000102062 0 1 - - - 1.000 - - - - - si:dkeyp-82h4.3 [Source:ZFIN;Acc:ZDB-GENE-120709-17]
62. CR318624.1 ENSDARG00000094618 5 1 - - - - - - - - 1.000
63. POGK POGK 1 1 - - - - - 1.000 - - -
64. cldn10l2 ENSDARG00000105042 11 1 - - - - - 1.000 - - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
65. zgc:162724 zgc:162724 9 1 - - - - - - - - 1.000
66. gba ENSDARG00000076058 1 1 - - - - - - - - 1.000 glucosidase, beta, acid [Source:ZFIN;Acc:ZDB-GENE-100922-270]
67. ripply2 ENSDARG00000070535 18 1 - - - - - 1.000 - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
68. wisp2 ENSDARG00000077882 3 1 - - - - - - - - 1.000 WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
69. il17c ENSDARG00000057180, ENSDARG00000109701 3 1 - - - - - 1.000 - - - interleukin 17c [Source:ZFIN;Acc:ZDB-GENE-061031-5]
70. si:dkey-93m18.5 si:dkey-93m18.5 2 1 - - - - - - - - 1.000
71. ccdc24 ENSDARG00000038793 7 1 - - - - - - - - 1.000 coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
72. CABZ01081747.2 CABZ01081747.2 9 1 - - - - - - - - 1.000
73. NPM2 NPM2 41 1 - - - - - - - - 1.000
74. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - - - - - 1.000
75. CT737184.1 ENSDARG00000102726 0 1 - - - - - - - - 1.000
76. BX004873.4 BX004873.4 0 1 - - - - - - - - 1.000
77. vcam1a ENSDARG00000078201 1 1 - - - - - - - - 1.000 vascular cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-172]
78. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - - - - - - - 1.000 si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
79. si:ch1073-312b22.1 si:ch1073-312b22.1 6 1 - - - 1.000 - - - - -
80. CCDC66 2 1 - - - - - - - - 1.000 coiled-coil domain containing 66
81. ca5 ca5 1 1 - - - - - - - 1.000 -
82. NAT14 ENSDARG00000115349 21 1 - - - - - 1.000 - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
83. TAAR1 TAAR1 0 1 - - - - - - - - 1.000
84. CD44 CD44 11 1 - - - 1.000 - - - - -
85. mybpc2a ENSDARG00000030157 11 1 - - - - - - - - 1.000 myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
86. TRIM14_8 TRIM14_8 5 1 - - - 1.000 - - - - -
87. GMEB2 ENSDARG00000093240 6 1 - - - - - 1.000 - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
88. itga2.1 ENSDARG00000069390 6 1 - - - - - 1.000 - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-111011-4]
89. grin2cb ENSDARG00000077560 9 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
90. fscn2a ENSDARG00000059574 2 1 - - - 1.000 - - - - - fascin actin-bundling protein 2a, retinal [Source:ZFIN;Acc:ZDB-GENE-110901-1]
91. si:ch211-170d8.5 ENSDARG00000046142 0 1 - - - - - - - - 1.000 si:ch211-170d8.5 [Source:ZFIN;Acc:ZDB-GENE-081105-120]
92. si:zfos-979f1.2 ENSDARG00000011652 24 1 - - - - - - - - 1.000 si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
93. phc2b ENSDARG00000013224 3 1 - - - - - - - 1.000 - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
94. si:dkey-179k24.3 si:dkey-179k24.3 3 1 - - - 1.000 - - - - -
95. si:ch1073-351l9.1 si:ch1073-351l9.1 1 1 - - - - - - - - 1.000
96. GGT5 GGT5 1 1 - - - - - - - - 1.000
97. ppid_1 ENSDARG00000038835 4 1 - - - - - - - - 1.000 peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
98. ptger2a ENSDARG00000011434 6 1 - - - - - - - - 1.000 prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
99. cabp7b ENSDARG00000060846 5 1 - - - 1.000 - - - - - calcium binding protein 7b [Source:ZFIN;Acc:ZDB-GENE-060526-366]
100. C1S ENSDARG00000100599 20 1 - - - - - - - 1.000 - complement component 1, s subcomponent [Source:ZFIN;Acc:ZDB-GENE-030131-1232]

There are 493 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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