Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for HMGN1

Gene Name Gene ID Reads Annotation
HMGN1 ENSGALG00000016067 17375 high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]











Genes with expression patterns similar to HMGN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HMGN1 ENSGALG00000016067 17375 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
2. TPMT ENSGALG00000012687 9537 2.644 - - - - 0.932 - 0.839 0.873 - - thiopurine S-methyltransferase [Source:HGNC Symbol;Acc:HGNC:12014]
3. PPP1R7 ENSGALG00000031766 22187 2.573 - - - - 0.859 - 0.815 0.899 - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
4. OGFOD3 ENSGALG00000001618 2438 1.827 - - - - 0.975 - - 0.852 - - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
5. DHX33 ENSGALG00000001630 7783 1.816 - - - - 0.963 - 0.853 - - - DEAH-box helicase 33 [Source:HGNC Symbol;Acc:HGNC:16718]
6. TIMM10 ENSGALG00000004845 31395 1.798 - - - - 0.949 - - 0.849 - - translocase of inner mitochondrial membrane 10 [Source:NCBI gene;Acc:425202]
7. ARF6 ENSGALG00000026944 22014 1.753 - - - - 0.882 - - 0.871 - - ADP ribosylation factor 6 [Source:NCBI gene;Acc:428927]
8. CRCP ENSGALG00000002587 8809 1.743 - - 0.769 - 0.974 - - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
9. GTF2H3 ENSGALG00000023682 9914 1.742 - - 0.768 - 0.974 - - - - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
10. SERINC1 ENSGALG00000014868 12484 1.742 - - - - 0.908 - 0.834 - - - serine incorporator 1 [Source:NCBI gene;Acc:421722]
11. COQ3 ENSGALG00000015486 3508 1.728 - - 0.755 - 0.973 - - - - - coenzyme Q3, methyltransferase [Source:HGNC Symbol;Acc:HGNC:18175]
12. PWP1 ENSGALG00000012631 10536 1.725 - - - - 0.950 - 0.775 - - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
13. NUPL1 NUPL1 8197 1.722 - - 0.794 - 0.928 - - - - -
14. SEC22B ENSGALG00000039704 16080 1.716 - - 0.781 - 0.935 - - - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
15. LARP7 ENSGALG00000012048 8393 1.711 - - 0.760 - 0.951 - - - - - La ribonucleoprotein domain family member 7 [Source:HGNC Symbol;Acc:HGNC:24912]
16. UBE2E3 ENSGALG00000020793 9517 1.71 - - 0.783 - 0.927 - - - - - ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
17. ZCCHC8 ENSGALG00000004486 3201 1.698 - - 0.842 - - - 0.856 - - - zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
18. FZD6 ENSGALG00000030626 3336 1.688 - - 0.713 - 0.975 - - - - - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
19. LPCAT3 ENSGALG00000014570 7919 1.687 - - 0.857 - - - 0.830 - - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
20. IFT81 ENSGALG00000003854 2534 1.684 - - 0.900 - - - 0.784 - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
21. NCAPD2 ENSGALG00000039448 8658 1.682 - - 0.812 - - - - 0.870 - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
22. ADIPOR2 ENSGALG00000035533 6523 1.67 - - 0.892 - - - 0.778 - - - adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
23. ELOVL5 ENSGALG00000016314 18163 1.664 - - 0.865 - - - 0.799 - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
24. AIMP1 ENSGALG00000010553 17994 1.647 - - 0.702 - 0.945 - - - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
25. TTPAL ENSGALG00000004244 2734 1.639 - - 0.921 - - - - - 0.718 - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
26. TXN2 ENSGALG00000012532 12518 1.621 - - 0.784 - - - 0.837 - - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
27. MMD ENSGALG00000003078 21311 1.619 - - - - 0.738 - 0.881 - - - monocyte to macrophage differentiation associated [Source:NCBI gene;Acc:417397]
28. CALSYNTENIN-1 CALSYNTENIN-1 11195 1.599 - - 0.814 - - - 0.785 - - -
29. CEPT1 ENSGALG00000000142 4219 1.598 - - 0.808 - - - 0.790 - - - choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
30. PPIH ENSGALG00000004874 25558 1.595 - - - - 0.790 - 0.805 - - - peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
31. HMGN3 ENSGALG00000015880 30919 1.594 - - - - 0.783 - 0.811 - - - high mobility group nucleosomal binding domain 3 [Source:NCBI gene;Acc:421853]
32. GTF2H5 ENSGALG00000013733 12293 1.586 - - 0.808 - - - 0.778 - - - general transcription factor IIH subunit 5 [Source:NCBI gene;Acc:769754]
33. PSMB4 ENSGALG00000000905 46735 1.585 - - - - - - 0.843 0.742 - - proteasome subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:9541]
34. RALB ENSGALG00000026493 14590 1.584 - - - - - - 0.825 0.759 - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
35. POLR2K ENSGALG00000036019 8962 1.58 - - - - 0.800 - 0.780 - - - RNA polymerase II subunit K [Source:HGNC Symbol;Acc:HGNC:9198]
36. TAF1B ENSGALG00000016437 2318 1.569 - - 0.845 - - - 0.724 - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
37. URI1 ENSGALG00000004506 6024 1.566 - - 0.702 - - - - 0.864 - - URI1, prefoldin like chaperone [Source:HGNC Symbol;Acc:HGNC:13236]
38. TOP1 ENSGALG00000003681 30214 1.56 - - - - 0.792 - - 0.768 - - DNA topoisomerase I [Source:NCBI gene;Acc:396004]
39. VMA21 ENSGALG00000009065 6432 1.56 - - 0.717 - - - - 0.843 - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
40. MFF ENSGALG00000003079 5289 1.555 - - 0.739 - - - 0.816 - - - mitochondrial fission factor [Source:HGNC Symbol;Acc:HGNC:24858]
41. FOXK2 ENSGALG00000001577 6346 1.553 - - 0.723 - - - 0.830 - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
42. DDX42 ENSGALG00000000581 8780 1.552 - - 0.782 - - - 0.770 - - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
43. BRE 10440 1.547 - - 0.840 - - - 0.707 - - - brain and reproductive organ-expressed (TNFRSF1A modulator), transcript variant X2
44. PDPK1 ENSGALG00000006418 13412 1.544 - - 0.772 - - - 0.772 - - - 3-phosphoinositide dependent protein kinase 1 [Source:NCBI gene;Acc:416588]
45. NDUFC2 ENSGALG00000029172 26136 1.541 - - 0.767 - - - - 0.774 - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
46. TAF5 ENSGALG00000008241 5227 1.528 - - 0.723 - - - 0.805 - - - TATA-box binding protein associated factor 5 [Source:NCBI gene;Acc:423872]
47. QSER1 ENSGALG00000012030 4490 1.52 - - 0.771 - - - 0.749 - - - glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
48. C17orf75 ENSGALG00000003434 4262 1.507 - - 0.789 - - - 0.718 - - - chromosome 17 open reading frame 75 [Source:HGNC Symbol;Acc:HGNC:30173]
49. FKBP12 FKBP12 64317 1.502 - - - - 0.750 - 0.752 - - -
50. RHOGL ENSGALG00000005464, ENSGALG00000005475 5791 1.501 - - 0.708 - - - 0.793 - - - rho-related GTP-binding protein RhoG-like [Source:NCBI gene;Acc:422207]
51. VAPB ENSGALG00000007549 15511 1.456 - - 0.732 - - - 0.724 - - - VAMP associated protein B and C [Source:NCBI gene;Acc:419317]
52. RPL12 ENSGALG00000008806 229862 1.456 - - - - 0.722 - 0.734 - - - ribosomal protein L12 [Source:NCBI gene;Acc:417264]
53. ARPP21 ENSGALG00000043240 2403 0.986 - - - - 0.986 - - - - - cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]
54. SLC9A3R2 ENSGALG00000005608 4220 0.985 - - - - 0.985 - - - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
55. ATPAF1 ENSGALG00000010444 3677 0.983 - - - - 0.983 - - - - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
56. DAP3 ENSGALG00000019796 13278 0.978 - - - - 0.978 - - - - - death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
57. IL4RA IL4RA 1237 0.977 - - - - 0.977 - - - - -
58. ROR2 ENSGALG00000015208 1323 0.977 - - - - 0.977 - - - - - receptor tyrosine kinase like orphan receptor 2 [Source:NCBI gene;Acc:769516]
59. POLR1B ENSGALG00000032273 3845 0.977 - - - - 0.977 - - - - - RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
60. LOC770492 ENSGALG00000027778 695 0.976 - - - - 0.976 - - - - - ras-related and estrogen-regulated growth inhibitor-like
61. TCERG1L ENSGALG00000010470 490 0.976 - - - - 0.976 - - - - - transcription elongation regulator 1 like [Source:HGNC Symbol;Acc:HGNC:23533]
62. DPCD ENSGALG00000007731 7225 0.976 - - - - 0.976 - - - - - deleted in primary ciliary dyskinesia homolog (mouse) [Source:NCBI gene;Acc:423852]
63. ZNF318 ENSGALG00000034040 1758 0.976 - - - - 0.976 - - - - - zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
64. DRD2 ENSGALG00000007794 399 0.976 - - - - 0.976 - - - - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
65. FANCM ENSGALG00000031182 1030 0.976 - - - - 0.976 - - - - - FA complementation group M [Source:HGNC Symbol;Acc:HGNC:23168]
66. RAB23 ENSGALG00000016279 597 0.976 - - - - 0.976 - - - - - ras-related protein Rab-23 [Source:NCBI gene;Acc:421879]
67. Sep-11 Sep-11 2005 0.975 - - - - 0.975 - - - - -
68. ERICH1 ENSGALG00000031021 1495 0.975 - - - - 0.975 - - - - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
69. TEL TEL 1231 0.975 - - - - 0.975 - - - - -
70. ADPGK ENSGALG00000001788 208 0.975 - - - - 0.975 - - - - - ADP dependent glucokinase [Source:NCBI gene;Acc:415317]
71. AP1S3 ENSGALG00000005171 2981 0.975 - - - - 0.975 - - - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
72. KLF3 ENSGALG00000041717 2787 0.975 - - - - 0.975 - - - - - Kruppel like factor 3 [Source:HGNC Symbol;Acc:HGNC:16516]
73. REXO5 ENSGALG00000002239 2466 0.974 - - - - 0.974 - - - - - RNA exonuclease 5 [Source:NCBI gene;Acc:427001]
74. PRKCD ENSGALG00000002016 1476 0.974 - - - - 0.974 - - - - - protein kinase C delta [Source:NCBI gene;Acc:415905]
75. ALDH18A1 ENSGALG00000034655 3038 0.974 - - - - 0.974 - - - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
76. DNAJA1 ENSGALG00000023066 3820 0.974 - - - - 0.974 - - - - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
77. CALCA CALCA 682 0.973 - - - - 0.973 - - - - -
78. ZBTB8OS ENSGALG00000003517 2436 0.973 - - - - 0.973 - - - - - zinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:HGNC:24094]
79. IFT172 ENSGALG00000016509 1226 0.973 - - - - 0.973 - - - - - intraflagellar transport 172 [Source:HGNC Symbol;Acc:HGNC:30391]
80. TMEM203 ENSGALG00000008925 3033 0.973 - - - - 0.973 - - - - - transmembrane protein 203 [Source:HGNC Symbol;Acc:HGNC:28217]
81. SLC25A15 ENSGALG00000017032 6773 0.973 - - - - 0.973 - - - - - solute carrier family 25 member 15 [Source:NCBI gene;Acc:418886]
82. BBS2 ENSGALG00000042415 1816 0.973 - - - - 0.973 - - - - - Bardet-Biedl syndrome 2 [Source:NCBI gene;Acc:415694]
83. DLGAP5 ENSGALG00000012165 2406 0.972 - - - - 0.972 - - - - - DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]
84. CGT CGT 948 0.972 - - - - 0.972 - - - - -
85. NQO2 ENSGALG00000025747 2287 0.971 - - - - 0.971 - - - - - N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
86. VCPKMT ENSGALG00000012269 2107 0.971 - - - - 0.971 - - - - - valosin containing protein lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:20352]
87. METTL25 1538 0.971 - - - - 0.971 - - - - - methyltransferase like 25, transcript variant X1
88. TMEM97 ENSGALG00000005702 2037 0.971 - - - - 0.971 - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
89. RNF207 2949 0.97 - - - - 0.970 - - - - - ring finger protein 207, transcript variant X1
90. C1H21ORF33 ENSGALG00000019171 8910 0.97 - - - - 0.970 - - - - - chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
91. ZZZ3 ENSGALG00000008988 3132 0.969 - - - - 0.969 - - - - - zinc finger ZZ-type containing 3, transcript variant X5
92. TMEM184C ENSGALG00000010019 7856 0.969 - - - - 0.969 - - - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
93. THOC1 ENSGALG00000014915 5846 0.969 - - - - 0.969 - - - - - Gallus gallus THO complex 1 (THOC1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001321610]
94. RASA2 ENSGALG00000002850 2231 0.969 - - - - 0.969 - - - - - RAS p21 protein activator 2 [Source:NCBI gene;Acc:424782]
95. MICALL1 ENSGALG00000012265 3753 0.968 - - - - 0.968 - - - - - MICAL like 1 [Source:NCBI gene;Acc:418032]
96. ITPA ENSGALG00000003250 7722 0.968 - - - - 0.968 - - - - - inosine triphosphatase [Source:NCBI gene;Acc:424390]
97. SMC6 ENSGALG00000016467 3321 0.968 - - - - 0.968 - - - - - Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
98. CTSL2 CTSL2 7966 0.968 - - - - 0.968 - - - - -
99. PEX2 ENSGALG00000035752 4427 0.967 - - - - 0.967 - - - - - peroxisomal biogenesis factor 2 [Source:NCBI gene;Acc:420192]
100. EXOSC3 ENSGALG00000002426 7255 0.967 - - - - 0.967 - - - - - exosome component 3 [Source:NCBI gene;Acc:423626]

There are 837 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA