Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for HMG20B

Gene Name Gene ID Reads Annotation
HMG20B ENSGALG00000027838 3587 high mobility group 20B [Source:HGNC Symbol;Acc:HGNC:5002]











Genes with expression patterns similar to HMG20B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. HMG20B ENSGALG00000027838 3587 9 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 high mobility group 20B [Source:HGNC Symbol;Acc:HGNC:5002]
2. DCTN4 ENSGALG00000004534 8442 1.488 - - - - - - 0.706 0.782 - - dynactin subunit 4 [Source:HGNC Symbol;Acc:HGNC:15518]
3. UNC119B ENSGALG00000026722 8622 1.416 - - - - - - 0.706 0.710 - - unc-119 lipid binding chaperone B [Source:HGNC Symbol;Acc:HGNC:16488]
4. NUMB ENSGALG00000009300 4220 0.825 - - - - - - - 0.825 - - NUMB, endocytic adaptor protein [Source:NCBI gene;Acc:395639]
5. ENSGALG00000013327 ENSGALG00000013327 16 0.821 - - - 0.821 - - - - - -
6. ADRA2C ENSGALG00000015608 42 0.821 - - - 0.821 - - - - - - adrenoceptor alpha 2C [Source:HGNC Symbol;Acc:HGNC:283]
7. ENSGALG00000008047 ENSGALG00000008047 13 0.821 - - - 0.821 - - - - - -
8. ENPP7 ENSGALG00000013743 6 0.821 - - - 0.821 - - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 7 [Source:HGNC Symbol;Acc:HGNC:23764]
9. DUPD1 ENSGALG00000005019 18 0.821 - - - 0.821 - - - - - - dual specificity phosphatase and pro isomerase domain containing 1 [Source:NCBI gene;Acc:423733]
10. ITIH2 ENSGALG00000006833 8 0.819 - - - 0.819 - - - - - - inter-alpha-trypsin inhibitor heavy chain 2 [Source:NCBI gene;Acc:419110]
11. TM4SF1a ENSGALG00000028629 6 0.819 - - - 0.819 - - - - - - transmembrane 4 L six family member 1a [Source:NCBI gene;Acc:418999]
12. CSF3 ENSGALG00000030907 11 0.818 - - - 0.818 - - - - - - colony stimulating factor 3 [Source:NCBI gene;Acc:396216]
13. AMBP ENSGALG00000030255 18 0.816 - - - 0.816 - - - - - - alpha-1-microglobulin/bikunin precursor [Source:NCBI gene;Acc:770795]
14. EFCAB11 ENSGALG00000020402 16 0.815 - - - 0.815 - - - - - - EF-hand calcium binding domain 11 [Source:HGNC Symbol;Acc:HGNC:20357]
15. AGT ENSGALG00000011117 7 0.807 - - - 0.807 - - - - - - angiotensinogen [Source:HGNC Symbol;Acc:HGNC:333]
16. LPAR6 ENSGALG00000016998 36 0.807 - - - 0.807 - - - - - - lysophosphatidic acid receptor 6 [Source:NCBI gene;Acc:396118]
17. PLG ENSGALG00000004293 11 0.802 - - - 0.802 - - - - - - plasminogen
18. MARVELD3 ENSGALG00000012886 155 0.802 - - - 0.802 - - - - - - MARVEL domain containing 3
19. BSPRY ENSGALG00000008861 98 0.802 - - - 0.802 - - - - - - B-box and SPRY domain containing [Source:HGNC Symbol;Acc:HGNC:18232]
20. ENSGALG00000004753 ENSGALG00000004753 63 0.801 - - - 0.801 - - - - - -
21. USP32 ENSGALG00000005350 1686 0.8 - - - 0.800 - - - - - - ubiquitin specific peptidase 32, transcript variant X2
22. KTN1 ENSGALG00000012137 4058 0.798 - - - - - - - - 0.798 - kinectin 1 [Source:NCBI gene;Acc:396335]
23. FIBIN ENSGALG00000023904 3350 0.798 - - - - - - - 0.798 - - fin bud initiation factor homolog [Source:NCBI gene;Acc:426933]
24. PYGB ENSGALG00000008508 2812 0.798 - - - - - - 0.798 - - - glycogen phosphorylase B [Source:NCBI gene;Acc:421248]
25. UNC5C ENSGALG00000012219 229 0.797 - - - 0.797 - - - - - - unc-5 netrin receptor C [Source:NCBI gene;Acc:395101]
26. ANAPC4 ENSGALG00000014378 1556 0.794 - - - 0.794 - - - - - - anaphase promoting complex subunit 4, transcript variant X2
27. VPS72 ENSGALG00000000793 329 0.793 - - - - - - - - 0.793 - vacuolar protein sorting 72 homolog [Source:HGNC Symbol;Acc:HGNC:11644]
28. FAM20A ENSGALG00000040655 934 0.791 - - - 0.791 - - - - - - FAM20A, golgi associated secretory pathway pseudokinase [Source:HGNC Symbol;Acc:HGNC:23015]
29. ENTPD8L ENSGALG00000008936 731 0.788 - - - 0.788 - - - - - - ectonucleoside triphosphate diphosphohydrolase 8-like
30. SLC38A7 ENSGALG00000002313 25 0.788 - - - 0.788 - - - - - - solute carrier family 38 member 7, transcript variant X5
31. PRKAR2A ENSGALG00000007023 909 0.786 - - - 0.786 - - - - - - protein kinase cAMP-dependent type II regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9391]
32. CALCOCO2 ENSGALG00000001525 3121 0.784 - - - - - - - - 0.784 - calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]
33. ENSGALG00000028340 ENSGALG00000028340 31 0.782 - - - 0.782 - - - - - -
34. MIA2 ENSGALG00000010189 1223 0.778 - - - - - - - - 0.778 - melanoma inhibitory activity 2, transcript variant X5
35. DNMT3B ENSGALG00000041461 12959 0.777 - - - - - - - 0.777 - - DNA methyltransferase 3 beta [Source:NCBI gene;Acc:419287]
36. GCAT ENSGALG00000012312 7906 0.776 - - - - - - - 0.776 - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
37. ACTG2 ENSGALG00000041634 4529 0.775 - - - - - - - 0.775 - - actin, gamma 2, smooth muscle, enteric [Source:NCBI gene;Acc:396084]
38. PTRH2 ENSGALG00000005150 4756 0.773 - - - - - - - 0.773 - - peptidyl-tRNA hydrolase 2 [Source:NCBI gene;Acc:417634]
39. TIMM8A ENSGALG00000004963 14263 0.773 - - - - - - 0.773 - - - translocase of inner mitochondrial membrane 8A [Source:NCBI gene;Acc:422190]
40. RAB2A ENSGALG00000015450 990 0.773 - - - 0.773 - - - - - - RAB2A, member RAS oncogene family [Source:NCBI gene;Acc:396153]
41. SCARB2 ENSGALG00000011499 2763 0.772 - - - - - - - - 0.772 - scavenger receptor class B member 2 [Source:HGNC Symbol;Acc:HGNC:1665]
42. SH2D4A ENSGALG00000010122 206 0.772 - - - 0.772 - - - - - - SH2 domain containing 4A [Source:HGNC Symbol;Acc:HGNC:26102]
43. ENSGALG00000021024 ENSGALG00000021024 1339 0.771 - - - - - - - - 0.771 -
44. ENSGALG00000017691 ENSGALG00000017691 48 0.769 - - - 0.769 - - - - - -
45. MICALL1 ENSGALG00000012265 3753 0.769 - - - - - - - 0.769 - - MICAL like 1 [Source:NCBI gene;Acc:418032]
46. LRBA ENSGALG00000010061 67 0.768 - - - 0.768 - - - - - - LPS responsive beige-like anchor protein [Source:HGNC Symbol;Acc:HGNC:1742]
47. NNT ENSGALG00000014869 8496 0.766 - - - - - - - 0.766 - - nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
48. BLOC1S5 ENSGALG00000012782 5885 0.763 - - - - - - 0.763 - - - biogenesis of lysosomal organelles complex 1 subunit 5 [Source:NCBI gene;Acc:420866]
49. TBC1D8 ENSGALG00000016776 42 0.763 - - - 0.763 - - - - - - TBC1 domain family member 8 [Source:HGNC Symbol;Acc:HGNC:17791]
50. PCBD2 ENSGALG00000006367 5364 0.761 - - - - - - - 0.761 - - pterin-4 alpha-carbinolamine dehydratase 2 [Source:NCBI gene;Acc:374030]
51. ENPP6 ENSGALG00000010645 272 0.761 - - - 0.761 - - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:HGNC Symbol;Acc:HGNC:23409]
52. TMEM237 ENSGALG00000008381 1317 0.76 - - - - - - - - 0.760 - transmembrane protein 237 [Source:NCBI gene;Acc:424084]
53. LDLRAD1 ENSGALG00000020647 128 0.759 - - - 0.759 - - - - - - low density lipoprotein receptor class A domain containing 1 [Source:HGNC Symbol;Acc:HGNC:32069]
54. DYNC2H1 ENSGALG00000041814 1770 0.757 - - - - - - - - 0.757 - dynein cytoplasmic 2 heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:2962]
55. XPNPEP2 ENSGALG00000025935 57 0.757 - - - 0.757 - - - - - - X-prolyl aminopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:12823]
56. DHRS12 270 0.757 - - - 0.757 - - - - - - dehydrogenase/reductase 12
57. MED21 ENSGALG00000027435 5766 0.756 - - - - - - - 0.756 - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
58. OTUD7A ENSGALG00000003802 72 0.755 - - - 0.755 - - - - - - OTU deubiquitinase 7A [Source:HGNC Symbol;Acc:HGNC:20718]
59. SERPIND1 ENSGALG00000039239 22 0.753 - - - 0.753 - - - - - - serpin family D member 1 [Source:HGNC Symbol;Acc:HGNC:4838]
60. PPP2R2A ENSGALG00000000235 4263 0.752 - - - - - - - 0.752 - - protein phosphatase 2 regulatory subunit Balpha [Source:NCBI gene;Acc:419523]
61. CPT1A ENSGALG00000007077 3199 0.752 - - - - - - - 0.752 - - carnitine palmitoyltransferase 1A [Source:NCBI gene;Acc:423118]
62. ZC3HAV1 ENSGALG00000013911 162 0.751 - - - - - - - - 0.751 - zinc finger CCCH-type containing, antiviral 1 [Source:NCBI gene;Acc:426315]
63. MGTNIPA2L ENSGALG00000004975 143 0.751 - - - 0.751 - - - - - - magnesium transporter NIPA2-like
64. ALDH3A2 ENSGALG00000004763 3363 0.75 - - - - - - - 0.750 - - aldehyde dehydrogenase 3 family member A2 [Source:NCBI gene;Acc:417615]
65. ENSGALG00000015097 ENSGALG00000015097 93 0.749 - - - 0.749 - - - - - -
66. SLC25A24 ENSGALG00000001938 3671 0.749 - - - - - - - 0.749 - - solute carrier family 25 member 24 [Source:HGNC Symbol;Acc:HGNC:20662]
67. GPATCH2 ENSGALG00000009627 4061 0.748 - - - - - - - - - 0.748 G-patch domain containing 2 [Source:NCBI gene;Acc:421355]
68. TMEM53 ENSGALG00000010110 2588 0.747 - - - - - - - 0.747 - - transmembrane protein 53 [Source:NCBI gene;Acc:424581]
69. SWIP-1 SWIP-1 6024 0.747 - - - - - - - 0.747 - -
70. PROK1 ENSGALG00000040082 34 0.747 - - - 0.747 - - - - - - prokineticin 1 [Source:HGNC Symbol;Acc:HGNC:18454]
71. C1QBP ENSGALG00000001654 34814 0.746 - - - - - - 0.746 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
72. ZDHHC14 ENSGALG00000013695 2648 0.745 - - - - - - - - 0.745 - zinc finger DHHC-type containing 14 [Source:HGNC Symbol;Acc:HGNC:20341]
73. DOCK9 ENSGALG00000016883 128 0.745 - - - 0.745 - - - - - - dedicator of cytokinesis 9 [Source:HGNC Symbol;Acc:HGNC:14132]
74. HSD17B11 ENSGALG00000010979 3104 0.745 - - - - - - 0.745 - - - hydroxysteroid 17-beta dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:22960]
75. PLK1 ENSGALG00000006110 12892 0.744 - - - - - - - 0.744 - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
76. PPP2R2C ENSGALG00000015531 53 0.744 - - - 0.744 - - - - - - protein phosphatase 2 regulatory subunit Bgamma [Source:HGNC Symbol;Acc:HGNC:9306]
77. ANGPTL4 ENSGALG00000000619 1732 0.743 - - - - - - 0.743 - - - angiopoietin like 4 [Source:HGNC Symbol;Acc:HGNC:16039]
78. HAS2 ENSGALG00000029596 4192 0.742 - - - - - - - - 0.742 - hyaluronan synthase 2 [Source:NCBI gene;Acc:395594]
79. PIP4K2B ENSGALG00000001610 49 0.742 - - - 0.742 - - - - - - phosphatidylinositol-5-phosphate 4-kinase type 2 beta [Source:HGNC Symbol;Acc:HGNC:8998]
80. RWDD2B ENSGALG00000015807 3601 0.74 - - - - - - - 0.740 - - RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
81. MEX3A ENSGALG00000014016 3692 0.739 - - - - - - - - 0.739 - mex-3 RNA binding family member A [Source:HGNC Symbol;Acc:HGNC:33482]
82. KDM1A ENSGALG00000033469 20632 0.739 - - - - - - - 0.739 - - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
83. SAFB2 ENSGALG00000001948 10238 0.738 - - - - - - 0.738 - - - scaffold attachment factor B2, transcript variant X6
84. ENSGALG00000012674 ENSGALG00000012674 109 0.738 - - - 0.738 - - - - - -
85. MBSP MBSP 5634 0.736 - - - - - - - - 0.736 -
86. BRD1 ENSGALG00000029379 6047 0.736 - - - - - - - - 0.736 - bromodomain containing 1 [Source:NCBI gene;Acc:417731]
87. NLGN4 NLGN4 283 0.735 - - - - - - - - 0.735 -
88. CCDC80 ENSGALG00000015193 1387 0.734 - - - - - - - - 0.734 - coiled-coil domain containing 80 [Source:NCBI gene;Acc:395074]
89. C1GALT1 ENSGALG00000009752 7148 0.734 - - - - - - - 0.734 - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
90. SRSF1 ENSGALG00000005525 4376 0.733 - - - - - - - 0.733 - - serine and arginine rich splicing factor 1 [Source:NCBI gene;Acc:772264]
91. TMCC2 ENSGALG00000034281 3458 0.733 - - - - - - 0.733 - - - transmembrane and coiled-coil domain family 2 [Source:HGNC Symbol;Acc:HGNC:24239]
92. SLC10A7 ENSGALG00000010006 2064 0.733 - - - - - - - - 0.733 - solute carrier family 10 member 7 [Source:NCBI gene;Acc:422467]
93. PTK2 ENSGALG00000031741 13103 0.731 - - - - - - 0.731 - - - protein tyrosine kinase 2 [Source:NCBI gene;Acc:396416]
94. PLA1A ENSGALG00000014997 152 0.73 - - - 0.730 - - - - - - phospholipase A1 member A [Source:HGNC Symbol;Acc:HGNC:17661]
95. CMTM7 ENSGALG00000011488 1406 0.728 - - - - - - - - 0.728 - CKLF like MARVEL transmembrane domain containing 7 [Source:NCBI gene;Acc:420666]
96. PIDD PIDD 397 0.728 - - - 0.728 - - - - - -
97. HINT3 ENSGALG00000044342 5674 0.728 - - - - - - - 0.728 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
98. ABCC9 ENSGALG00000013244 2153 0.727 - - - - - - - 0.727 - - ATP binding cassette subfamily C member 9 [Source:HGNC Symbol;Acc:HGNC:60]
99. TM4SF18 4553 0.726 - - - - - - - 0.726 - - transmembrane 4 L six family member 18, transcript variant X2
100. FBXW4 ENSGALG00000043428 300 0.726 - - - 0.726 - - - - - - F-box and WD repeat domain containing 4 [Source:HGNC Symbol;Acc:HGNC:10847]

There are 60 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA