Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HMGCL

Gene Name Gene ID Reads Annotation
HMGCL ENSGALG00000004057 5201 3-hydroxymethyl-3-methylglutaryl-CoA lyase [Source:NCBI gene;Acc:396316]











Genes with expression patterns similar to HMGCL

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HMGCL ENSGALG00000004057 5201 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 3-hydroxymethyl-3-methylglutaryl-CoA lyase [Source:NCBI gene;Acc:396316]
2. CLCN5 ENSGALG00000007234 1143 0.819 - - - - - - - - - 0.819 chloride voltage-gated channel 5 [Source:HGNC Symbol;Acc:HGNC:2023]
3. HBE 329974 0.791 - - - - - - - - - 0.791 hemoglobin subunit epsilon
4. AARSD1 ENSGALG00000002880 3068 0.77 - - - - - - 0.770 - - - Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328355]
5. ROCK2 ENSGALG00000016451 780 0.768 - - - - - - - - - 0.768 Rho associated coiled-coil containing protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:10252]
6. HERC1 ENSGALG00000003381 672 0.767 - - - - - - - - - 0.767 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X8
7. ENSGALG00000028422 ENSGALG00000028422 1504 0.764 - - - - - - - - - 0.764
8. AP1S3 ENSGALG00000005171 2981 0.762 - - - - - - - 0.762 - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
9. SH3GLB2 ENSGALG00000039541 1127 0.754 - - - - - - 0.754 - - - SH3 domain containing GRB2 like endophilin B2 [Source:NCBI gene;Acc:417197]
10. GRAMD4 ENSGALG00000034274 3826 0.754 - - - - - - - 0.754 - - GRAM domain containing 4 [Source:HGNC Symbol;Acc:HGNC:29113]
11. NUBP2 ENSGALG00000002316 3643 0.753 - - - - - - - 0.753 - - nucleotide binding protein 2 [Source:NCBI gene;Acc:416402]
12. RYK ENSGALG00000006488 10533 0.752 - - - - - - - 0.752 - - receptor-like tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:10481]
13. ARHGAP21 ENSGALG00000007721 3961 0.752 - - - - - - - 0.752 - - Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
14. FBXO32 ENSGALG00000041202 1066 0.75 - - - - - - - - - 0.750 F-box protein 32 [Source:NCBI gene;Acc:420343]
15. SLC45A4 ENSGALG00000034971 142 0.746 - - - - - - - - - 0.746 solute carrier family 45 member 4 [Source:HGNC Symbol;Acc:HGNC:29196]
16. ODZ2 ODZ2 1380 0.746 - - - - - - - - - 0.746
17. FGF9 ENSGALG00000025748 469 0.742 - - - - - - - - - 0.742 fibroblast growth factor 9 [Source:NCBI gene;Acc:378917]
18. HBZ ENSGALG00000023740 507289 0.74 - - - - - - - - - 0.740 hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
19. ZC4H2 ENSGALG00000042725 361 0.74 - - - - - - - 0.740 - - zinc finger C4H2-type containing, transcript variant X4
20. NHE1 NHE1 1117 0.74 - - - - - - 0.740 - - -
21. FAM110D ENSGALG00000046085 2193 0.734 - - - - - - - - - 0.734 family with sequence similarity 110 member D [Source:HGNC Symbol;Acc:HGNC:25860]
22. ALG8 ENSGALG00000019042 3636 0.734 - - - - - - - 0.734 - - ALG8, alpha-1,3-glucosyltransferase [Source:HGNC Symbol;Acc:HGNC:23161]
23. TAF2 ENSGALG00000043193 6311 0.732 - - - - - - - - - 0.732 TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
24. FAM175A 2036 0.732 - - - - - - - 0.732 - - family with sequence similarity 175 member A, transcript variant X1
25. SPDL1 ENSGALG00000001942 4403 0.73 - - - - - - - 0.730 - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
26. SLC25A39 ENSGALG00000042894 10654 0.729 - - - - - - - - - 0.729 solute carrier family 25 member 39 [Source:HGNC Symbol;Acc:HGNC:24279]
27. LRPPRC ENSGALG00000009967 17091 0.728 - - - - - - - - - 0.728 leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
28. CHURC1 ENSGALG00000042309 12066 0.725 - - 0.725 - - - - - - - churchill domain containing 1 [Source:NCBI gene;Acc:395448]
29. STRIP1 ENSGALG00000037995 621 0.723 - - - - - - - - - 0.723 striatin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:25916]
30. LDHD ENSGALG00000023828 60 0.719 - - - - - - - - - 0.719 lactate dehydrogenase D [Source:HGNC Symbol;Acc:HGNC:19708]
31. ABR ENSGALG00000004364 2802 0.718 - - - - - - - 0.718 - - ABR, RhoGEF and GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:81]
32. PYGO1 ENSGALG00000004369 527 0.718 - - - - - - - 0.718 - - pygopus family PHD finger 1 [Source:NCBI gene;Acc:415408]
33. GBA2 ENSGALG00000002412 2913 0.718 - - - - - - - - 0.718 - glucosylceramidase beta 2 [Source:HGNC Symbol;Acc:HGNC:18986]
34. ARHGAP29 ENSGALG00000005683 3622 0.718 - - - - - - - 0.718 - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
35. AP1B1 ENSGALG00000042213 4828 0.718 - - - - - - - - - 0.718 adaptor related protein complex 1 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:554]
36. ZNF217 ZNF217 14511 0.714 - - - - - - - 0.714 - -
37. ATP6AP1 ENSGALG00000008836 4343 0.714 - - - - - - 0.714 - - - ATPase H+ transporting accessory protein 1 [Source:NCBI gene;Acc:427854]
38. PSMD13 ENSGALG00000043684 14720 0.712 - - - - - - - - - 0.712 proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
39. PIGC ENSGALG00000027608 2132 0.71 - - - - - - 0.710 - - - phosphatidylinositol glycan anchor biosynthesis class C [Source:HGNC Symbol;Acc:HGNC:8960]
40. IRF2 ENSGALG00000010642 923 0.708 - - - - - - - 0.708 - - interferon regulatory factor 2 [Source:NCBI gene;Acc:396115]
41. TMEM68 ENSGALG00000031835 1691 0.707 - - - - - - 0.707 - - - transmembrane protein 68 [Source:NCBI gene;Acc:421124]
42. HES1 ENSGALG00000028015 6818 0.706 - - - - - - 0.706 - - - hes family bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:5192]
43. NSUN5 ENSGALG00000000891 1356 0.705 - - - - - - - - - 0.705 NOP2/Sun RNA methyltransferase family member 5 [Source:HGNC Symbol;Acc:HGNC:16385]
44. FAM221A ENSGALG00000010977 695 0.703 - - - - - - 0.703 - - - family with sequence similarity 221 member A [Source:HGNC Symbol;Acc:HGNC:27977]
45. RFC5 ENSGALG00000026517 26113 0.703 - - - - - - 0.703 - - - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
46. ENPP1 ENSGALG00000034397 278 0.703 - - - - - - - - - 0.703 ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:3356]
47. MNAT1 ENSGALG00000011910 6809 0.702 - - - - - - - 0.702 - - MNAT1, CDK activating kinase assembly factor [Source:HGNC Symbol;Acc:HGNC:7181]
48. CUTC ENSGALG00000037283 2530 0.702 - - - - - - - - - 0.702 cutC copper transporter [Source:NCBI gene;Acc:423829]
49. HBG1 HBG1 468163 0.702 - - - - - - - - - 0.702
50. SBNO2 ENSGALG00000037522 1546 0.702 - - - - - - 0.702 - - - strawberry notch homolog 2 [Source:HGNC Symbol;Acc:HGNC:29158]
51. SFXN3 ENSGALG00000023621 2957 0.701 - - - - - - 0.701 - - - sideroflexin 3 [Source:HGNC Symbol;Acc:HGNC:16087]
52. RIN2 ENSGALG00000008457 2661 0.701 - - - - - - - 0.701 - - Ras and Rab interactor 2 [Source:HGNC Symbol;Acc:HGNC:18750]
53. FKBP10 ENSGALG00000025764 7668 0.7 - - - - - - - - - 0.700 FK506 binding protein 10 [Source:HGNC Symbol;Acc:HGNC:18169]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA