Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HMGXB3

Gene Name Gene ID Reads Annotation
HMGXB3 ENSDARG00000077823 2 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]










Genes with expression patterns similar to HMGXB3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. HMGXB3 ENSDARG00000077823 2 4 - - - 1.000 - 1.000 - 1.000 1.000 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
2. FP103003.1_1 FP103003.1_1 6 2 - - - 1.000 - - - - 1.000
3. CCDC18 ENSDARG00000078822 5 2 - - - 1.000 - - - - 1.000 coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
4. CR356223.1 ENSDARG00000093865 1 2 - - - - - 1.000 - - 1.000
5. si:ch211-198e13.3 5 1.927 - - - - - 0.927 - - 1.000 si:ch211-198e13.3, transcript variant X1
6. pigf ENSDARG00000032780 7 1.818 - - - - - 1.000 - 0.818 - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
7. ubb ENSDARG00000093313, ENSDARG00000112953 4 1.818 - - - 0.818 - - - - 1.000 ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]
8. TMPRSS7 5 1.777 - - - - - 0.777 - - 1.000 transmembrane protease, serine 7
9. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 1.744 - - - 0.744 - 1.000 - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
10. chmp6b ENSDARG00000102024 37 1.664 - - - 0.733 - 0.931 - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
11. VWA5A_1 VWA5A_1 6 1 - - - - - - - 1.000 -
12. DNAJC11 1 1 - - - - - - - - 1.000 DnaJ heat shock protein family (Hsp40) member C11
13. CNGB3 CNGB3 7 1 - - - - - - - - 1.000
14. lifra ENSDARG00000098857 11 1 - - - - - - - - 1.000 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
15. si:ch1073-312b22.1 si:ch1073-312b22.1 6 1 - - - 1.000 - - - - -
16. PLA2G4C_1 PLA2G4C_1 2 1 - - - - - - - - 1.000
17. si:ch211-233m11.1 ENSDARG00000074653 1 1 - - - - - - - - 1.000 si:ch211-233m11.1 [Source:ZFIN;Acc:ZDB-GENE-081028-16]
18. men1_1 ENSDARG00000089456 3 1 - - - 1.000 - - - - - multiple endocrine neoplasia I [Source:ZFIN;Acc:ZDB-GENE-991110-12]
19. C12H16orf93 C12H16orf93 1 1 - - - - - 1.000 - - -
20. FAM46D FAM46D 0 1 - - - - - - - - 1.000
21. si:dkey-176f19.7 ENSDARG00000103348 10 1 - - - - - - - - 1.000 si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
22. si:zfos-979f1.2 ENSDARG00000011652 24 1 - - - - - - - - 1.000 si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
23. FJX1 ENSDARG00000035873 22 1 - - - - - - - - 1.000 four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
24. DSEL DSEL 1 1 - - - - - - - - 1.000
25. CABZ01056274.1 CABZ01056274.1 3 1 - - - - - - - - 1.000
26. si:ch211-198m1.1 ENSDARG00000093192 0 1 - - - 1.000 - - - - - si:ch211-198m1.1 [Source:ZFIN;Acc:ZDB-GENE-091204-181]
27. prkacbb ENSDARG00000059125 7 1 - - - 1.000 - - - - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
28. si:dkey-40h20.1 ENSDARG00000095252 5 1 - - - 1.000 - - - - - si:dkey-40h20.1 [Source:ZFIN;Acc:ZDB-GENE-091113-44]
29. CYP27A1_2 CYP27A1_2 5 1 - - - - - - - - 1.000
30. si:dkeyp-51f11.3 si:dkeyp-51f11.3 0 1 - - - - - - - - 1.000
31. il17c ENSDARG00000057180, ENSDARG00000109701 3 1 - - - - - 1.000 - - - interleukin 17c [Source:ZFIN;Acc:ZDB-GENE-061031-5]
32. si:ch73-27e22.3 ENSDARG00000077263 10 1 - - - - - - - - 1.000 si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
33. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
34. si:ch211-196n4.2 si:ch211-196n4.2 0 1 - - - - - - - - 1.000
35. PDE6H 3 1 - - - - - - - - 1.000 phosphodiesterase 6H, cGMP-specific, cone, gamma, transcript variant 2
36. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - - - - - - - - 1.000
37. irak1 ENSDARG00000025949 19 1 - - - - - 1.000 - - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
38. si:ch1073-109g21.1 si:ch1073-109g21.1 0 1 - - - - - - - - 1.000
39. als2a ENSDARG00000075111 29 1 - - - - - - - 1.000 - amyotrophic lateral sclerosis 2a (juvenile) [Source:ZFIN;Acc:ZDB-GENE-070402-2]
40. fam166b ENSDARG00000100292 14 1 - - - - - 1.000 - - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
41. CDR2_1 CDR2_1 8 1 - - - - - - - - 1.000
42. rhobtb2b ENSDARG00000089340 4 1 - - - - - 1.000 - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
43. GGT5 GGT5 1 1 - - - - - - - - 1.000
44. ulk1a ENSDARG00000062518 10 1 - - - - - - - 1.000 - unc-51 like autophagy activating kinase 1a [Source:ZFIN;Acc:ZDB-GENE-080723-31]
45. CABZ01084273.1 CABZ01084273.1 16 1 - - - - - 1.000 - - -
46. si:ch211-278p9.3 ENSDARG00000094098 0 1 - - - - - - - - 1.000 si:ch211-278p9.3 [Source:ZFIN;Acc:ZDB-GENE-081028-38]
47. lcp2b ENSDARG00000036215 15 1 - - - 1.000 - - - - - lymphocyte cytosolic protein 2b [Source:ZFIN;Acc:ZDB-GENE-081107-21]
48. CABZ01080434.1 ENSDARG00000102438 4 1 - - - 1.000 - - - - -
49. scn1a 8 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
50. MAPKBP1 ENSDARG00000103746 4 1 - - - - - - - 1.000 - mitogen-activated protein kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-120207-1]
51. CABZ01071407.1 CABZ01071407.1 6 1 - - - - - - - 1.000 -
52. or115-12 ENSDARG00000044748 2 1 - - - - - 1.000 - - - odorant receptor, family F, subfamily 115, member 12 [Source:ZFIN;Acc:ZDB-GENE-070806-13]
53. si:ch211-117l17.4 ENSDARG00000103534 24 1 - - - - - 1.000 - - - si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
54. BX548067.1 ENSDARG00000103045 0 1 - - - - - - - 1.000 - si:dkey-261o4.8 [Source:NCBI gene;Acc:100537246]
55. dcp2_1 ENSDARG00000104242 74 1 - - - - - - - - 1.000 decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
56. si:dkey-149m13.2 si:dkey-149m13.2 1 1 - - - - - - - - 1.000
57. si:ch211-12e13.12 ENSDARG00000094737 1 1 - - - - - - - - 1.000 si:ch211-12e13.12 [Source:ZFIN;Acc:ZDB-GENE-070424-121]
58. ripply2 ENSDARG00000070535 18 1 - - - - - 1.000 - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
59. zgc:172323 ENSDARG00000053201 1 1 - - - - - - - - 1.000 zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
60. skila ENSDARG00000023933 2 1 - - - - - - - - 1.000 SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
61. CR925813.2 CR925813.2 9 1 - - - - - - - 1.000 -
62. slc5a5 ENSDARG00000005392 6 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
63. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
64. rhbdd3 ENSDARG00000079816 2 1 - - - - - - - - 1.000 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
65. BICD1 BICD1 9 1 - - - - - 1.000 - - -
66. CR394568.1 CR394568.1 0 1 - - - - - - - - 1.000
67. mov10b.2 ENSDARG00000056065, ENSDARG00000111814 3 1 - - - - - - - 1.000 - Moloney leukemia virus 10b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060526-371]
68. BX321870.1 ENSDARG00000098519 9 1 - - - - - - - - 1.000
69. si:dkey-78a14.5 14 1 - - - 1.000 - - - - - si:dkey-78a14.5, transcript variant X2
70. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - - - - - 1.000 si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
71. si:ch211-215l11.8 si:ch211-215l11.8 0 1 - - - - - - - - 1.000
72. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
73. zgc:194418 ENSDARG00000111790 1 1 - - - - - - - 1.000 - zgc:194418 [Source:ZFIN;Acc:ZDB-GENE-080723-5]
74. si:ch211-214p13.7 1 1 - - - - - - - - 1.000 si:ch211-214p13.7
75. themis ENSDARG00000010619 5 1 - - - - - 1.000 - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
76. si:dkey-270b7.4 si:dkey-270b7.4 11 1 - - - - - - - 1.000 -
77. CRFA31.2 CRFA31.2 12 1 - - - 1.000 - - - - -
78. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1 - - - - - 1.000 - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
79. si:dkey-220o10.3 si:dkey-220o10.3 0 1 - - - - - - - - 1.000
80. cldn10l2 ENSDARG00000105042 11 1 - - - - - 1.000 - - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
81. si:ch73-177h5.2 ENSDARG00000020812 0 1 - - - - - - - - 1.000 si:ch73-177h5.2 [Source:ZFIN;Acc:ZDB-GENE-081104-247]
82. C1S ENSDARG00000100599 20 1 - - - - - - - 1.000 - complement component 1, s subcomponent [Source:ZFIN;Acc:ZDB-GENE-030131-1232]
83. ZC2HC1C ENSDARG00000070526 14 1 - - - - - 1.000 - - - zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
84. slc15a1b ENSDARG00000044528 6 1 - - - - - - - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
85. CABZ01081747.2 CABZ01081747.2 9 1 - - - - - - - - 1.000
86. CABZ01030692.1 CABZ01030692.1 0 1 - - - - - - - - 1.000
87. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - - - - - - - 1.000 si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
88. CR457462.1 CR457462.1 11 1 - - - - - - - - 1.000
89. ttc6 ENSDARG00000104125 7 1 - - - - - - - - 1.000 tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
90. grin2cb ENSDARG00000077560 9 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
91. FAM196A 82 1 - - - - - 1.000 - - - family with sequence similarity 196 member A
92. NAT14 ENSDARG00000115349 21 1 - - - - - 1.000 - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
93. SYNPO 2 1 - - - - - - - - 1.000 synaptopodin, transcript variant X2
94. clec3ba ENSDARG00000076541 3 1 - - - - - - - - 1.000 C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
95. CR318624.1 ENSDARG00000094618 5 1 - - - - - - - - 1.000
96. wdr27 ENSDARG00000053386 2 1 - - - - - - - - 1.000 WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
97. CMA1_8 CMA1_8 10 1 - - - - - 1.000 - - -
98. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1 - - - - - - - - 1.000 si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
99. GMEB2 ENSDARG00000093240 6 1 - - - - - 1.000 - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
100. s1pr4 ENSDARG00000074851 4 1 - - - 1.000 - - - - - sphingosine-1-phosphate receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050506-8]

There are 493 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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