Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HMGN3

Gene Name Gene ID Reads Annotation
HMGN3 ENSGALG00000015880 30919 high mobility group nucleosomal binding domain 3 [Source:NCBI gene;Acc:421853]











Genes with expression patterns similar to HMGN3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HMGN3 ENSGALG00000015880 30919 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 high mobility group nucleosomal binding domain 3 [Source:NCBI gene;Acc:421853]
2. ATPAF1 ENSGALG00000010444 3677 2.232 - - - - 0.764 - 0.721 0.747 - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
3. HMGN1 ENSGALG00000016067 17375 1.594 - - - - 0.783 - 0.811 - - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
4. PPP1CC ENSGALG00000004571 14748 1.592 - - - - - - 0.846 0.746 - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
5. TPMT ENSGALG00000012687 9537 1.586 - - - - 0.764 - 0.822 - - - thiopurine S-methyltransferase [Source:HGNC Symbol;Acc:HGNC:12014]
6. SVIL ENSGALG00000007331 12032 1.522 - - - - - - 0.794 0.728 - - supervillin [Source:HGNC Symbol;Acc:HGNC:11480]
7. IGF2BP2 ENSGALG00000033195 11421 1.497 - - - - 0.756 - 0.741 - - - insulin like growth factor 2 mRNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28867]
8. GTF2H3 ENSGALG00000023682 9914 1.491 - - - - 0.778 - 0.713 - - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
9. CYB5B ENSGALG00000000660 9733 1.484 - - - - - - 0.761 0.723 - - cytochrome b5 type B [Source:NCBI gene;Acc:415865]
10. PPIH ENSGALG00000004874 25558 1.466 - - - - 0.757 - 0.709 - - - peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
11. TTC37 ENSGALG00000014670 5715 1.458 - - - - 0.717 - 0.741 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
12. BRMS1L ENSGALG00000010093 4964 1.453 - - - - 0.727 - - 0.726 - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
13. TMX4 ENSGALG00000028587 3513 1.449 - - - - 0.709 - 0.740 - - - thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
14. DAP3 ENSGALG00000019796 13278 1.444 - - - - 0.703 - 0.741 - - - death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
15. KPNA1 ENSGALG00000014426 2724 1.436 - - - - - - 0.709 0.727 - - karyopherin subunit alpha 1 [Source:NCBI gene;Acc:418271]
16. DPYSL2 ENSGALG00000000227 9668 0.905 - - - - - - - 0.905 - - dihydropyrimidinase like 2 [Source:NCBI gene;Acc:395155]
17. Mar-05 Mar-05 6330 0.883 - - - - - - 0.883 - - -
18. XBP1 ENSGALG00000005796 14007 0.881 - - - - - - 0.881 - - - X-box binding protein 1 [Source:NCBI gene;Acc:416918]
19. SSBP1 ENSGALG00000012876 34256 0.876 - - - - - - 0.876 - - - single stranded DNA binding protein 1 [Source:NCBI gene;Acc:418122]
20. N6AMT2 N6AMT2 4703 0.872 - - - - - - - 0.872 - -
21. PTTG1 17936 0.871 - - - - - - 0.871 - - - pituitary tumor-transforming 1, transcript variant X1
22. SOD1 ENSGALG00000015844 35836 0.87 - - - - - - 0.870 - - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
23. DEK ENSGALG00000012684 14179 0.87 - - - - - - 0.870 - - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
24. ENSGALG00000016887 ENSGALG00000016887 20086 0.869 - - - - - - 0.869 - - -
25. MRPL38 ENSGALG00000002194 6648 0.867 - - - - - - - 0.867 - - mitochondrial ribosomal protein L38 [Source:NCBI gene;Acc:770172]
26. DCAF7 ENSGALG00000000510 8681 0.862 - - - - - - 0.862 - - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
27. ID1 ENSGALG00000034661 44524 0.86 - - - - - - - 0.860 - - inhibitor of DNA binding 1, HLH protein [Source:NCBI gene;Acc:395282]
28. SECISBP2 ENSGALG00000010694 6990 0.857 - - - - - - 0.857 - - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
29. ENSGALG00000007509 ENSGALG00000007509 18441 0.851 - - - - 0.851 - - - - -
30. NDUFC2 ENSGALG00000029172 26136 0.851 - - - - - - 0.851 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
31. R3HDM1 ENSGALG00000012246 6580 0.847 - - - - - - 0.847 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
32. NOP58 ENSGALG00000008454 34630 0.846 - - - - - - 0.846 - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
33. KIAA0020 KIAA0020 14353 0.846 - - - - - - 0.846 - - -
34. EIF3B ENSGALG00000040999 49971 0.845 - - - - - - 0.845 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
35. BRD7 ENSGALG00000003786 26858 0.842 - - - - - - 0.842 - - - bromodomain containing 7 [Source:NCBI gene;Acc:415730]
36. TXN2 ENSGALG00000012532 12518 0.841 - - - - - - 0.841 - - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
37. STAG2 ENSGALG00000008482 13629 0.841 - - - - - - - - - 0.841 stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
38. NDUFAF2 ENSGALG00000027564 7302 0.839 - - - - 0.839 - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
39. MCFD2 ENSGALG00000010017 8905 0.839 - - - - - - 0.839 - - - multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
40. COMMD1 ENSGALG00000008931 12202 0.839 - - - - - - 0.839 - - - copper metabolism domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23024]
41. PAX1 ENSGALG00000039040 3339 0.837 - - - - - - - 0.837 - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
42. DLD ENSGALG00000007931 11011 0.836 - - - - - - 0.836 - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
43. RABIF ENSGALG00000000436 6449 0.836 - - - - - - 0.836 - - - RAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]
44. PDCD10 ENSGALG00000009477 7061 0.835 - - - - - - 0.835 - - - programmed cell death 10 [Source:NCBI gene;Acc:425003]
45. DAD1 ENSGALG00000035626 32604 0.835 - - - - - - 0.835 - - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
46. TFDP1 ENSGALG00000016823 17019 0.835 - - - - - - 0.835 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
47. NDUFS7 ENSGALG00000009703 19674 0.832 - - - - - - 0.832 - - - NADH:ubiquinone oxidoreductase core subunit S7 [Source:HGNC Symbol;Acc:HGNC:7714]
48. MRPL40 ENSGALG00000001587 20893 0.832 - - - - - - 0.832 - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
49. ADH5 ENSGALG00000012245 38217 0.832 - - - - 0.832 - - - - - alcohol dehydrogenase 5 (class III), chi polypeptide [Source:NCBI gene;Acc:422705]
50. DYNLL1 ENSGALG00000020999 7751 0.831 - - - - - - 0.831 - - - dynein light chain LC8-type 1 [Source:HGNC Symbol;Acc:HGNC:15476]
51. TM9SF2L ENSGALG00000006487 5566 0.831 - - - - - - 0.831 - - - transmembrane 9 superfamily member 2-like [Source:NCBI gene;Acc:422249]
52. EIF2S1 ENSGALG00000009565 63906 0.831 - - - - - - 0.831 - - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
53. MMD ENSGALG00000003078 21311 0.831 - - - - - - 0.831 - - - monocyte to macrophage differentiation associated [Source:NCBI gene;Acc:417397]
54. MAK16 ENSGALG00000001663 7455 0.831 - - - - - - 0.831 - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
55. GSTK1 ENSGALG00000014708 4687 0.83 - - - - - - 0.830 - - - glutathione S-transferase kappa 1 [Source:NCBI gene;Acc:418302]
56. GMPPB ENSGALG00000002500 9454 0.83 - - - - - - 0.830 - - - GDP-mannose pyrophosphorylase B [Source:NCBI gene;Acc:415924]
57. TXNDC17 ENSGALG00000027950 45004 0.828 - - - - - - 0.828 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
58. SYAP1 ENSGALG00000016548 3347 0.828 - - - - - - 0.828 - - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
59. TMEM167A ENSGALG00000027332 13862 0.828 - - - - - - 0.828 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
60. PDIA4 ENSGALG00000043006 22992 0.827 - - - - - - 0.827 - - - protein disulfide isomerase family A member 4 [Source:NCBI gene;Acc:420785]
61. ELK3 ENSGALG00000043701 7881 0.824 - - - - - - 0.824 - - - ELK3, ETS transcription factor [Source:NCBI gene;Acc:417919]
62. SUCLG2 ENSGALG00000007652 9688 0.823 - - - - - - 0.823 - - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
63. SDHD ENSGALG00000007878 25129 0.822 - - - - - - 0.822 - - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
64. MRPL39 ENSGALG00000015742 7025 0.821 - - - - - - 0.821 - - - mitochondrial ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:14027]
65. PSMB4 ENSGALG00000000905 46735 0.821 - - - - - - 0.821 - - - proteasome subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:9541]
66. NDUFB3 ENSGALG00000008239 15511 0.821 - - - - - - 0.821 - - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
67. DYNLT1 ENSGALG00000019979 38176 0.821 - - - - - - 0.821 - - - dynein light chain Tctex-type 1 [Source:HGNC Symbol;Acc:HGNC:11697]
68. THRAP3 ENSGALG00000002144 21958 0.819 - - - - - - 0.819 - - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
69. FAM63B 3793 0.818 - - - - - - 0.818 - - - family with sequence similarity 63 member B
70. SRI ENSGALG00000008985 13865 0.818 - - - - - - 0.818 - - - sorcin [Source:NCBI gene;Acc:420538]
71. ZFR ENSGALG00000003235 8466 0.818 - - - - 0.818 - - - - - zinc finger RNA binding protein, transcript variant X3
72. CLINT1 ENSGALG00000003702 11269 0.817 - - - - - - 0.817 - - - clathrin interactor 1 [Source:NCBI gene;Acc:416240]
73. ENSGALG00000009044 ENSGALG00000009044 14492 0.816 - - - - - - 0.816 - - -
74. SLC30A5 ENSGALG00000014787 5573 0.813 - - - - - - 0.813 - - - solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
75. OCIAD1 ENSGALG00000014081 12065 0.811 - - - - - - 0.811 - - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
76. FKBP12 FKBP12 64317 0.811 - - - - - - 0.811 - - -
77. DGUOK ENSGALG00000005961 5929 0.81 - - - - - - 0.810 - - - deoxyguanosine kinase [Source:NCBI gene;Acc:770922]
78. C4H4ORF52 C4H4ORF52 8116 0.81 - - - - - - 0.810 - - -
79. OSTC ENSGALG00000010526 19422 0.809 - - - - - - 0.809 - - - oligosaccharyltransferase complex non-catalytic subunit [Source:NCBI gene;Acc:422525]
80. DKC1 ENSGALG00000005054 30350 0.809 - - - - - - 0.809 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
81. DBI ENSGALG00000012112 6910 0.808 - - - - 0.808 - - - - - diazepam binding inhibitor, acyl-CoA binding protein [Source:NCBI gene;Acc:395263]
82. SNRNP40 ENSGALG00000000615 32298 0.808 - - - - - - 0.808 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
83. MCM3AP ENSGALG00000004363 3247 0.807 - - - - - - 0.807 - - - minichromosome maintenance complex component 3 associated protein [Source:HGNC Symbol;Acc:HGNC:6946]
84. SEC24C ENSGALG00000005181 11132 0.807 - - - - - - 0.807 - - - SEC24 homolog C, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10705]
85. NR2C1 ENSGALG00000011327 5109 0.806 - - - - - - 0.806 - - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
86. LAPTM4A ENSGALG00000016479 15973 0.806 - - - - - - 0.806 - - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
87. MORF4L1 ENSGALG00000008146 29940 0.805 - - - - - - 0.805 - - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
88. WDR51B WDR51B 5757 0.805 - - - - - - 0.805 - - -
89. SEC11A ENSGALG00000037553 32123 0.804 - - - - - - 0.804 - - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
90. WBSCR27 3511 0.804 - - - - - - 0.804 - - - Williams Beuren syndrome chromosome region 27
91. CLNS1A ENSGALG00000008574 25675 0.804 - - - - - - 0.804 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
92. CSE1L ENSGALG00000004707 20653 0.803 - - - - - - 0.803 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
93. RMI1 ENSGALG00000012592 3750 0.803 - - - - - - 0.803 - - - RecQ mediated genome instability 1 [Source:NCBI gene;Acc:431669]
94. DCUN1D1 ENSGALG00000008807 6545 0.802 - - - - - - 0.802 - - - defective in cullin neddylation 1 domain containing 1 [Source:NCBI gene;Acc:424963]
95. MARK3 ENSGALG00000011505 14846 0.8 - - - - 0.800 - - - - - microtubule affinity regulating kinase 3 [Source:HGNC Symbol;Acc:HGNC:6897]
96. PSMB7 ENSGALG00000001103 42683 0.799 - - - - - - 0.799 - - - proteasome subunit beta 7 [Source:NCBI gene;Acc:378915]
97. CHTF8 ENSGALG00000000632 7230 0.798 - - - - - - 0.798 - - - chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
98. TNFAIP1 ENSGALG00000005715 3347 0.798 - - - - - - 0.798 - - - TNF alpha induced protein 1 [Source:NCBI gene;Acc:417672]
99. TRAP1 ENSGALG00000039951 11323 0.798 - - - - 0.798 - - - - - TNF receptor associated protein 1 [Source:NCBI gene;Acc:416666]
100. PREP ENSGALG00000015405 17050 0.798 - - - - - - 0.798 - - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]

There are 601 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA