Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for HMGB2

Gene Name Gene ID Reads Annotation
HMGB2 ENSGALG00000010745 89235 high mobility group box 2 [Source:NCBI gene;Acc:396482]











Genes with expression patterns similar to HMGB2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HMGB2 ENSGALG00000010745 89235 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 high mobility group box 2 [Source:NCBI gene;Acc:396482]
2. RBM17 ENSGALG00000006332 12656 1.702 - - - - 0.837 - 0.865 - - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
3. SSR3 ENSGALG00000028683 24334 1.671 - - - - 0.757 - 0.914 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
4. UBE2D1 ENSGALG00000021213 5876 1.656 - - - - 0.852 - 0.804 - - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
5. LSM5 ENSGALG00000041625 22307 1.611 - - - - 0.776 - 0.835 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
6. CMPK CMPK 9569 1.566 - - - - - 0.735 0.831 - - -
7. TFDP1 ENSGALG00000016823 17019 1.553 - - - - - - 0.841 - - 0.712 transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
8. TET1 ENSGALG00000031604 13002 1.522 - - - - - - 0.814 0.708 - - tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
9. PEBP1 ENSGALG00000007403 77502 1.501 - - - - 0.798 - - - 0.703 - phosphatidylethanolamine binding protein 1 [Source:NCBI gene;Acc:416990]
10. CASK ENSGALG00000042400 8485 1.496 - - - - - - 0.785 0.711 - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
11. TIMM8A ENSGALG00000004963 14263 1.471 - - - - - - 0.740 - 0.731 - translocase of inner mitochondrial membrane 8A [Source:NCBI gene;Acc:422190]
12. GSTO1 ENSGALG00000008409 7561 1.456 - - - - - - 0.754 - 0.702 - glutathione S-transferase omega 1 [Source:NCBI gene;Acc:423881]
13. EHMT1 ENSGALG00000033678 5720 1.435 - - - - - - 0.727 0.708 - - euchromatic histone lysine methyltransferase 1 [Source:NCBI gene;Acc:417250]
14. NAV2 ENSGALG00000003999 6587 1.43 - - - - - - 0.728 0.702 - - neuron navigator 2 [Source:HGNC Symbol;Acc:HGNC:15997]
15. EIF2S1 ENSGALG00000009565 63906 0.946 - - - - - - 0.946 - - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
16. MRPL20 ENSGALG00000001542 28764 0.942 - - - - - - 0.942 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
17. PARP1 ENSGALG00000009228 39433 0.933 - - - - - - 0.933 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
18. DKC1 ENSGALG00000005054 30350 0.93 - - - - - - 0.930 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
19. GLO1 ENSGALG00000010127 31662 0.914 - - - - - - 0.914 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
20. PPP1R7 ENSGALG00000031766 22187 0.914 - - - - - - 0.914 - - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
21. NDUFAB1 ENSGALG00000006073 40467 0.913 - - - - - - 0.913 - - - NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
22. CSE1L ENSGALG00000004707 20653 0.911 - - - - - - 0.911 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
23. SIKE1 ENSGALG00000002147 20836 0.91 - - - - - - 0.910 - - - suppressor of IKBKE 1 [Source:NCBI gene;Acc:419887]
24. YWHAZ ENSGALG00000031387 84985 0.909 - - - - - - 0.909 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
25. EIF4A2 ENSGALG00000008684 58507 0.908 - - - - - - 0.908 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
26. PPIH ENSGALG00000004874 25558 0.906 - - - - - - 0.906 - - - peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
27. PCNP ENSGALG00000015330 15750 0.905 - - - - - - 0.905 - - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
28. ENSGALG00000028649 ENSGALG00000028649 135970 0.902 - - - - 0.902 - - - - -
29. KDELR2 ENSGALG00000040793 29669 0.902 - - - - - - 0.902 - - - KDEL endoplasmic reticulum protein retention receptor 2 [Source:NCBI gene;Acc:771927]
30. RABGGTB ENSGALG00000011388 11654 0.901 - - - - - - 0.901 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
31. AZIN1 ENSGALG00000029295 11085 0.9 - - - - - - 0.900 - - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
32. PSMB4 ENSGALG00000000905 46735 0.895 - - - - - - 0.895 - - - proteasome subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:9541]
33. METAP2 ENSGALG00000011377 16311 0.895 - - - - - - 0.895 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
34. TMED7 ENSGALG00000028484 21008 0.894 - - - - - - 0.894 - - - Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
35. ENSGALG00000009044 ENSGALG00000009044 14492 0.889 - - - - - - 0.889 - - -
36. TXNDC17 ENSGALG00000027950 45004 0.888 - - - - - - 0.888 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
37. NAA38 ENSGALG00000045783 11229 0.888 - - - - - - 0.888 - - - N(alpha)-acetyltransferase 38, NatC auxiliary subunit, transcript variant X3
38. SMARCA5 ENSGALG00000009913 20059 0.886 - - - - - - 0.886 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]
39. DNAJC9 ENSGALG00000002701 19249 0.886 - - - - - - 0.886 - - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
40. SNRNP40 ENSGALG00000000615 32298 0.885 - - - - - - 0.885 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
41. KIF2C ENSGALG00000010120 8999 0.885 - - - - - - 0.885 - - - kinesin family member 2C, transcript variant X1
42. PSMB2 ENSGALG00000026421 51885 0.884 - - - - - - 0.884 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
43. PTP4A2 ENSGALG00000003265 24826 0.884 - - - - - - 0.884 - - - protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
44. SSBP1 ENSGALG00000012876 34256 0.884 - - - - - - 0.884 - - - single stranded DNA binding protein 1 [Source:NCBI gene;Acc:418122]
45. SRI ENSGALG00000008985 13865 0.883 - - - - - - 0.883 - - - sorcin [Source:NCBI gene;Acc:420538]
46. SMC4 ENSGALG00000009553 15715 0.882 - - - - - - 0.882 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
47. MORF4L1 ENSGALG00000008146 29940 0.881 - - - - - - 0.881 - - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
48. NIFK ENSGALG00000011650 14990 0.881 - - - - - - 0.881 - - - nucleolar protein interacting with the FHA domain of MKI67 [Source:HGNC Symbol;Acc:HGNC:17838]
49. RAD21 ENSGALG00000029523 25658 0.88 - - - - - - 0.880 - - - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
50. THRAP3 ENSGALG00000002144 21958 0.879 - - - - - - 0.879 - - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
51. RUVBL1 ENSGALG00000005931 9379 0.878 - - - - - - 0.878 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
52. SLC25A3 ENSGALG00000011514 62606 0.878 - - - - - - 0.878 - - - solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
53. ENSGALG00000006463 ENSGALG00000006463 45151 0.878 - - - - - - 0.878 - - -
54. ENSGALG00000017396 ENSGALG00000017396 9028 0.876 - - - - - - 0.876 - - -
55. PSMB7 ENSGALG00000001103 42683 0.876 - - - - - - 0.876 - - - proteasome subunit beta 7 [Source:NCBI gene;Acc:378915]
56. EBNA1BP2 ENSGALG00000009045 17453 0.875 - - - - - - 0.875 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
57. DERL1 ENSGALG00000033950 15074 0.873 - - - - - - 0.873 - - - derlin 1 [Source:NCBI gene;Acc:420350]
58. SFPQ ENSGALG00000002514 66832 0.873 - - - - - - 0.873 - - - splicing factor proline and glutamine rich [Source:HGNC Symbol;Acc:HGNC:10774]
59. HSPA4 ENSGALG00000040882 20966 0.872 - - - - - - 0.872 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
60. BRP44 BRP44 17093 0.872 - - - - - - 0.872 - - -
61. EIF3B ENSGALG00000040999 49971 0.871 - - - - - - 0.871 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
62. AATF ENSGALG00000005420 6501 0.87 - - - - - - 0.870 - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
63. GLRX3 ENSGALG00000010464 22578 0.869 - - - - - - 0.869 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
64. PPP1R2 ENSGALG00000029789 11594 0.869 - - - - - - 0.869 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
65. FKBP12 FKBP12 64317 0.868 - - - - - - 0.868 - - -
66. RANGAP1 ENSGALG00000011966 20170 0.868 - - - - - - 0.868 - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
67. API5 ENSGALG00000037968 18265 0.864 - - - - - - 0.864 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
68. EWSR1 ENSGALG00000008149 13014 0.864 - - - - - - 0.864 - - - EWS RNA binding protein 1 [Source:NCBI gene;Acc:417022]
69. UQCRC2 ENSGALG00000002490 23477 0.864 - - - - - - 0.864 - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
70. CASP3 ENSGALG00000010638 11572 0.864 - - - - - - 0.864 - - - caspase 3 [Source:NCBI gene;Acc:395476]
71. MAP3K7 ENSGALG00000015596 15164 0.864 - - - - - - 0.864 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
72. DUT ENSGALG00000038032 34659 0.863 - - - - - - 0.863 - - - deoxyuridine triphosphatase [Source:NCBI gene;Acc:769338]
73. ATG3 ENSGALG00000015204 11277 0.862 - - - - - - 0.862 - - - autophagy related 3 [Source:NCBI gene;Acc:418369]
74. SIVA1 ENSGALG00000011619 15130 0.862 - - - - - - 0.862 - - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
75. TTYH2 ENSGALG00000026940 15628 0.861 - - - - - - 0.861 - - - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
76. NUTF2 ENSGALG00000001602 32832 0.861 - - - - - - 0.861 - - - nuclear transport factor 2 [Source:NCBI gene;Acc:415655]
77. SEC11A ENSGALG00000037553 32123 0.861 - - - - - - 0.861 - - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
78. NDUFA12 ENSGALG00000011325 19807 0.86 - - - - - - 0.860 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
79. TMEM184C ENSGALG00000010019 7856 0.86 - - - - - - 0.860 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
80. BLMH ENSGALG00000004259 36907 0.86 - - - - - - 0.860 - - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
81. RANBP1 ENSGALG00000002107 17715 0.86 - - - - - - 0.860 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
82. TMEM30A ENSGALG00000015904 8533 0.859 - - - - - - 0.859 - - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
83. C11H16ORF80 C11H16ORF80 18673 0.859 - - - - - - 0.859 - - -
84. RPL36AL ENSGALG00000004952 205590 0.858 - - - - - - 0.858 - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
85. PDCD10 ENSGALG00000009477 7061 0.858 - - - - - - 0.858 - - - programmed cell death 10 [Source:NCBI gene;Acc:425003]
86. ASUN ASUN 17129 0.858 - - - - - - 0.858 - - -
87. TMEM70 ENSGALG00000033568 10720 0.858 - - - - - - 0.858 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
88. C1H12ORF23 C1H12ORF23 13234 0.857 - - - - - - 0.857 - - -
89. PPP1CC ENSGALG00000004571 14748 0.856 - - - - - - 0.856 - - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
90. ATP2B1 ENSGALG00000030550 15123 0.854 - - - - - - 0.854 - - - ATPase plasma membrane Ca2+ transporting 1 [Source:NCBI gene;Acc:374244]
91. TPMT ENSGALG00000012687 9537 0.854 - - - - - - 0.854 - - - thiopurine S-methyltransferase [Source:HGNC Symbol;Acc:HGNC:12014]
92. DEK ENSGALG00000012684 14179 0.853 - - - - - - 0.853 - - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
93. ULK2 ENSGALG00000004727 10729 0.853 - - - - - - 0.853 - - - unc-51 like autophagy activating kinase 2 [Source:HGNC Symbol;Acc:HGNC:13480]
94. RBBP4 ENSGALG00000003522 72455 0.853 - - - - - - 0.853 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
95. RAB11B ENSGALG00000000613 20696 0.851 - - - - - - 0.851 - - - RAB11B, member RAS oncogene family [Source:NCBI gene;Acc:420063]
96. RRP1B ENSGALG00000035696 12309 0.851 - - - - - - 0.851 - - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
97. NUP37 ENSGALG00000012759 9985 0.85 - - - - - - 0.850 - - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
98. SOD1 ENSGALG00000015844 35836 0.85 - - - - - - 0.850 - - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
99. SKP2 ENSGALG00000003547 14637 0.849 - - - - - - 0.849 - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
100. CBLL1 ENSGALG00000038981 6725 0.849 - - - - - - 0.849 - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]

There are 930 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA