Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HMGXB3

Gene Name Gene ID Reads Annotation
HMGXB3 ENSDARG00000077823 2 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]










Genes with expression patterns similar to HMGXB3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. HMGXB3 ENSDARG00000077823 2 4 - - - 1.000 - 1.000 - 1.000 1.000 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
2. FP103003.1_1 FP103003.1_1 6 2 - - - 1.000 - - - - 1.000
3. CR356223.1 ENSDARG00000093865 1 2 - - - - - 1.000 - - 1.000
4. CCDC18 ENSDARG00000078822 5 2 - - - 1.000 - - - - 1.000 coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
5. si:ch211-198e13.3 5 1.927 - - - - - 0.927 - - 1.000 si:ch211-198e13.3, transcript variant X1
6. ubb ENSDARG00000093313, ENSDARG00000112953 4 1.818 - - - 0.818 - - - - 1.000 ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]
7. pigf ENSDARG00000032780 7 1.818 - - - - - 1.000 - 0.818 - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
8. TMPRSS7 5 1.777 - - - - - 0.777 - - 1.000 transmembrane protease, serine 7
9. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 1.744 - - - 0.744 - 1.000 - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
10. chmp6b ENSDARG00000102024 37 1.664 - - - 0.733 - 0.931 - - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
11. clec3ba ENSDARG00000076541 3 1 - - - - - - - - 1.000 C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
12. si:dkey-165b20.3 ENSDARG00000099544 6 1 - - - - - - - 1.000 - si:dkey-165b20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-172]
13. foxi1 ENSDARG00000104566 176 1 - - - - - 1.000 - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
14. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - - - - - 1.000 si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
15. CABZ01080434.1 ENSDARG00000102438 4 1 - - - 1.000 - - - - -
16. slc47a2 2 1 - - - - - - - - 1.000 solute carrier family 47 (multidrug and toxin extrusion), member 2
17. CDK18 ENSDARG00000012204 5 1 - - - - - - - - 1.000 cyclin dependent kinase 18 [Source:HGNC Symbol;Acc:HGNC:8751]
18. si:ch1073-312b22.1 si:ch1073-312b22.1 6 1 - - - 1.000 - - - - -
19. prkacbb ENSDARG00000059125 7 1 - - - 1.000 - - - - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
20. si:dkey-40h20.1 ENSDARG00000095252 5 1 - - - 1.000 - - - - - si:dkey-40h20.1 [Source:ZFIN;Acc:ZDB-GENE-091113-44]
21. agtr1a ENSDARG00000018616 1 1 - - - - - - - - 1.000 angiotensin II receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070912-546]
22. CABZ01086544.1 CABZ01086544.1 0 1 - - - 1.000 - - - - -
23. BX294190.1 BX294190.1 17 1 - - - 1.000 - - - - -
24. VWA5A_1 VWA5A_1 6 1 - - - - - - - 1.000 -
25. si:dkey-4j21.1 17 1 - - - - - - - - 1.000 si:dkey-4j21.1, transcript variant X2
26. vcam1a ENSDARG00000078201 1 1 - - - - - - - - 1.000 vascular cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-172]
27. CR848836.1 ENSDARG00000097508 1 1 - - - 1.000 - - - - -
28. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - - - - 1.000 solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
29. zgc:162724 zgc:162724 9 1 - - - - - - - - 1.000
30. C17H8orf74 C17H8orf74 4 1 - - - - - - - - 1.000
31. CT030048.2 CT030048.2 3 1 - - - - - - - - 1.000
32. BX248582.3 BX248582.3 3 1 - - - 1.000 - - - - -
33. nkx3.3 ENSDARG00000069327, ENSDARG00000110589 66 1 - - - - - 1.000 - - - NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]
34. thbs4a ENSDARG00000102777 625 1 - - - - - 1.000 - - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
35. irak1 ENSDARG00000025949 19 1 - - - - - 1.000 - - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
36. LIX1 ENSDARG00000052154 9 1 - - - - - - - - 1.000 limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
37. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - - - 1.000
38. si:ch211-214p13.7 1 1 - - - - - - - - 1.000 si:ch211-214p13.7
39. itga2.1 ENSDARG00000069390 6 1 - - - - - 1.000 - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-111011-4]
40. TSPAN1 ENSDARG00000052027 4 1 - - - - - 1.000 - - - tetraspanin 1 [Source:ZFIN;Acc:ZDB-GENE-070502-5]
41. ZC2HC1C ENSDARG00000070526 14 1 - - - - - 1.000 - - - zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
42. large 9 1 - - - 1.000 - - - - - like-glycosyltransferase, transcript variant X1
43. si:dkey-100h21.2 si:dkey-100h21.2 30 1 - - - 1.000 - - - - -
44. si:dkey-274m14.3 si:dkey-274m14.3 7 1 - - - - - - - - 1.000
45. mybpc2a ENSDARG00000030157 11 1 - - - - - - - - 1.000 myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
46. NPM2 NPM2 41 1 - - - - - - - - 1.000
47. PDE6H 3 1 - - - - - - - - 1.000 phosphodiesterase 6H, cGMP-specific, cone, gamma, transcript variant 2
48. CABZ01073380.1 CABZ01073380.1 5 1 - - - - - - - 1.000 -
49. BX548067.1 ENSDARG00000103045 0 1 - - - - - - - 1.000 - si:dkey-261o4.8 [Source:NCBI gene;Acc:100537246]
50. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - - - - - - - 1.000 si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
51. CDR2_1 CDR2_1 8 1 - - - - - - - - 1.000
52. ttc6 ENSDARG00000104125 7 1 - - - - - - - - 1.000 tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
53. syt15 ENSDARG00000079926 8 1 - - - - - 1.000 - - - synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
54. men1_1 ENSDARG00000089456 3 1 - - - 1.000 - - - - - multiple endocrine neoplasia I [Source:ZFIN;Acc:ZDB-GENE-991110-12]
55. GMEB2 ENSDARG00000093240 6 1 - - - - - 1.000 - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
56. ptger2a ENSDARG00000011434 6 1 - - - - - - - - 1.000 prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
57. il12bb ENSDARG00000054542 6 1 - - - - - 1.000 - - - interleukin 12B, b [Source:ZFIN;Acc:ZDB-GENE-030131-7937]
58. scn1a 8 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
59. CU302316.1 ENSDARG00000109600 2 1 - - - - - - - - 1.000
60. si:dkey-179k24.6 si:dkey-179k24.6 5 1 - - - - - - - - 1.000
61. slc45a3 ENSDARG00000075975 1 1 - - - 1.000 - - - - - solute carrier family 45, member 3 [Source:ZFIN;Acc:ZDB-GENE-070509-3]
62. kcnh3 ENSDARG00000069560 4 1 - - - - - 1.000 - - - potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
63. si:ch211-117l17.4 ENSDARG00000103534 24 1 - - - - - 1.000 - - - si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
64. cyp2n13 ENSDARG00000042953 10 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
65. BX004880.2 BX004880.2 83 1 - - - - - 1.000 - - -
66. CABZ01030692.1 CABZ01030692.1 0 1 - - - - - - - - 1.000
67. si:ch211-254p10.2 ENSDARG00000056750 3 1 - - - - - - - - 1.000 si:ch211-254p10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-17]
68. si:dkey-270b7.4 si:dkey-270b7.4 11 1 - - - - - - - 1.000 -
69. si:dkey-112e17.1 ENSDARG00000093201 1 1 - - - - - 1.000 - - - si:dkey-112e17.1 [Source:ZFIN;Acc:ZDB-GENE-060526-193]
70. CR318624.1 ENSDARG00000094618 5 1 - - - - - - - - 1.000
71. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - - - - 1.000 si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
72. si:dkey-149m13.2 si:dkey-149m13.2 1 1 - - - - - - - - 1.000
73. CT573356.3 CT573356.3 2 1 - - - - - 1.000 - - -
74. slc15a1b ENSDARG00000044528 6 1 - - - - - - - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
75. htr5al htr5al 6 1 - - - - - - - - 1.000
76. uts1 ENSDARG00000014927 35 1 - - - - - 1.000 - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
77. si:ch1073-109g21.1 si:ch1073-109g21.1 0 1 - - - - - - - - 1.000
78. olfcg2 ENSDARG00000101083 8 1 - - - - - 1.000 - - - olfactory receptor C family, g2 [Source:ZFIN;Acc:ZDB-GENE-060503-253]
79. si:dkey-3p4.4 si:dkey-3p4.4 2 1 - - - - - - - 1.000 -
80. cdc14aa ENSDARG00000013858 18 1 - - - - - - - - 1.000 cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
81. cldn10l2 ENSDARG00000105042 11 1 - - - - - 1.000 - - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
82. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
83. snR50 snR50 1 1 - - - - - 1.000 - - -
84. crp6 ENSDARG00000071457 2 1 - - - 1.000 - - - - - C-reactive protein 6 [Source:ZFIN;Acc:ZDB-GENE-060503-881]
85. CT737184.1 ENSDARG00000102726 0 1 - - - - - - - - 1.000
86. ftr58 ENSDARG00000071238 10 1 - - - - - 1.000 - - - finTRIM family, member 58 [Source:ZFIN;Acc:ZDB-GENE-080219-44]
87. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
88. CABZ01074669.1 CABZ01074669.1 12 1 - - - - - - - - 1.000
89. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - - - - - - 1.000
90. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
91. MEI1 MEI1 2 1 - - - - - - - - 1.000
92. tbl2 ENSDARG00000043357 125 1 - - - - - 1.000 - - - transducin (beta)-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9012]
93. SLCO2B1 ENSDARG00000054609 0 1 - - - - - - - - 1.000 solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
94. zgc:92161 ENSDARG00000101749 27 1 - - - - - - - - 1.000 zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
95. slc6a4b ENSDARG00000057017 18 1 - - - 1.000 - - - - - solute carrier family 6 (neurotransmitter transporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-060314-2]
96. KIAA0319 KIAA0319 2 1 - - - - - - - - 1.000
97. fam166b ENSDARG00000100292 14 1 - - - - - 1.000 - - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
98. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
99. NINJ1 ENSDARG00000103663 43 1 - - - - - 1.000 - - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
100. CR774179.1 ENSDARG00000086969 3 1 - - - - - - - - 1.000

There are 493 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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