Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HMGCR

Gene Name Gene ID Reads Annotation
HMGCR ENSGALG00000014948 2514 3-hydroxy-3-methylglutaryl-CoA reductase [Source:NCBI gene;Acc:395145]











Genes with expression patterns similar to HMGCR

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HMGCR ENSGALG00000014948 2514 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 3-hydroxy-3-methylglutaryl-CoA reductase [Source:NCBI gene;Acc:395145]
2. PRPF38B ENSGALG00000001972 2009 1.567 - - - - - - - 0.782 - 0.785 pre-mRNA processing factor 38B
3. PEX2 ENSGALG00000035752 4427 1.515 - - - - - - - 0.767 - 0.748 peroxisomal biogenesis factor 2 [Source:NCBI gene;Acc:420192]
4. TMEM165 ENSGALG00000027886 5468 1.437 - - - - - - - 0.727 - 0.710 transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
5. PPP4R2 ENSGALG00000007810 15127 0.889 - - - - - - - - - 0.889 protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
6. PAK1IP1 ENSGALG00000012724 10907 0.877 - - - - - - - - - 0.877 PAK1 interacting protein 1 [Source:NCBI gene;Acc:420850]
7. WFDC1 ENSGALG00000005503 6152 0.872 - - - - - - - - - 0.872 WAP four-disulfide core domain 1 [Source:NCBI gene;Acc:395238]
8. TMEM128 ENSGALG00000014992 6567 0.869 - - - - - - - - - 0.869 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
9. SERINC1 ENSGALG00000014868 12484 0.867 - - - - - - - - - 0.867 serine incorporator 1 [Source:NCBI gene;Acc:421722]
10. FRMD3 ENSGALG00000012577 999 0.859 - - - - - - - - - 0.859 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
11. NUP107 ENSGALG00000009934 2097 0.858 - - - - - - - - - 0.858 nucleoporin 107 [Source:NCBI gene;Acc:101751988]
12. MYH1D ENSGALG00000027323 365 0.858 - - - - - - - - - 0.858 Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
13. BAZ1A ENSGALG00000010030 3626 0.856 - - - - - - - - - 0.856 bromodomain adjacent to zinc finger domain 1A [Source:HGNC Symbol;Acc:HGNC:960]
14. BRD1 ENSGALG00000029379 6047 0.856 - - - - - - - - - 0.856 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
15. ASAP2 ENSGALG00000016419 1393 0.855 - - - - - - - - - 0.855 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
16. INTS10 ENSGALG00000010130 6320 0.855 - - - - - - - - - 0.855 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
17. ANKRD17 ENSGALG00000011642 3192 0.854 - - - - - - - - - 0.854 ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
18. USP24 ENSGALG00000010805 576 0.854 - - - - - - - - - 0.854 ubiquitin specific peptidase 24 [Source:HGNC Symbol;Acc:HGNC:12623]
19. WHSC1 1712 0.854 - - - - - - - - - 0.854 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
20. KLHL31 ENSGALG00000016309 1518 0.847 - - - - - - - - - 0.847 kelch like family member 31 [Source:HGNC Symbol;Acc:HGNC:21353]
21. NAA30 ENSGALG00000012098 4681 0.847 - - - - - - - - - 0.847 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
22. WASF1 ENSGALG00000015066 5628 0.846 - - - - - - - - - 0.846 WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
23. TBC1D19 ENSGALG00000029673 1868 0.843 - - - - - - - - - 0.843 TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
24. COG6 ENSGALG00000017035 2777 0.843 - - - - - - - - - 0.843 component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
25. YAF2 ENSGALG00000009540 8452 0.842 - - - - - - - - - 0.842 YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
26. TWSG1 ENSGALG00000008400 1869 0.841 - - - - - - - - - 0.841 twisted gastrulation BMP signaling modulator 1 [Source:NCBI gene;Acc:374024]
27. TP53BP1 ENSGALG00000042201 708 0.841 - - - - - - - - - 0.841 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
28. FSTL4 ENSGALG00000031487 529 0.84 - - - - - - - - - 0.840 follistatin like 4 [Source:NCBI gene;Acc:395163]
29. ITSN2 ENSGALG00000016504 651 0.838 - - - - - - - - - 0.838 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
30. ZFR ENSGALG00000003235 8466 0.838 - - - - - - - - - 0.838 zinc finger RNA binding protein, transcript variant X3
31. MSI1 ENSGALG00000007227 2279 0.837 - - - - - - - - - 0.837 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
32. NARS ENSGALG00000040506 9506 0.837 - - - - - - - - - 0.837 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
33. C10orf118 C10orf118 762 0.837 - - - - - - - - - 0.837
34. ZNF106 ENSGALG00000009081 1520 0.836 - - - - - - - - - 0.836 zinc finger protein 106 [Source:HGNC Symbol;Acc:HGNC:12886]
35. CDH1-A CDH1-A 343 0.836 - - - - - - - - - 0.836
36. HDAC2 ENSGALG00000014991 23458 0.836 - - - - - - - - - 0.836 histone deacetylase 2 [Source:NCBI gene;Acc:395635]
37. CASKIN1 604 0.836 - - - - - - - - - 0.836 CASK interacting protein 1, transcript variant X4
38. ATP6V0C ENSGALG00000009229 125870 0.835 - - - - - - - - - 0.835 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
39. CNTRL ENSGALG00000001513 1773 0.835 - - - - - - - - - 0.835 centriolin [Source:NCBI gene;Acc:417121]
40. ARL13B ENSGALG00000015412 2968 0.834 - - - - - - - - - 0.834 ADP ribosylation factor like GTPase 13B [Source:HGNC Symbol;Acc:HGNC:25419]
41. PTX3 ENSGALG00000028284 2984 0.834 - - - - - - - - - 0.834 pentraxin 3 [Source:NCBI gene;Acc:548626]
42. RRAGC ENSGALG00000033079 4966 0.834 - - - - - - - - - 0.834 Ras related GTP binding C [Source:NCBI gene;Acc:419605]
43. APBA3 ENSGALG00000000740 1249 0.834 - - - - - - - - - 0.834 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
44. AURKA ENSGALG00000007768 793 0.834 - - - - - - - - - 0.834 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
45. BZW2 ENSGALG00000010809 29213 0.834 - - - - - - - - - 0.834 basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
46. PWP1 ENSGALG00000012631 10536 0.834 - - - - - - - - - 0.834 PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
47. CCDC51 ENSGALG00000006465 1845 0.834 - - - - - - - - - 0.834 coiled-coil domain containing 51, transcript variant X1
48. WDSUB1 ENSGALG00000012574 2038 0.834 - - - - - - - - - 0.834 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
49. MRPS31 ENSGALG00000017033 9287 0.833 - - - - - - - - - 0.833 mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
50. SMC4 ENSGALG00000009553 15715 0.833 - - - - - - - - - 0.833 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
51. ALDH7A1 ENSGALG00000008229 5891 0.832 - - - - - - - - - 0.832 aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877]
52. ARHGAP21 ENSGALG00000007721 3961 0.832 - - - - - - - - - 0.832 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
53. HABP4 ENSGALG00000012628 2894 0.831 - - - - - - - - - 0.831 hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
54. SLC39A13 ENSGALG00000008122 2003 0.831 - - - - - - - - - 0.831 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
55. FREM3 ENSGALG00000020561 1824 0.83 - - - - - - - - - 0.830 FRAS1 related extracellular matrix 3
56. RAD50 ENSGALG00000006794 4308 0.83 - - - - - - - - - 0.830 RAD50 double strand break repair protein, transcript variant X4
57. FAM129A ENSGALG00000004812 269 0.83 - - - - - - - - - 0.830 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
58. ZNF6 ZNF6 138 0.83 - - - - - - - - - 0.830
59. GORASP1 ENSGALG00000006033 4033 0.829 - - - - - - - - - 0.829 golgi reassembly stacking protein 1 [Source:NCBI gene;Acc:420426]
60. PCLO 249 0.829 - - - - - - - - - 0.829 piccolo presynaptic cytomatrix protein
61. SOX6 ENSGALG00000006074 102 0.829 - - - - - - - - - 0.829 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
62. DCAF5 ENSGALG00000009463 1297 0.828 - - - - - - - - - 0.828 DDB1 and CUL4 associated factor 5 [Source:HGNC Symbol;Acc:HGNC:20224]
63. CRYM ENSGALG00000002484 3558 0.828 - - - - - - - - - 0.828 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
64. 5S_2 5S_2 58 0.827 - - - - - - - - - 0.827
65. RBM5 30998 0.827 - - - - - - - - - 0.827 RNA binding motif protein 5, transcript variant X1
66. IL10R2 IL10R2 72 0.827 - - - - - - - - - 0.827
67. CPNE2 ENSGALG00000001316 236 0.826 - - - - - - - - - 0.826 copine 2 [Source:NCBI gene;Acc:415646]
68. FBLIM1 ENSGALG00000003636 1498 0.826 - - - - - - - - - 0.826 filamin binding LIM protein 1 [Source:HGNC Symbol;Acc:HGNC:24686]
69. SMARCC1 ENSGALG00000032642 4842 0.825 - - - - - - - - - 0.825 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
70. MIPEP ENSGALG00000017118 8666 0.825 - - - - - - - - - 0.825 mitochondrial intermediate peptidase [Source:HGNC Symbol;Acc:HGNC:7104]
71. PREX2 ENSGALG00000042354 134 0.825 - - - - - - - - - 0.825 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
72. HAUS8 ENSGALG00000003727 351 0.825 - - - - - - - - - 0.825 HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
73. FAM190B FAM190B 165 0.825 - - - - - - - - - 0.825
74. SSH1 ENSGALG00000004928 222 0.825 - - - - - - - - - 0.825 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
75. C26H6ORF89 C26H6ORF89 1826 0.824 - - - - - - - - - 0.824
76. CCT8 ENSGALG00000015821 12161 0.824 - - - - - - - - - 0.824 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
77. PNPT1 ENSGALG00000043545 1306 0.824 - - - - - - - - - 0.824 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
78. GOT2 ENSGALG00000002321 4961 0.824 - - - - - - - - - 0.824 glutamic-oxaloacetic transaminase 2 [Source:NCBI gene;Acc:396533]
79. CXADR ENSGALG00000015701 96 0.824 - - - - - - - - - 0.824 coxsackie virus and adenovirus receptor, transcript variant X2
80. ESRRG ENSGALG00000009645 2783 0.824 - - - - - - - - - 0.824 estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
81. ITGA9 ENSGALG00000029378 415 0.824 - - - - - - - - - 0.824 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
82. SGSH ENSGALG00000007027 1115 0.824 - - - - - - - - - 0.824 N-sulfoglucosamine sulfohydrolase [Source:HGNC Symbol;Acc:HGNC:10818]
83. DIAPH3 ENSGALG00000016937 1069 0.823 - - - - - - - - - 0.823 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
84. OSBPL1A ENSGALG00000015086 2702 0.823 - - - - - - - - - 0.823 oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
85. TMEM130 ENSGALG00000003569 949 0.823 - - - - - - - - - 0.823 transmembrane protein 130 [Source:HGNC Symbol;Acc:HGNC:25429]
86. TMEM68 ENSGALG00000031835 1691 0.821 - - - - - - - - - 0.821 transmembrane protein 68 [Source:NCBI gene;Acc:421124]
87. GRTP1 ENSGALG00000016828 3145 0.821 - - - - - - - - - 0.821 growth hormone regulated TBC protein 1 [Source:HGNC Symbol;Acc:HGNC:20310]
88. PLEKHG1 ENSGALG00000012395 2708 0.82 - - - - - - - - - 0.820 pleckstrin homology and RhoGEF domain containing G1 [Source:HGNC Symbol;Acc:HGNC:20884]
89. FASTKD3 ENSGALG00000033521 1186 0.82 - - - - - - - - - 0.820 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
90. CPSF2 ENSGALG00000010783 5236 0.819 - - - - - - - - - 0.819 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
91. HSPA12A ENSGALG00000009248 7783 0.818 - - - - - - - - - 0.818 heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
92. CLSPN ENSGALG00000002346 2590 0.818 - - - - - - - - - 0.818 claspin [Source:NCBI gene;Acc:428223]
93. MTSS1 ENSGALG00000041969 1312 0.818 - - - - - - - - - 0.818 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
94. FBXO38 ENSGALG00000038627 2658 0.818 - - - - - - - - - 0.818 F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]
95. MGA 1911 0.818 - - - - - - - - - 0.818 MGA, MAX dimerization protein, transcript variant X15
96. TTC19 ENSGALG00000004416 1875 0.817 - - - - - - - - - 0.817 tetratricopeptide repeat domain 19 [Source:HGNC Symbol;Acc:HGNC:26006]
97. SLC2A3 SLC2A3 527 0.817 - - - - - - - - - 0.817
98. NEO1 ENSGALG00000001774 10165 0.817 - - - - - - - - - 0.817 neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
99. PM20D2 ENSGALG00000015779 1301 0.817 - - - - - - - - - 0.817 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
100. HOTAIRM1 HOTAIRM1 4335 0.816 - - - - - - - - - 0.816

There are 308 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA