Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HMGCS1

Gene Name Gene ID Reads Annotation
HMGCS1 ENSGALG00000014862 2846 3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:NCBI gene;Acc:396379]











Genes with expression patterns similar to HMGCS1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HMGCS1 ENSGALG00000014862 2846 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:NCBI gene;Acc:396379]
2. RTN1 ENSGALG00000012006 2438 1.635 - - - - - - - - 0.905 0.730 reticulon 1 [Source:NCBI gene;Acc:378791]
3. NSG1 ENSGALG00000015010 5829 1.626 - - - - - - - 0.765 0.861 - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
4. INA ENSGALG00000028238 208 1.599 - - - - - - - - 0.885 0.714 internexin neuronal intermediate filament protein alpha
5. MYT1 ENSGALG00000005932 2017 1.537 - - - - - - - - 0.827 0.710 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
6. NEFL ENSGALG00000000314 4883 1.534 - - - - - - - - 0.807 0.727 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
7. CBWD1 ENSGALG00000010147 2765 1.498 - - - - - - 0.753 0.745 - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
8. SNAP25 ENSGALG00000009003 222 1.481 - - - - - - - - 0.732 0.749 synaptosome associated protein 25 [Source:NCBI gene;Acc:396444]
9. GRM3 ENSGALG00000006576 474 1.476 - - - - - - - - 0.744 0.732 glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
10. STMN2 ENSGALG00000039690 989 1.475 - - - - - - - - 0.746 0.729 stathmin 2 [Source:NCBI gene;Acc:396095]
11. SLC10A4 ENSGALG00000033908 300 1.473 - - - - - - - - 0.730 0.743 solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
12. MNX1 ENSGALG00000041154 244 1.472 - - - - - - - - 0.713 0.759 motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
13. TUBB2C TUBB2C 44249 1.465 - - - - - - 0.709 - 0.756 -
14. JMJD6 ENSGALG00000001802 5169 1.434 - - - - - - 0.726 - 0.708 - jumonji domain containing 6 [Source:NCBI gene;Acc:417355]
15. SYT4 ENSGALG00000042626 384 0.932 - - - - - - - - 0.932 - synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
16. TUBB2B ENSGALG00000012821 41535 0.908 - - - - - - - - 0.908 - tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
17. UCH-L1 UCH-L1 12697 0.889 - - - - - - - - 0.889 -
18. GPM6A ENSGALG00000043480 2133 0.884 - - - - - - - - 0.884 - glycoprotein M6A [Source:NCBI gene;Acc:422569]
19. DPYSL4 ENSGALG00000010490 3431 0.883 - - - - - - - - 0.883 - dihydropyrimidinase like 4 [Source:HGNC Symbol;Acc:HGNC:3016]
20. EF1A EF1A 2378 0.881 - - - - - - - - 0.881 -
21. HOXA7 ENSGALG00000026989 6746 0.88 - - - - - - - - 0.880 - homeobox A7 [Source:NCBI gene;Acc:395290]
22. RUSC2 ENSGALG00000002371 272 0.876 - - - - - - - - 0.876 - RUN and SH3 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23625]
23. PIK3IP1 ENSGALG00000006942 8388 0.858 - - - - - - 0.858 - - - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
24. NFASC ENSGALG00000031776 4264 0.847 - - - - - - - - 0.847 - neurofascin [Source:NCBI gene;Acc:419824]
25. ISL1 ENSGALG00000014884 7666 0.847 - - - - - - - - 0.847 - ISL LIM homeobox 1 [Source:NCBI gene;Acc:396383]
26. BAI1 BAI1 235 0.84 - - - - - - - - 0.840 -
27. STMN3 ENSGALG00000006130 151 0.838 - - - - - - - - 0.838 - stathmin 3 [Source:NCBI gene;Acc:419263]
28. NTM ENSGALG00000001437 584 0.837 - - - - - - - - 0.837 - neurotrimin [Source:NCBI gene;Acc:395450]
29. MAP2 ENSGALG00000002789 6597 0.834 - - - - - - - - 0.834 - microtubule associated protein 2, transcript variant X33
30. SIAT8C SIAT8C 178 0.833 - - - - - - - - 0.833 -
31. NCAPD2 ENSGALG00000039448 8658 0.83 - - - - - - 0.830 - - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
32. MARCKSL1 ENSGALG00000032335 88728 0.83 - - - - - - - - 0.830 - MARCKS like 1 [Source:NCBI gene;Acc:770764]
33. GDI2 ENSGALG00000008169 67151 0.83 - - - - - - - - 0.830 - GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
34. GABRA3 ENSGALG00000007269 985 0.83 - - - - - - - - 0.830 - gamma-aminobutyric acid type A receptor alpha3 subunit [Source:HGNC Symbol;Acc:HGNC:4077]
35. C1QBP ENSGALG00000001654 34814 0.829 - - - - - - 0.829 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
36. NHLH1 ENSGALG00000025817 1617 0.825 - - - - - - - - 0.825 - nescient helix-loop-helix 1 [Source:NCBI gene;Acc:373910]
37. TMEM70 ENSGALG00000033568 10720 0.824 - - - - - - 0.824 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
38. LRRN2 ENSGALG00000000639 73 0.822 - - - - - - - - 0.822 - leucine rich repeat neuronal 2 [Source:HGNC Symbol;Acc:HGNC:16914]
39. SLC5A7 ENSGALG00000016804 93 0.818 - - - - - - - - 0.818 - solute carrier family 5 member 7 [Source:NCBI gene;Acc:414870]
40. C19H17ORF85 C19H17ORF85 2538 0.818 - - - - - - - 0.818 - -
41. CRMP1B CRMP1B 18633 0.815 - - - - - - - - 0.815 -
42. GAP43 ENSGALG00000015089 505 0.815 - - - - - - - - 0.815 - growth associated protein 43 [Source:NCBI gene;Acc:427955]
43. ASTN1 ENSGALG00000004472 855 0.814 - - - - - - - - 0.814 - astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
44. LGR4 ENSGALG00000040834 5529 0.813 - - - - - - 0.813 - - - leucine rich repeat containing G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:13299]
45. AP2A2 ENSGALG00000006799 13874 0.812 - - - - - - 0.812 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
46. HERC2 ENSGALG00000016739 9900 0.81 - - - - - - 0.810 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
47. ELAVL4 ENSGALG00000010533 4978 0.81 - - - - - - - - 0.810 - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
48. NOC4L ENSGALG00000002272 9644 0.809 - - - - - - 0.809 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
49. ILF2 ENSGALG00000011570 23050 0.809 - - - - - - 0.809 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
50. CHMP6 ENSGALG00000026428 18026 0.806 - - - - - - 0.806 - - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
51. ARHGAP11A ENSGALG00000009731 6817 0.806 - - - - - - 0.806 - - - Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
52. BAG5 ENSGALG00000031062 4498 0.806 - - - - - - 0.806 - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
53. TBC1D30 ENSGALG00000009859 994 0.806 - - - - - - - - 0.806 - TBC1 domain family member 30 [Source:HGNC Symbol;Acc:HGNC:29164]
54. MED19 ENSGALG00000007341 4913 0.804 - - - - - - 0.804 - - - mediator complex subunit 19 [Source:HGNC Symbol;Acc:HGNC:29600]
55. BNIP3L ENSGALG00000043405 10316 0.803 - - - - - - 0.803 - - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
56. DDX19B ENSGALG00000039967 49600 0.803 - - - - - - 0.803 - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
57. ELOVL4 ENSGALG00000015876 853 0.803 - - - - - - - - 0.803 - ELOVL fatty acid elongase 4 [Source:NCBI gene;Acc:421850]
58. ANKHD1 ENSGALG00000001099 10103 0.802 - - - - - - 0.802 - - - ankyrin repeat and KH domain containing 1 [Source:NCBI gene;Acc:416143]
59. GPR107 ENSGALG00000004052 3392 0.799 - - - - - - 0.799 - - - G protein-coupled receptor 107 [Source:NCBI gene;Acc:417186]
60. NEK6 ENSGALG00000001118 20333 0.798 - - - - - - 0.798 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
61. SCML4 ENSGALG00000015309 499 0.798 - - - - - - - - 0.798 - Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
62. TRIAP1 ENSGALG00000007199 4921 0.797 - - - - - - 0.797 - - - TP53 regulated inhibitor of apoptosis 1 [Source:NCBI gene;Acc:416977]
63. GNG2 ENSGALG00000027629 9404 0.796 - - - - - - - - 0.796 - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
64. SAR1B ENSGALG00000038753 6493 0.796 - - - - - - 0.796 - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
65. VIMENTIN VIMENTIN 33105 0.794 - - - - - - 0.794 - - -
66. ACAT2 ENSGALG00000011659 12825 0.793 - - - - - - - - 0.793 - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
67. LIMD1 ENSGALG00000035623 7282 0.792 - - - - - - 0.792 - - - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
68. UBIAD1 ENSGALG00000003358 4675 0.792 - - - - - - 0.792 - - - UbiA prenyltransferase domain containing 1 [Source:NCBI gene;Acc:419456]
69. BLOC1S5 ENSGALG00000012782 5885 0.792 - - - - - - 0.792 - - - biogenesis of lysosomal organelles complex 1 subunit 5 [Source:NCBI gene;Acc:420866]
70. PTGR1 ENSGALG00000015702 3667 0.791 - - - - - - 0.791 - - - prostaglandin reductase 1 [Source:NCBI gene;Acc:427337]
71. LSM5 ENSGALG00000041625 22307 0.791 - - - - - - 0.791 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
72. RNPS1 ENSGALG00000009288 13588 0.79 - - - - - - 0.790 - - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
73. CRLS1 ENSGALG00000009214 8652 0.79 - - - - - - 0.790 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
74. DGCR2 ENSGALG00000005891 8405 0.789 - - - - - - 0.789 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
75. TAGLN3 ENSGALG00000015379 7865 0.789 - - - - - - - - 0.789 - transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
76. VBP1 VBP1 14482 0.787 - - - - - - 0.787 - - -
77. C1H12ORF23 C1H12ORF23 13234 0.787 - - - - - - 0.787 - - -
78. GPR161 ENSGALG00000015247 3473 0.787 - - - - - - - 0.787 - - G protein-coupled receptor 161 [Source:HGNC Symbol;Acc:HGNC:23694]
79. ASUN ASUN 17129 0.786 - - - - - - 0.786 - - -
80. MED9 ENSGALG00000031214 10779 0.786 - - - - - - 0.786 - - - mediator complex subunit 9 [Source:NCBI gene;Acc:416506]
81. TTYH2 ENSGALG00000026940 15628 0.785 - - - - - - - - 0.785 - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
82. PAXIP1 ENSGALG00000036064 3120 0.785 - - - - - - 0.785 - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
83. RGMA ENSGALG00000039173 12874 0.784 - - - - - - - - 0.784 - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
84. CTNNBIP1 ENSGALG00000026306 8049 0.782 - - - - - - 0.782 - - - catenin beta interacting protein 1 [Source:NCBI gene;Acc:771460]
85. PPFIA1 ENSGALG00000035774 5258 0.781 - - - - - - 0.781 - - - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
86. SCML2 ENSGALG00000016537 9348 0.78 - - - - - - 0.780 - - - Scm polycomb group protein like 2 [Source:HGNC Symbol;Acc:HGNC:10581]
87. CNOT11 ENSGALG00000039563 11251 0.78 - - - - - - 0.780 - - - CCR4-NOT transcription complex subunit 11
88. ARG2 ENSGALG00000009519 19523 0.78 - - - - - - - 0.780 - - arginase 2 [Source:NCBI gene;Acc:423272]
89. TARDBP ENSGALG00000002906 24748 0.78 - - - - - - 0.780 - - - TAR DNA binding protein [Source:NCBI gene;Acc:419453]
90. CACNG2 ENSGALG00000031977 196 0.778 - - - - - - - - 0.778 - calcium voltage-gated channel auxiliary subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:1406]
91. NUP133 ENSGALG00000011091 3804 0.778 - - - - - - - 0.778 - - nucleoporin 133 [Source:HGNC Symbol;Acc:HGNC:18016]
92. ENSGALG00000002903 ENSGALG00000002903 18304 0.777 - - - - - - 0.777 - - -
93. RABIF ENSGALG00000000436 6449 0.777 - - - - - - 0.777 - - - RAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]
94. PDDC1 5179 0.777 - - - - - - 0.777 - - - Parkinson disease 7 domain containing 1, transcript variant X6
95. ECEL1 ENSGALG00000030420 670 0.777 - - - - - - - - 0.777 - endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]
96. PPAP2B PPAP2B 11002 0.775 - - - - - - 0.775 - - -
97. FBXO3 ENSGALG00000034029 15089 0.775 - - - - - - 0.775 - - - F-box protein 3 [Source:HGNC Symbol;Acc:HGNC:13582]
98. KLHL13 KLHL13 2712 0.774 - - - - - - 0.774 - - -
99. DARS ENSGALG00000012355 2887 0.773 - - - - - - 0.773 - - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
100. KXD1 ENSGALG00000036736 3771 0.772 - - - - - - 0.772 - - - KxDL motif containing 1 [Source:HGNC Symbol;Acc:HGNC:28420]

There are 310 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA